Factsheet for VIT_04s0008g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g061520.2.1	Tomato	cytosol	25.13	82.54
CDX68955	Canola	cytosol	27.56	80.77
KRH15597	Soybean	cytosol	78.54	78.65
KRH61584	Soybean	cytosol	77.49	77.49
KRH52257	Soybean	cytosol	77.23	77.38
Solyc08g061500.1.1	Tomato	cytosol	51.51	75.34
AT4G33200.4	Thale cress	cytosol	75.13	75.18
Bra011426.1-P	Field mustard	cytosol	74.54	74.88
Zm00001d014239_P001	Maize	cytosol	24.28	74.15
CDY46128	Canola	cytosol	72.64	73.7
Os10t0395150-00	Rice	plasma membrane	26.31	73.58
Bra037016.1-P	Field mustard	cytosol	72.64	73.51
CDX72393	Canola	cytosol	72.64	73.51
CDY69448	Canola	extracellular, golgi, mitochondrion	15.42	71.21
Zm00001d052110_P011	Maize	cytosol	70.8	70.99
TraesCS6D01G316500.1	Wheat	cytosol	69.62	70.88
TraesCS6B01G367000.1	Wheat	cytosol	69.62	70.88
TraesCS6A01G336500.1	Wheat	cytosol	69.49	70.74
EES05882	Sorghum	cytosol	70.41	70.59
HORVU6Hr1G081340.4	Barley	cytosol	69.95	70.13
GSMUA_Achr3P07960_001	Banana	cytosol	73.49	68.46
CDX75338	Canola	cytosol	73.62	67.71
OQU91854	Sorghum	cytosol	64.37	65.1
Os10t0395100-01	Rice	cytosol	19.62	62.16
CDY69853	Canola	endoplasmic reticulum	19.62	61.9
Os02t0777700-00	Rice	cytosol	28.87	60.36
Os10t0339400-01	Rice	cytosol	28.54	59.67
VIT_14s0081g00160.t01	Wine grape	cytosol	55.25	55.29
VIT_00s0268g00030.t01	Wine grape	cytosol	16.08	55.06
VIT_11s0016g01710.t01	Wine grape	cytosol	54.66	54.84
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.59	54.81
VIT_05s0051g00050.t01	Wine grape	cytosol	52.49	53.76
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	54.27	53.08
VIT_07s0005g02970.t01	Wine grape	cytosol	39.76	53.02
VIT_16s0115g00220.t01	Wine grape	cytosol	9.19	52.43
Zm00001d014241_P001	Maize	mitochondrion	17.06	52.31
VIT_13s0320g00070.t01	Wine grape	cytosol	51.57	50.51
VIT_04s0079g00370.t01	Wine grape	cytosol	12.86	47.69
VIT_14s0030g02000.t01	Wine grape	cytosol	0.46	43.75
VIT_10s0071g00210.t01	Wine grape	plastid	26.25	33.9
VIT_19s0014g03640.t01	Wine grape	cytosol	25.07	31.91
CDX72394	Canola	nucleus	0.46	0.71

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100254166	wikigene:100254166	Gene3D:2.30.30.360
MapMan:20.2.4.1	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	ProteinID:CBI20729	ProteinID:CBI20729.3	ncoils:Coil
UniProt:D7STY0	InterPro:Dilute_dom	EMBL:FN595231	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR008989
InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100254166	wikigene:LOC100254166	InterPro:MYSc_Myo11
InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063
PFAM:PF00612	PFAM:PF01843	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456
PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF534	SMART:SM00015	SMART:SM00242	SMART:SM01132
SUPFAM:SSF52540	UniParc:UPI0001BE1BD4	ArrayExpress:VIT_04s0008g01990	EnsemblPlantsGene:VIT_04s0008g01990	EnsemblPlants:VIT_04s0008g01990.t01	RefSeq:XP_002281615
RefSeq:XP_002281615.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:1596779..1632413

Molecular Weight (calculated)

173745.0 Da

IEP (calculated)

8.918

GRAVY (calculated)

-0.355

Length

1524 amino acids

Sequence
(BLAST)

0001: MSLRKGSKVW VEDRELAWVA AEVVDFVGKQ VQVVTASRKK VWASNEKLLP RDPDAEDHGG VDDMTKLTYL NEPGVLYNLE IRYALNDIYT YTGSILIAVN
0101: PFTKLPHLYN VHMMEQYKGA QFGVLSPHVF AVADASYRAM MNEARSQSIL VSGESGAGKT ETTKLIMQYL TYVGGRAAGD DRTVEQQVLE SNPLLEAFGN
0201: AKTVRNDNSS RFGKFVEIQF DANGRISGAA IRTYLLERSR VVQITDPERN YHCFYQLCAS GRDAEKYKLG KPDNFHYLNQ SKSYELEGVS NGEEYMKTRR
0301: AMGIVGISHD DQEAIFRTLA AILHLGNVEF SPGKEHDSSV LKDQKSNFHI QMAADLFMCD VNLLRATLCT RTIQTREGDI IKALDCNAAV ASRDALAKTV
0401: YAKLFDWLVE KVNRSVGQDL NSRVQIGVLD IYGFECFKHN SFEQFCINFA NEKLQQHFNE HVFKMEQEEY SKEEINWSYI EFIDNQDVLD LIEKKPIGII
0501: ALLDEACMFP KSTHKTFSTK LFQNLQTHQR LEKAKFSETD FTISHYAGKA CHISITVTYQ TDTFLDKNRD YVVVEHCNLL SSSKCPFVAG LFPSMPEESS
0601: RSSYKFSSVG SRFKQQLQAL METLNSTEPH YIRCVKPNSL NRPQKFESQS ILHQLRCGGV LEAVRISLAG YPTRRNYSEF VDRFGLLVPE LMDGSFDERT
0701: TTEKILLKLK LENFQLGKTK VFLRAGQIGV LDSRRAEVLD SAAKHIQGRF RTFIAHRDFV SIRAAAFALQ AYCRGCHARN IYAAKRQAAA ALLLQKYVRR
0801: WLLRNAYMQL YSASVLLQSS IRGFSIRQRF LYQKKHRAAT RIQAQWRMCK VRSIFRNRQG SIIAIQCRWR QKLAKRELRK LKQEANEAGF LRLAKNKLEK
0901: QLEDLTWRLQ LEKRLRVSNE EAKSVEISKL KKALGTLNLE LDAAKLVTVN ECNKNAVLQN QLDLSFKEKS ALERELIGMT ELRKENAFLK SSLESLEKKN
1001: SELEFELIKG QKDRKDTLEK LHEVEQKCLQ FQQNLQSLEE KLSSLEDENH VLRQKALTPS PKSNHPGFVK SFSEKYTGPL ALAQSDRKPV FESPTPTKLI
1101: VPFSHTLSES RRSKFAIERH PENHDFLSSC IKADLGFKEG KPVAACIIYK CLLHWHAFES ERTAIFDHII EGINEVLKVG DENIALPYWL SNASALLCLL
1201: QRNLRSNGFL TTISQRSGGS SGITGRVAQS LKSPFKYIGF DDSMSHVEAR YPAILFKQQL TACVEKIFGL IRDNLKKEIS PLLGSCIQAP KTVRLHAGKS
1301: ARSPGGLPQQ SQSSQWDSII KFLDSLMDRL LGNHVPSFFI RKLITQVFSF INISLFNSLL LRRECCTFSN GEYVKSGLAD LEKWIASVTE EFAGTSWHEL
1401: NYIRQAVGFL VIHQKRKKSL EEIMQDLCPA LTVRQIYRIS TMYWDDKYGT QSVSNEVVAQ MRDMLNKDNQ NLTSNSFLLD DDLSIPFSTE DIYMAIPPMD
1501: PSDVELPPFL SEHPSVQFLI LHPK

Best Arabidopsis Sequence Match ( AT4G33200.1 )
(BLAST)

0001: MRNCLPMELN LRKGDKVWVE DKDLAWIAAD VLDSFDNKLH VETSTGKKVF VSPEKLFRRD PDDEEHNGVD DMTKLTYLHE AGVLYNLQRR YALNDIYTYT
0101: GSILIAVNPF KKLPHLYNGH MMEQYMGAPF GELSPHVFAV SDVAYRAMID DSRSQSILVS GESGAGKTET TKLIMQYLTF VGGRATDDDR SVEQQVLESN
0201: PLLEAFGNAK TVRNDNSSRF GKFVEIQFDT NGRISGAAIR TYLLERSRVV RITDPERNYH CFYQLCASGN DAEKYKLSNP RQFHYLNQSK TYELEGVSSA
0301: EEYKNTRRAM DIVGISQDEQ EGIFRTLAAI LHLGNVEFSS GREHDSSVVK DPESRHHLQM AADLFKCDAN LLLASLCTRS ILTREGIIIK ALDPNAAVTS
0401: RDTLAKTVYA HLFDWLVDKI NKSVGQDPES RFQIGVLDIY GFECFKNNSF EQFCINFANE KLQQHFNEHV FKMEQDEYRK EEINWSYIEF IDNQDVLDLI
0501: EKKPIGVIAL LDEACMFPRS THESFSMKLF QNFRFHPRLE KPKFSETDFT LSHYAGKVTY QTEAFLDKNR DYTIVEHCNL LSSSKCPFVA GIFPSAPEES
0601: TRSSYKFSSV SSRFKQQLQA LMETLSKTEP HYVRCVKPNS LNRPQKFESL SVLHQLRCGG VLEAVRISLA GYPTRRNYSD FVDRFGLLAP EFMDESNDEQ
0701: ALTEKILSKL GLGNYQLGRT KVFLRAGQIG ILDSRRAEVL DASARLIQRR LRTFVTHQNF ISARASAISI QAYCRGCLSR NAYATRRNAA AAVLVQKHVR
0801: RWLSRCAFVK LVSAAIVLQS CIRADSTRLK FSHQKEHRAA SLIQAHWRIH KFRSAFRHRQ SSIIAIQCRW RQKLAKREFR KLKQVANEAG ALRLAKTKLE
0901: KRLEDLEWRL QLEKRLRTSG EEAKSSEISK LQKTLESFSL KLDAARLATI NECNKNAVLE KQLDISMKEK SAVERELNGM VELKKDNALL KNSMNSLEKK
1001: NRVLEKELLN AKTNCNNTLQ KLKEAEKRCS ELQTSVQSLE EKLSHLENEN QVLMQKTLIT SPERIGQILG EKHSSAVVPA QNDRRSVFET PTPSKHIMPF
1101: SHSLSESRRS KLTAERNLEN YELLSRCIKE NLGFNDDKPL AACVIYKCLL HWRAFESEST AIFNIIIEGI NEALKGGDEN GVLPYWLSNA SALLCLLQRN
1201: LRSNSFLNAS AQRSGRAAYG VKSPFKLHGP DDGASHIEAR YPALLFKQQL TACVEKIYGL IRDNLKKELS PLLGSCIQAP KASRGIAGKS RSPGGVPQQS
1301: PSSQWESILK FLDSLMSRLR ENHVPSFFIR KLVTQVFSFI NLSLFNSLLL RRECCTFSNG EYVKSGISEL EKWIANAKEE FAGTSWHELN YIRQAVGFLV
1401: IHQKKKKSLD EIRQDLCPVL TIRQIYRIST MYWDDKYGTQ SVSSEVVSQM RVLVDKDNQK QTSNSFLLDD DMSIPFSAED IDKAIPVLDP SEIEPPKFVS
1501: EYTCAQSLVK KPSIASTSKQ II

Arabidopsis Description

XI-Imyosin, putative [Source:TAIR;Acc:AT4G33200]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.