Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_08s0032g00720.t01 | |
| VIT_09s0002g01910.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17580.1 | VIT_09s0002g01910.t01 | AT1G17580.1 | 18429938 |
| AT1G17580.1 | VIT_08s0032g00720.t01 | AT5G06560.1 | 23995081 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g01710.t01 | Wine grape | cytosol | 80.55 | 82.62 |
| GSMUA_Achr8P26250_001 | Banana | cytosol | 79.01 | 80.41 |
| GSMUA_Achr5P09720_001 | Banana | cytosol | 79.78 | 79.53 |
| Os01t0713900-01 | Rice | cytosol | 18.81 | 78.76 |
| EES03165 | Sorghum | cytosol | 77.28 | 78.74 |
| Zm00001d044303_P003 | Maize | plasma membrane | 76.96 | 78.42 |
| Os03t0686300-00 | Rice | plasma membrane | 77.41 | 77.96 |
| TraesCS3A01G209500.1 | Wheat | cytosol | 75.8 | 77.49 |
| HORVU3Hr1G050290.1 | Barley | cytosol | 75.87 | 77.31 |
| TraesCS3B01G239700.1 | Wheat | cytosol, golgi | 75.8 | 77.24 |
| TraesCS3D01G212400.3 | Wheat | cytosol | 75.74 | 77.17 |
| Os05t0537200-01 | Rice | cytosol, plasma membrane | 18.1 | 75.81 |
| VIT_14s0081g00160.t01 | Wine grape | cytosol | 74.01 | 75.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.13 | 75.42 |
| AT1G17580.1 | Thale cress | cytosol | 72.72 | 74.54 |
| Bra030993.1-P | Field mustard | cytosol | 71.95 | 74.24 |
| CDX81833 | Canola | cytosol | 69.77 | 74.2 |
| CDY21744 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.02 | 74.01 |
| Zm00001d038844_P001 | Maize | cytosol | 29.33 | 72.54 |
| VIT_00s0268g00030.t01 | Wine grape | cytosol | 19.38 | 67.87 |
| VIT_07s0005g02970.t01 | Wine grape | cytosol | 49.61 | 67.63 |
| VIT_07s0005g04790.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 63.8 | 65.48 |
| VIT_05s0051g00050.t01 | Wine grape | cytosol | 61.75 | 64.65 |
| VIT_13s0320g00070.t01 | Wine grape | cytosol | 64.18 | 64.27 |
| VIT_16s0115g00220.t01 | Wine grape | cytosol | 10.33 | 60.3 |
| VIT_04s0008g01990.t01 | Wine grape | cytosol | 53.08 | 54.27 |
| VIT_04s0079g00370.t01 | Wine grape | cytosol | 13.93 | 52.8 |
| VIT_14s0030g02000.t01 | Wine grape | cytosol | 0.51 | 50.0 |
| Os05t0537300-01 | Rice | cytosol, mitochondrion, peroxisome | 10.65 | 46.24 |
| TraesCS1B01G375000.1 | Wheat | cytosol | 59.24 | 43.09 |
| HORVU1Hr1G080240.9 | Barley | cytosol | 59.37 | 43.08 |
| TraesCS1D01G363400.1 | Wheat | cytosol | 59.11 | 42.86 |
| TraesCS1A01G358500.1 | Wheat | cytosol | 56.55 | 42.29 |
| OQU78360 | Sorghum | cytosol | 56.68 | 41.07 |
| TraesCS3A01G248800.7 | Wheat | cytosol | 62.13 | 40.49 |
| TraesCS3B01G277500.1 | Wheat | cytosol | 62.0 | 40.45 |
| TraesCS3D01G248700.2 | Wheat | cytosol | 61.81 | 40.38 |
| OQU87414 | Sorghum | cytosol | 61.75 | 40.3 |
| Zm00001d011713_P003 | Maize | endoplasmic reticulum | 58.41 | 38.48 |
| Zm00001d043667_P003 | Maize | endoplasmic reticulum | 46.41 | 36.17 |
| VIT_10s0071g00210.t01 | Wine grape | plastid | 25.74 | 33.98 |
| Zm00001d038845_P002 | Maize | nucleus | 29.46 | 32.46 |
| VIT_19s0014g03640.t01 | Wine grape | cytosol | 24.65 | 32.08 |
| HORVU3Hr1G067400.2 | Barley | cytosol | 36.39 | 30.21 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ProteinID:CCB59329 | ProteinID:CCB59329.1 | ncoils:Coil | InterPro:Dilute_dom | UniProt:F6HY06 |
| EMBL:FN596494 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003779 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016787 |
| InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS |
| InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N | InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase |
| PFAM:PF00063 | PFAM:PF00612 | PFAM:PF01843 | PFAM:PF02736 | PRINTS:PR00193 | PFscan:PS50096 |
| PFscan:PS51126 | PFscan:PS51456 | PFscan:PS51844 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF510 | SMART:SM00015 |
| SMART:SM00242 | SMART:SM01132 | SUPFAM:SSF52540 | TMHMM:TMhelix | UniParc:UPI0002109F9F | ArrayExpress:VIT_09s0002g01910 |
| EnsemblPlantsGene:VIT_09s0002g01910 | EnsemblPlants:VIT_09s0002g01910.t01 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr9:+:1670135..1691888
Molecular Weight (calculated)
176960.0 Da
IEP (calculated)
8.481
GRAVY (calculated)
-0.306
Length
1558 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSDGRDSEAD SCPHVRRLSS FLPITIFLFI YLLLIFLFLN IYIYIFYCCV LKYLTSQQRW RGYPLHTLCL LKIRIDLLES MAAPVNIVVG SHVWVEDPVE
0101: AWIDGEVSRI NGLEVHVHTT KGKTVVANIS KVFPKDTEAP PGGVDDMTKL SYLHEPGVLQ NLAARYELNE IYTYTGNILI AINPFQRLPH LYDTHMMEQY
0201: KGAGFGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAHLGGRS GVEGRTVEQQ VLESNPVLEA FGNAKTVRNN NSSRFGKFVE
0301: IQFDKSGRIS GAAVRTYLLE RSRVCQISTP ERNYHCFYLL CAAPPEEIER YKLGNPRTFH YLNQSNCYEL DGVNDGHEYL ATRRAMDIVG ISEQEQEAIF
0401: RVVAAILHLG NINFAKGKEI DSSVIKDEQS RFHLNMTAEL LKCDAQSLED ALIKRVMVTP EEIITRTLDP VNAIGSRDAL AKTIYSRLFD WLVDKINNSI
0501: GQDPNSKSII GVLDIYGFES FKCNSFEQFC INYTNEKLQQ HFNQHVFKME QEEYTKEEIN WSYIEFVDNQ DVLDLIEKKP GGIISLLDEA CMFPKSTHET
0601: FAQKLYQTFK NNKRFIKPKL SRTDFTISHY AGEVNYQANL FLDKNKDYVV AEHQALLTAS NCPFVVSLFP AQSEETSKSS KFSSIGSRFK LQLQSLMETL
0701: SATEPHYIRC VKPNNVLKPA IFENANIIQQ LRCGGVLEAI RISCAGYPTR RTFYEFLHRF GVLAPEVLEG NYDDKTACIM ILDKKGLKGY QVGKTKVFLR
0801: AGQMAELDAR RAEVLGNAAR TIQRQIRTYI ARKEFISLRK AAIQMQSYWR GRMACKLYEQ LRREAAALKI QKNFRRYIAR KSYLTVRSSA ITLQTGLRAM
0901: TARNEFRFRK QTKAAIIIQA HWRCHQAYSY YKSLQKAIIV TQCSWRCRVA RRELRKLKMA ARETGALKEA KDKLEKRVEE LTWRLQLEKR LRVDLEEAKA
1001: QETAKLQETL HAMQLQIEEA NVMVIREREA ARKAIEEAPP VIKETPVIVQ DTEKVDSLTA EVERLKASLL SQTQAAEEAK QACAAAQAQN EELTTKLGDA
1101: EKKVDQLQDS VQRLEEKLSN LESENQVLRQ QALAISPTAK ALSARPKTPI LQRTPENGNV LNGEAKKQLD SSLALSSPRE PESEEKPQKS LNEKQQENQD
1201: LLIKCISQDL GFSGGRPIAA CLIYKSLLQW RSFEVERTSV FDRIIQTIGA AIEGLRASPQ SAGFSFLNGR VLGGLDDLRQ VEAKYPALLF KQQLTAFLEK
1301: IYGMIRDNLK KEISPLLGLC IQAPRTSRAS LVKGRSQANA VAQQALIAHW QSIVKSLNYY LKIMKANHVP PFLVRKVFTQ IFSFINVQLF NSLLLRRECC
1401: SFSNGEFVKT GLAELENWCH EATEEYAGSA WDELRHIRQA VGFLVIHQKP KKTLKEITND LCPVLSIQQL YRISTMYWDD KYGTHSVSSD VISSMRVMMT
1501: EDSNNAVSSS FLLDDDSSIP FTVDDISKTM QQIEVSDIDP PPLIRENSGF SFLLPRAE
0101: AWIDGEVSRI NGLEVHVHTT KGKTVVANIS KVFPKDTEAP PGGVDDMTKL SYLHEPGVLQ NLAARYELNE IYTYTGNILI AINPFQRLPH LYDTHMMEQY
0201: KGAGFGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAHLGGRS GVEGRTVEQQ VLESNPVLEA FGNAKTVRNN NSSRFGKFVE
0301: IQFDKSGRIS GAAVRTYLLE RSRVCQISTP ERNYHCFYLL CAAPPEEIER YKLGNPRTFH YLNQSNCYEL DGVNDGHEYL ATRRAMDIVG ISEQEQEAIF
0401: RVVAAILHLG NINFAKGKEI DSSVIKDEQS RFHLNMTAEL LKCDAQSLED ALIKRVMVTP EEIITRTLDP VNAIGSRDAL AKTIYSRLFD WLVDKINNSI
0501: GQDPNSKSII GVLDIYGFES FKCNSFEQFC INYTNEKLQQ HFNQHVFKME QEEYTKEEIN WSYIEFVDNQ DVLDLIEKKP GGIISLLDEA CMFPKSTHET
0601: FAQKLYQTFK NNKRFIKPKL SRTDFTISHY AGEVNYQANL FLDKNKDYVV AEHQALLTAS NCPFVVSLFP AQSEETSKSS KFSSIGSRFK LQLQSLMETL
0701: SATEPHYIRC VKPNNVLKPA IFENANIIQQ LRCGGVLEAI RISCAGYPTR RTFYEFLHRF GVLAPEVLEG NYDDKTACIM ILDKKGLKGY QVGKTKVFLR
0801: AGQMAELDAR RAEVLGNAAR TIQRQIRTYI ARKEFISLRK AAIQMQSYWR GRMACKLYEQ LRREAAALKI QKNFRRYIAR KSYLTVRSSA ITLQTGLRAM
0901: TARNEFRFRK QTKAAIIIQA HWRCHQAYSY YKSLQKAIIV TQCSWRCRVA RRELRKLKMA ARETGALKEA KDKLEKRVEE LTWRLQLEKR LRVDLEEAKA
1001: QETAKLQETL HAMQLQIEEA NVMVIREREA ARKAIEEAPP VIKETPVIVQ DTEKVDSLTA EVERLKASLL SQTQAAEEAK QACAAAQAQN EELTTKLGDA
1101: EKKVDQLQDS VQRLEEKLSN LESENQVLRQ QALAISPTAK ALSARPKTPI LQRTPENGNV LNGEAKKQLD SSLALSSPRE PESEEKPQKS LNEKQQENQD
1201: LLIKCISQDL GFSGGRPIAA CLIYKSLLQW RSFEVERTSV FDRIIQTIGA AIEGLRASPQ SAGFSFLNGR VLGGLDDLRQ VEAKYPALLF KQQLTAFLEK
1301: IYGMIRDNLK KEISPLLGLC IQAPRTSRAS LVKGRSQANA VAQQALIAHW QSIVKSLNYY LKIMKANHVP PFLVRKVFTQ IFSFINVQLF NSLLLRRECC
1401: SFSNGEFVKT GLAELENWCH EATEEYAGSA WDELRHIRQA VGFLVIHQKP KKTLKEITND LCPVLSIQQL YRISTMYWDD KYGTHSVSSD VISSMRVMMT
1501: EDSNNAVSSS FLLDDDSSIP FTVDDISKTM QQIEVSDIDP PPLIRENSGF SFLLPRAE
0001: MVGPVNIIVG SHVWIEDPGA AWIDGEVVKI NGEEVHAHTT NGKTVVANIA NVFPKDTEAP PGGVDDMTKL SYLHEPGVLN NLAMRYELNE IYTYTGNILI
0101: AVNPFQRLPH LYDTHMMEQY KGAGFGELSP HVFAIAEVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRS GVEGRTVEQQ VLESNPVLEA
0201: FGNAKTLRNN NSSRFGKFVE LQFDNCGRIS GAAVRTYLLE RSRVCQISDP ERNYHCFYLL CAAPPEEREK FKLGDPKLFH YLNQSKCYKL DGVDDTEEYL
0301: ATRRAMDIVG ISEEEQDAIF RVVAAILHLG NVNFAKGKEI DSSVLKDEKS RYHLDVCAEL LRCDAKKMED ALIKRVMVTP EEVITRTLDP DSATGSRDAL
0401: AKTIYSRLFD WLVDKINNSI GQDPNSKTII GVLDIYGFES FKINSFEQFC INFTNEKLQQ HFNQHVFKME QEDYTKEEIN WSYIEFVDNK DVLELIEKKP
0501: GGVIALLDEA CMFPKSTHET FAQKLYQTFK NYKRFTKPKL SRTSFAISHY AGEVTYQADL FLDKNKDYVV AEHQDLLIAS SDTFVAGLFP RLPEETSSKT
0601: KFSSIGSRFK LQLQSLMETL SSTEPHYIRC VKPNNVLKPA IFENVNVIQQ LRCGGVLEAI RISCAGYPTK RTFYEFLNRF GVLAPEVLEG NYDDKVACKM
0701: LLDKIGLKGY ELGKTKVFLR AGQMAELDAR RAEVLGNAAR RIQRQSRTFI ACKEFRALRG AAIVLQSNCR GKLACNLYEE MRRQAAAVKI QKIFRRHIAR
0801: ESYLRIRHST ITVQTALRGM VARNEFRFRK QMKAATIIQA RLRSHLTHSY YKQLQKAALS TQCGWRSRVA RKELRTLKMA ARDTGALREA KDKLEKRVEE
0901: LTWRLQLEKR QRTELEEAKT QEYAKQQEAL ETMRLQVEEA NAAVIREREA ARKAIEEAPP VIKETPVLVE DTEKINSLTS EVEALKASLQ AERQAAENLR
1001: KAFSEAEARN SELATELENA TRKADQLHES VQRLEEKLSN SESEIQVLRQ QALAISPTSR TMATRSKTML LPRTPENGNY LNGGTKTTPD MTLAVREPES
1101: EEKPQKHLNE KQQENQDLLV KCISQNLGYN GDKPVAACVI YKCLLHWRSF EVERTSVFDR IIQTIATAIE VPDNNEVLAY WLSNSATLLL LLQRTLKATG
1201: AASLTPQRRR TTSASLFGRM SQGLRGSPQS AGLSFLNRQG LTKLDDLRQV EAKYPALLFK QQLTAFLEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGRAQANAV AQQALIAHWQ SIRKSLNSYL NLMKANNAPP FLVRKVFTQI FSFINVQLFN SLLLRRECCS FSNGEYVKAG LAELEQWCIE ATDEYAGSAW
1401: DELRHIRQAV GFLVIHQKPK KTLDEITREL CPVLSIQQLY RISTMYWDDK YGTHSVSSDV IANMRVMMTE DSNNAVSSSF LLDDDSSIPF TVEDISKSMQ
1501: QVDVNDIEPP QLIRENSGFG FLLTRKEGST S
0101: AVNPFQRLPH LYDTHMMEQY KGAGFGELSP HVFAIAEVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRS GVEGRTVEQQ VLESNPVLEA
0201: FGNAKTLRNN NSSRFGKFVE LQFDNCGRIS GAAVRTYLLE RSRVCQISDP ERNYHCFYLL CAAPPEEREK FKLGDPKLFH YLNQSKCYKL DGVDDTEEYL
0301: ATRRAMDIVG ISEEEQDAIF RVVAAILHLG NVNFAKGKEI DSSVLKDEKS RYHLDVCAEL LRCDAKKMED ALIKRVMVTP EEVITRTLDP DSATGSRDAL
0401: AKTIYSRLFD WLVDKINNSI GQDPNSKTII GVLDIYGFES FKINSFEQFC INFTNEKLQQ HFNQHVFKME QEDYTKEEIN WSYIEFVDNK DVLELIEKKP
0501: GGVIALLDEA CMFPKSTHET FAQKLYQTFK NYKRFTKPKL SRTSFAISHY AGEVTYQADL FLDKNKDYVV AEHQDLLIAS SDTFVAGLFP RLPEETSSKT
0601: KFSSIGSRFK LQLQSLMETL SSTEPHYIRC VKPNNVLKPA IFENVNVIQQ LRCGGVLEAI RISCAGYPTK RTFYEFLNRF GVLAPEVLEG NYDDKVACKM
0701: LLDKIGLKGY ELGKTKVFLR AGQMAELDAR RAEVLGNAAR RIQRQSRTFI ACKEFRALRG AAIVLQSNCR GKLACNLYEE MRRQAAAVKI QKIFRRHIAR
0801: ESYLRIRHST ITVQTALRGM VARNEFRFRK QMKAATIIQA RLRSHLTHSY YKQLQKAALS TQCGWRSRVA RKELRTLKMA ARDTGALREA KDKLEKRVEE
0901: LTWRLQLEKR QRTELEEAKT QEYAKQQEAL ETMRLQVEEA NAAVIREREA ARKAIEEAPP VIKETPVLVE DTEKINSLTS EVEALKASLQ AERQAAENLR
1001: KAFSEAEARN SELATELENA TRKADQLHES VQRLEEKLSN SESEIQVLRQ QALAISPTSR TMATRSKTML LPRTPENGNY LNGGTKTTPD MTLAVREPES
1101: EEKPQKHLNE KQQENQDLLV KCISQNLGYN GDKPVAACVI YKCLLHWRSF EVERTSVFDR IIQTIATAIE VPDNNEVLAY WLSNSATLLL LLQRTLKATG
1201: AASLTPQRRR TTSASLFGRM SQGLRGSPQS AGLSFLNRQG LTKLDDLRQV EAKYPALLFK QQLTAFLEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGRAQANAV AQQALIAHWQ SIRKSLNSYL NLMKANNAPP FLVRKVFTQI FSFINVQLFN SLLLRRECCS FSNGEYVKAG LAELEQWCIE ATDEYAGSAW
1401: DELRHIRQAV GFLVIHQKPK KTLDEITREL CPVLSIQQLY RISTMYWDDK YGTHSVSSDV IANMRVMMTE DSNNAVSSSF LLDDDSSIPF TVEDISKSMQ
1501: QVDVNDIEPP QLIRENSGFG FLLTRKEGST S
Arabidopsis Description
XI-KMyosin-17 [Source:UniProtKB/Swiss-Prot;Acc:F4K5J1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.