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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d052110_P011 Maize cytosol 95.53 95.53
TraesCS6B01G367000.1 Wheat cytosol 84.8 86.11
TraesCS6D01G316500.1 Wheat cytosol 84.67 85.97
TraesCS6A01G336500.1 Wheat cytosol 84.67 85.97
HORVU6Hr1G081340.4 Barley cytosol 84.93 84.93
Os02t0777700-00 Rice cytosol 39.54 82.44
Os10t0339400-01 Rice cytosol 38.82 80.93
Solyc08g061520.2.1 Tomato cytosol 23.29 76.29
CDX68955 Canola cytosol 25.46 74.42
VIT_04s0008g01990.t01 Wine grape cytosol 70.59 70.41
KRH15597 Soybean cytosol 68.55 68.46
GSMUA_Achr3P07960_001 Banana cytosol 72.5 67.36
KRH61584 Soybean cytosol 67.11 66.93
KRH52257 Soybean cytosol 66.84 66.8
Bra011426.1-P Field mustard cytosol 65.13 65.26
AT4G33200.4 Thale cress cytosol 65.13 65.0
CDY46128 Canola cytosol 63.75 64.51
CDX72393 Canola cytosol 63.82 64.41
Bra037016.1-P Field mustard cytosol 63.75 64.34
OQU91854 Sorghum cytosol 62.3 62.84
CDY69448 Canola extracellular, golgi, mitochondrion 13.42 61.82
Solyc08g061500.1.1 Tomato cytosol 42.24 61.61
CDX75338 Canola cytosol 64.41 59.08
OQU76115 Sorghum cytosol 53.22 54.63
EES03165 Sorghum cytosol 54.67 54.35
OQU85951 Sorghum cytosol 52.5 52.47
EER90459 Sorghum cytosol 50.59 51.82
KXG34975 Sorghum cytosol 49.14 51.8
KXG37557 Sorghum cytosol 52.04 50.84
CDY69853 Canola endoplasmic reticulum 15.46 48.65
KXG32782 Sorghum cytosol 16.78 33.2
EER94044 Sorghum mitochondrion 25.59 32.53
OQU78360 Sorghum cytosol 45.2 31.95
EER99532 Sorghum cytosol 25.72 31.58
OQU87414 Sorghum cytosol 49.28 31.38
CDX72394 Canola nucleus 0.26 0.4
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10EntrezGene:8082670UniProt:C5XTK8ncoils:CoilInterPro:Dilute_domEnsemblPlants:EES05882
ProteinID:EES05882ProteinID:EES05882.1GO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007015GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0016459GO:GO:0016787GO:GO:0051015
InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_NInterPro:Myosin_S1_N
InterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612PFAM:PF01843PRINTS:PR00193
PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF534
SMART:SM00015SMART:SM00242SMART:SM01132EnsemblPlantsGene:SORBI_3004G317300SUPFAM:SSF52540unigene:Sbi.14443
UniParc:UPI0001A85A3CRefSeq:XP_002452906.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:+:65318890..65336694
Molecular Weight (calculated)
173139.0 Da
IEP (calculated)
8.711
GRAVY (calculated)
-0.351
Length
1520 amino acids
Sequence
(BLAST)
0001: MSFRKGLKVW VEEKGEGWVE AEVAEAKERA VVVLTSQRKK ITVSPEKLLP RDTDEDLGGG HVDDMTKLTY LNEPGVLYNL KKRYALNEIY TYTGSILIAV
0101: NPFTRLPHLY NEYMMEQYKG IRLGELSPHV FAVADASYRA MVNDSRSQSI LVSGESGAGK TETTKLIMQY LTFVGGRAAL DDRTVEQQVL ESNPLLEAFG
0201: NAKTVRNDNS SRFGKFVEIQ FDGSGRISGA AIRTYLLERS RVVQITDPER NFHCFYQLCA SGKDAELYKL GHASSFHYLN QSNTYDLEGT NNEDEYWKTK
0301: RAMDIVGISR EDQDAIFRTL AAILHLGNIE FAPGKDTDSS KIKDSTSNFH LQTAAKLFMC DSDLLVSTLC SRSIHTREGI IVKALDCAAA AANRDALAKT
0401: VYARLFDWLV ENINKSIGQD VDSKVQIGVL DIYGFESFKN NSFEQFCINF ANEKLQQHFN EHVFKMEQEE YKSEEINWSY IEFIDNQDVL DLIEKKPIGI
0501: IALLDEACMF PKSTHETFAT KMFRNFSSHP RLEKTKFSET DFTISHYAGK VTYQTDSFLE KNRDYIVAEH CNLLSSSRCP FVSGLFTSLP EESIRSSYKF
0601: SSVASRFKLQ LQALMETLNS TEPHYVRCVK PNSANRPQLF ENQSVLHQLR CGGVLEAVRI SLAGYPTRRT YAEFVDRFAV LVPELMIGSY DERMLTKGIL
0701: EKMELENFQL GRTKVFLRAG QIAILDMRRA EVLDNAARHI QGRFRTFITR KEFVKTREAS VSVQAYCRGC LARKMYAIRR ETAAAVIVQK YVRRWILRRA
0801: HLQACLAALL IQSYIRGFIA RRYFSAIREH KAATVIQSIW RRRKVVMLFQ NCRQAAVTIQ CSWRQKLARK ELRRLKMAAN EAGALREAKN KLEKKMDDLA
0901: LRLTLERRLR AASEDSKSAE ILRRDKIIES LSAECAAAKS AAQNEHDKNL LLQKQLDDSL REIAMLQSKK IMSAEAEKEN SNLKNLVESL SMKNSILENE
1001: LTVTRKSSDD TMEKLKDVEG KCNHLQQNLD KLQEKLTNLE NENHVLRQKA FNMPTMNNLP VAPKTLSEKF SASIGLPISE PKHIYESPTP TKYLASLPQS
1101: LSASRRSRLP VERHEQNHEI LLKCIKENLG YKDGKPVAAC IIYKCLLHWR AFESERTAIF DHVIEAINDV LKGTEADGRL PYWLSNTSAL LCLLQRNLRS
1201: NGLFATPSRR SGGAIGKIAQ TLRSPSKFVG RSDTLPQVDA RYPAILFKQQ LTACVEKIFG QLRDNLKKEI SPLLNLCIQA PKSTRGQPGK TSKSPGVGAH
1301: LASNSNWDNI VNFLDLLMDT LRENYVPSFF IRKLITQLFS FINIQLFNSL LLRRECCTFS NGEYVKAGLS LLEKWITDVT EEFAGTSWHE LNYIREAVGF
1401: LVIHQKRKKT LQEIRQDLCP SLSVRQIYRI CSMYWDDKYN TQGISTEVVA AMREVVNKDT QNLLSNSFLL DDDLSIPFST EDLSMAIPAI DYADVDLPEC
1501: LQHYTSVQFL IRQQDLQPAQ
Best Arabidopsis Sequence Match ( AT4G33200.1 )
(BLAST)
0001: MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT
0101: GSILIAVNPF KKLPHLYNGH MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF VGGRATDDDR SVEQQVLESN
0201: PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA
0301: EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS
0401: RDTLAKTVYA HLFDWLVDKI NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK EEINWSYIEF IDNQDVLDLI
0501: EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES
0601: TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ
0701: ALTEKILSKL GLGNYQLGRT KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR NAYATRRNAA AAVLVQKHVR
0801: RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE
0901: KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK
1001: NRVLEKELLN AKTNCNNTLQ KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVLMQKTLIT SPERIGQILG EKHSSAVVPA QNDRRSVFET PTPSKHIMPF
1101: SHSLSESRRS KLTAERNLEN YELLSRCIKE NLGFNDDKPL AACVIYKCLL HWRAFESEST AIFNIIIEGI NEALKGGDEN GVLPYWLSNA SALLCLLQRN
1201: LRSNSFLNAS AQRSGRAAYG VKSPFKLHGP DDGASHIEAR YPALLFKQQL TACVEKIYGL IRDNLKKELS PLLGSCIQAP KASRGIAGKS RSPGGVPQQS
1301: PSSQWESILK FLDSLMSRLR ENHVPSFFIR KLVTQVFSFI NLSLFNSLLL RRECCTFSNG EYVKSGISEL EKWIANAKEE FAGTSWHELN YIRQAVGFLV
1401: IHQKKKKSLD EIRQDLCPVL TIRQIYRIST MYWDDKYGTQ SVSSEVVSQM RVLVDKDNQK QTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS
1501: EYTCAQSLVK KPSIASTSKQ II
Arabidopsis Description
XI-Imyosin, putative [Source:TAIR;Acc:AT4G33200]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.