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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os01t0713900-01 Rice cytosol 14.5 93.01
Zm00001d043667_P003 Maize endoplasmic reticulum 71.26 85.09
TraesCS3B01G277500.1 Wheat cytosol 80.98 80.95
TraesCS3A01G248800.7 Wheat cytosol 81.06 80.93
TraesCS3D01G248700.2 Wheat cytosol 80.81 80.88
HORVU3Hr1G067400.2 Barley cytosol 61.0 77.57
OQU78360 Sorghum cytosol 61.58 68.37
GSMUA_AchrUn_... Banana cytosol 24.88 66.67
GSMUA_Achr8P26250_001 Banana cytosol 42.48 66.23
EES03165 Sorghum cytosol 42.4 66.19
GSMUA_Achr5P09720_001 Banana cytosol 42.15 64.36
KRH19248 Soybean cytosol 41.01 63.99
KRH02661 Soybean cytosol 40.93 63.86
Solyc07g041150.2.1 Tomato nucleus 40.89 63.83
PGSC0003DMT400053991 Potato cytosol 40.76 63.64
VIT_11s0016g01710.t01 Wine grape cytosol 40.39 63.46
VIT_09s0002g01910.t01 Wine grape cytosol, endoplasmic reticulum, nucleus 40.3 61.75
AT5G20490.2 Thale cress cytosol 39.51 61.59
OQU76115 Sorghum cytosol 38.12 61.45
CDY66597 Canola cytosol 39.13 61.37
Bra006561.1-P Field mustard cytosol 39.51 61.35
AT1G17580.1 Thale cress cytosol 38.96 61.18
Bra020105.1-P Field mustard cytosol 39.04 61.03
CDX70927 Canola cytosol 39.72 60.93
CDX81833 Canola cytosol 37.29 60.75
Bra030993.1-P Field mustard cytosol 38.42 60.73
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 38.42 60.49
CDY45087 Canola cytosol 39.13 60.3
CDY51846 Canola cytosol 39.55 59.71
OQU85951 Sorghum cytosol 35.9 56.34
KXG37557 Sorghum cytosol 35.82 54.95
KXG34975 Sorghum cytosol 32.76 54.23
EER90459 Sorghum cytosol 33.51 53.91
EES05882 Sorghum cytosol 31.38 49.28
OQU91854 Sorghum cytosol 30.71 48.64
KXG32782 Sorghum cytosol 10.93 33.98
EER94044 Sorghum mitochondrion 15.46 30.85
EER99532 Sorghum cytosol 15.33 29.56
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10UniProt:A0A1W0VZ70ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674
GO:GO:0003774GO:GO:0003777GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007015
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0016459
GO:GO:0016787InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_NInterPro:Myosin_head_motor_dom
EnsemblPlants:OQU87414ProteinID:OQU87414ProteinID:OQU87414.1ProteinID:OQU87415.1InterPro:P-loop_NTPasePFAM:PD936484
PFAM:PF00063PFAM:PF01843PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51126
PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF510SMART:SM00015SMART:SM00242
SMART:SM01132EnsemblPlantsGene:SORBI_3003G275700SUPFAM:SSF52540SUPFAM:SSF57997UniParc:UPI0009DC8C59SEG:seg
Description
hypothetical protein
Coordinates
chr3:-:61200801..61224335
Molecular Weight (calculated)
271828.0 Da
IEP (calculated)
5.776
GRAVY (calculated)
-0.598
Length
2387 amino acids
Sequence
(BLAST)
0001: MASMSNIVIG SHVWVEDKDL SWVDGEVFRI DGQNAHVRTT KGKTVTANIS DIHPKDTEAP PDGVDDMTRL SYLHEPGVLD NLAVRYAKNI IYTYTGNILI
0101: AINPFQRLPN LVDARTMEKY KGANLGDLDP HVFAIADVSY RQMINEGKSN SILVSGESGA GKTETTKLLM RYLAFLGGRS GTGERTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKSGKIS GAAIRTYLLE RSRVCQINSP ERNYHCFYFL CAAPSEDLKK YKLGDPSSFH YLNQSACIKV DGINDAEEYL
0301: ATRNAMDTVG ITDQEQEAIF RVVAAVLHLG NINFAKGREV DSSIIKDDKS RFHLNTAGEL LMCDCEKLEN ALINREINTP EGVITTTVGP NSATISRDGL
0401: AKQIYSRLFD WLVNRINASI GQDPDSNKLI GVLDIYGFES FKTNSFEQLC INFTNEKLQQ HFNQNVFKME QEEYTREQIN WSYIEFVDNQ DVLDLIEKKP
0501: GGIIALLDEA CMFPKSTHET LSQKLYEKFK NHKRFTKPKL SRTAFTIQHY AGDVTYQSDQ FLDKNKDYVV AEHQELLNAS KCSFVSGLFP PATEENTKSS
0601: KSSIATRFKV QLHELMETLS STEPHYIRCI KPNSVLKPGI FENTNVLQQL RCSGVLEAIR ISCAGYPTRK QFHDFLHRFR VLAPEILKEK NDEKVSCQKI
0701: LDKMGLQGYQ IGITKVFLRA GQMAELDARR TEMRNNAARG VQSQFRTHVA REQFLVLRDA SICLQSLVRA RLACKQHELL RQQAAALRIQ KNARWYFAWK
0801: TYYQLRLSAI TLQAGLRAMA ARNEFTFRKR NKASVHIQSQ WRCHRDYSNY MKLRRAALTY QCAWRRRVAR KELRKLRMAA RDTQALKVAK EKLEERVEEL
0901: TSRLDREKKL RVDLEKSKAE EVSKLKEALQ EMEQRVEEVK AMQEQESAKK AVEEALAQER EKISLLTTEI EGLKALLVAE REENDVAKKA HANALETNEE
1001: LNKKVSDADE KIKQFSDTVQ RLEGTVREHE ALLLTERQQN EAANAALAES QARNEVLVSK LEDAVKQNDL LHEAAQRFEE ATKNLESSLT FEKQRHEANL
1101: IQLAEAREKI EELQREVGDT DEKSTLLQTS IQSLEERLRE KDALLITERL ESEATKKSLN ESEDRNQDLV MKIEVTEKDI AHFQETVQRH EENMAALETS
1201: LRSERQQNDA IVKQLAESQG EVGELQRKLE DACARNSLLQ DSLQRLEEDA TTREALMVTE RKETEVTKKT LTEALDQIEE LVKEVECANH SVHQLQDSIQ
1301: RLEQTAVARE ATLLTERQEK DATSKALAEA QGRIEGLLKE IYSANRKTDQ LQSTIERLEE GATTTDALYL AERKEHDQTK KSLSEAQETN KELQKKIVEA
1401: EKNIDQLLEN VERLEKDATT RESLLLTTMQ SYDDTTKLLL ESQEKNRELV HKVEESDSKI VLLEDSVKRL EEITADKDSL LAIERHENSE TKKELAGSQK
1501: KIAELLTEVQ DTRANIAELE DSVRRLEGNL AVTEALLLTE KEQNASTLKL LAEAQLRIEE LIKKLEGSDR KSDSLQDTIT RLEQDVTAKE ALLLTEKQAH
1601: EETRKTLTET QEKSEELLKK IHDSDKHILQ LQFTIQRLEE TTVANENLLL REREQNDTTT KAHNESQEKY EELLTKFIDV DRKIDLLQDT IERLGENTTT
1701: KDSLLLSERH EKDAIKKTLT EAEEKNEELL MKVEDANEKI GHLQTTINTL EDNVAAKDVS LEAAMKENDA IRKSLTEAQE RNDELLKKIS DSEYRIHLLQ
1801: DTVQKLQVDA ISRLSSFVME KQESDAAKRA VTEAHERNED LLKRNEDLLK RNDDLIKKIE DSSKIVTQLQ EALQRLEGKA SNLEAENQIL RQQATSTPPS
1901: TAKSPASRLK ISRIHRSPEN GHIFNGDIRQ TEMKPSTGTS EAITSAANVP DLGDQKDFEH GEKLQRIPKQ KYQPSHHQQP QDDQQWLLTC ISQYLGFSGS
2001: KPVAALLIYQ CFLHWKSFEA MKTSVFDNVL HAINSATEAQ NDMRTLAYWL SNLSTLTVLL QRSFKTTRTA ISTPQRRRFS SERIFHGNQT SNAGLAYLSG
2101: QSVVGSAGLP QVEAKYPALL FKQQLVDLIE KVYGMISDSV KKELNPLLEL CIQDPRTSHS SIAKGNLNGM GQQNQLTHWL GIVKILTSYL DVLRANHVPS
2201: ILVHKLFTQI FSLIDVQLFN RLLLRRECCS FSNGEYVRAG LAELKHWSDN ATREFAGSAW EALKHIRQAV DFLVISLKPM RTLREIRTDV CPALSIQQLE
2301: RIVSMYWDDV NGTNTISAEF TSSLKSAVRE ESNMATSFSI LLDDDSSIPF SLDDITKTLP VIEVADDDFL PFVHENPSFA FLLQRGE
Best Arabidopsis Sequence Match ( AT1G17580.1 )
(BLAST)
0001: MAAPVIIVGS HVWVEDPHLA WIDGEVTRID GINVHVKTKK GKTVVTNVYF PKDTEAPSGG VDDMTKLSYL HEPGVLRNLE TRYELNEIYT YTGNILIAVN
0101: PFQRLPHIYE TDMMEQYKGI ALGELSPHVF AIGDAAYRAM INEGKNNSIL VSGESGAGKT ETTKMLMRYL AFLGGRSGVE GRTVEQQVLE SNPVLEAFGN
0201: AKTLRNNNSS RFGKFVEIQF DKNGRISGAA IRTYLLERSR VCQISDPERN YHCFYLLCAA PPEDIKKYKL ENPHKFHYLN QSSCYKLDGV DDASEYLETR
0301: RAMDVVGISN EEQEAIFRVV AAILHLGNID FGKGEEIDSS VIKDKDSRSH LNMAAELLMC NAQSLEDALI RRVMVTPEEI ITRTLDPDNA IASRDTLAKT
0401: IYSHLFDWIV NKINTSIGQD PRSKSIIGVL DIYGFESFKC NSFEQFCINF TNEKLQQHFN QHVFKMEQEE YTKEEIAWSY IEFIDNQDVL ELIEKKPGGI
0501: ISLLDEACMF PKSTHETFSQ KLFQTFKEHE RFAKPKLSRT DFTISHYAGE VTYQSNHFID KNKDYIVAEH QALFTASNCK FVAGLFHALH EDSSRSSKFS
0601: SIGSRFKQQL HSLMESLNGT EPHYIRCIKP NNVLKPGIFE NFNVIHQLRC GGVLEAIRIS CAGYPTRLAF YDFLDRFGLL APEVLEGNYD DKVACQMILD
0701: KKSLTDYQIG KTKIFLRAGQ MAELDARRAE VLGNAARVIQ RQFRTCMARK NYRSIRNAAI VLQSFLRGEI ARAVHKKLRI EAAALRVQKN FRRYVDRKSF
0801: VTTRSSTIVL QTGLRAMIAR SEFRLRRQRK AAIVLQAHWR GRQAFSYYTR LQKAAIVTQC AWRCRLARRE LRMLKMAARD TGALKDAKNK LEQRVEELSL
0901: RLHLEKRLRT DLEEAKVQEV AKLQEALHTM RLQLKETTAM VVKEQEAARV AIEEASSVNK EPVVVEDTEK IDSLSNEIDR LKGLLSSETH KADEAQHAYQ
1001: SALVQNEELC KKLEEAGRKI DQLQDSVQRF QEKVFSLESE NKVLRQQTLT ISPTTRALAL RPKTTIIQRT PEKDTFSNGE TTQLQEPETE DRPQKSLNQK
1101: QQENQELLLK SISEDIGFSE GKPVAACLIY KCLIHWRSFE VERTSIFNRI IETIASAIEM QENSDVLCYW LSNSATLLMF LQRTLKAGAT GSITTPRRRG
1201: MPSSLFGRVS QSFRGSPQSA GFPFMTGRAI GGGLDELRQV EAKYPALLFK QQLTAFLEKI YGMIRDKMKK EISPLLASCI QVPRTPRSGL VKGRSQNTQN
1301: NVVAPKPMIA HWQNIVTCLN GHLRTMRANY VPSLLISKVF GQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KTGLAELEKW CHDATEEFVG SAWDELKHIR
1401: QAVGFLVIHQ KPKKSLKEIT TELCPVLSIQ QLYRISTMYW DDKYGTHSVS TEVIATMRAE VSDVSKSAIS NSFLLDDDSS IPFSLDDISK SMQNVEVAEV
1501: DPPPLIRQNS NFMFLLERSD
Arabidopsis Description
XI-1Myosin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q39160]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.