Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G363400.1 | Wheat | cytosol | 98.8 | 95.77 |
| TraesCS1B01G375000.1 | Wheat | cytosol | 95.73 | 93.09 |
| HORVU1Hr1G080240.9 | Barley | cytosol | 93.86 | 91.06 |
| Zm00001d038844_P001 | Maize | cytosol | 23.91 | 79.05 |
| Os05t0537300-01 | Rice | cytosol, mitochondrion, peroxisome | 13.59 | 78.83 |
| Os05t0537200-01 | Rice | cytosol, plasma membrane | 13.35 | 74.73 |
| OQU78360 | Sorghum | cytosol | 74.84 | 72.51 |
| Zm00001d038845_P002 | Maize | nucleus | 48.82 | 71.92 |
| TraesCS3A01G248800.7 | Wheat | cytosol | 70.81 | 61.69 |
| GSMUA_Achr8P26250_001 | Banana | cytosol | 43.98 | 59.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.54 | 59.71 |
| VIT_11s0016g01710.t01 | Wine grape | cytosol | 43.3 | 59.38 |
| TraesCS3A01G209500.1 | Wheat | cytosol | 43.35 | 59.25 |
| KRH19248 | Soybean | cytosol | 43.25 | 58.89 |
| KRH02661 | Soybean | cytosol | 43.06 | 58.63 |
| Solyc07g041150.2.1 | Tomato | nucleus | 42.87 | 58.4 |
| PGSC0003DMT400053991 | Potato | cytosol | 42.68 | 58.14 |
| GSMUA_Achr5P09720_001 | Banana | cytosol | 43.49 | 57.97 |
| CDY66597 | Canola | cytosol | 41.48 | 56.77 |
| AT5G20490.2 | Thale cress | cytosol | 41.67 | 56.7 |
| Bra020105.1-P | Field mustard | cytosol | 41.48 | 56.58 |
| VIT_09s0002g01910.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 42.29 | 56.55 |
| Bra006561.1-P | Field mustard | cytosol | 41.53 | 56.28 |
| CDX70927 | Canola | cytosol | 41.62 | 55.72 |
| CDY45087 | Canola | cytosol | 41.43 | 55.71 |
| AT1G17580.1 | Thale cress | cytosol | 40.37 | 55.33 |
| Bra030993.1-P | Field mustard | cytosol | 40.04 | 55.23 |
| CDY21744 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.04 | 55.01 |
| CDX81833 | Canola | cytosol | 38.65 | 54.95 |
| CDY51846 | Canola | cytosol | 41.57 | 54.78 |
| TraesCS6A01G390800.2 | Wheat | cytosol | 36.92 | 50.93 |
| TraesCS5A01G386500.1 | Wheat | cytosol | 37.78 | 50.58 |
| TraesCS1A01G166900.2 | Wheat | cytosol | 36.44 | 50.26 |
| TraesCS4A01G313500.1 | Wheat | cytosol | 34.47 | 48.29 |
| TraesCS6A01G336500.1 | Wheat | cytosol | 33.27 | 46.29 |
| TraesCS3A01G058100.1 | Wheat | cytosol | 11.57 | 30.43 |
| TraesCS1A01G162800.1 | Wheat | mitochondrion | 16.75 | 29.13 |
| TraesCS2A01G204700.1 | Wheat | cytosol, plastid | 17.19 | 28.35 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016459 | GO:GO:0016787 | InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 |
| InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS | InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase |
| PFAM:PD968187 | PFAM:PF00063 | PFAM:PF01843 | PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 |
| PFscan:PS51456 | PANTHER:PTHR13140 | PANTHER:PTHR13140:SF510 | SMART:SM00015 | SMART:SM00242 | SMART:SM01132 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1A01G358500 | EnsemblPlants:TraesCS1A01G358500.1 | TIGR:cd01384 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:+:540320446..540336598
Molecular Weight (calculated)
238197.0 Da
IEP (calculated)
6.916
GRAVY (calculated)
-0.605
Length
2083 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTRLSYLHEP GVLDNLAVRY AKNIIYTYTG NILIAINPFQ RLPHIAEPST MEKYRGANFG ELDPHVFALA DVSYRQMMNE GKSNSILVSG ESGAGKTETT
0101: KLLMRYLAFL GGRSKTGGRT VEQQVLESNP VLEAFGNAKT VRNNNSSRFG KFVEIQFDQS GKISGAAIRT YLLERSRVCQ INSPERNYHC FYFLCSAPSE
0201: DIKRYKLGDP SSFHYLNQSS CIKVDGMSDA EEYLATRSAM NTVGITEQEQ EATFRVVAAV LHLGNLNFVK GRDADSSVLK DEKAKFHLNA AAELLMCDRE
0301: KLENALIKRK INTPEGVITT TVDPNSATVS RDGLAKQIYC RLFDWLVNRL NASIGQDAHS ARLIGVLDIY GFESFKTNSF EQLCINFTNE KLQQHFNQNV
0401: FKMEQEEYNR EQIDWSYIEF VDNQDVLDLI ERKPGGIIAL LDEACMFPKC THESFSQKLY EKFKNNKRFS KPKLSRTAFT IQHYAGEVTY QSDHFLDKNR
0501: DYVVGEHEEL LNASKCSFVS GLFPSVPEEN TKSSKSSIAN RFKGQLHELM ETLSSTEPHY IRCVKPNNLL KPATFDNINV LQQLRCSGVL EAIRISCAGY
0601: PTRKLFRDFL QRFCIIAPEI LKERNDDKVI CQKILDKTGL QGYQIGRTKV FLRAGQMAEL DARRTEVRSK AARVIQSRYH TYVARQKFLA IRNTSVSFQS
0701: IVRVILACKR RVFLRNQDAA LKVQKSVRWY LAWKSYSKLR WSAVTLQAGL RAFGAYNEYV RRKQRKASIH IQARWRCHTD NSNYLKLKRS VLIYQCAWRR
0801: RVARRELRKL KMAARDTEAL KVEKEKLEEH VEELTSRLGL EMKLRADLEN NKAGEISKLQ AALREMEHRV EEATAVQESE SAKRAVEEAL AQEREKITIL
0901: TNEIEGMKVL LSREQEENTA TKNDLAIAQE RCEDLNGKIE VADENIKQLR DTVKRFEENV TELESSLMTE KQHNEATRGE LGEAHQRVEE LLRQVADADG
1001: KSAVLQSTVQ RLEESLTETE GTLLLERQES EAIKKSLTEA RGDNEELVHK TEVFEKDIAR FQNNIERLEE AARTFETSLL AEKQHSAAIM SQLAETKEEI
1101: EELQKKFTDA NRTNDTLQDS LKRLEETAAT RDALHVAEKQ EHGQTKEALS KSQERNSELL TKVDESEKSI NKLMENVKRL EKHATSRESL LLKTKQNQDG
1201: TTKALAEAEK RNEELMKSSE DSDKKISLLE DSVNRLEECA AEKDSLLATE RQENNATKEE LANAQKKTKE LVNELQNCQE IRKQLEENIK RLEQDATAKD
1301: ALLISEKQTH EATKKTLTET LGRNEELIKK IQDSDKHSLQ LQLTVERLQA NASAKEDLLL REREQSNTTM KVQEENQERN LQLLKRFEDV DKKIDLLQGT
1401: IQRLGDHTEK DTLLLSEKQE KDELKKALTE TEYKNEELTI KIGETNKKIE HLQNTIHMLE QDIVAKVASL EAEKQENDAI RKSLVEAQER NDELFMKIRD
1501: SEYKAHQLQD TVQKLQVDAI SRLSSFVLEK QESDAVKKAL TEARGRNEDL IRRNEDLLDR NDDLIKKIEE LQETIQKLEG KSSNLEAENQ TLRQHSIVST
1601: PSTAKSQASY SKISMIHRSQ ENGHILNGNV PYAEMRSSFG PAETRPYMGS APDLTIHRDY DTGEKMQRVL LSEGYQQPQD DQKLLLKYIT QHLGFSGNKP
1701: VAALLIYQYL LHSRSFEVTK TGVFDSILQA INSATEAQYD TRSLAYWLSN LSTLSVLLQR SFRTARTAAS VPYRRKMSYD RIYQASQASG LSYLSGQLLD
1801: EPGASHQIDA KYPALLFKQQ LVDLIEKVYG LISDKLKKEL NPLLELCIQD PRTSQAKASV TSAGLGQHNQ LTHWLGIVKI LNSYLYLLIA NHVPTILVHK
1901: LLTQIFSMVN VQLFNRLLLR RECCSFSNGE HIRAGLAQLK HWCNDVAQEL ADSAWEALRH IRQAADFLVI SRKQMRTWRE IRNDICPALS LQQLERIVGM
2001: YWDDMSGTNV LSAEFTSSMR ATMHEESNSL SSFSVLLDDD SSIPFSLDDI AKSMPNIEDT VESDLLPFIR ENQSLALILQ RRD
0101: KLLMRYLAFL GGRSKTGGRT VEQQVLESNP VLEAFGNAKT VRNNNSSRFG KFVEIQFDQS GKISGAAIRT YLLERSRVCQ INSPERNYHC FYFLCSAPSE
0201: DIKRYKLGDP SSFHYLNQSS CIKVDGMSDA EEYLATRSAM NTVGITEQEQ EATFRVVAAV LHLGNLNFVK GRDADSSVLK DEKAKFHLNA AAELLMCDRE
0301: KLENALIKRK INTPEGVITT TVDPNSATVS RDGLAKQIYC RLFDWLVNRL NASIGQDAHS ARLIGVLDIY GFESFKTNSF EQLCINFTNE KLQQHFNQNV
0401: FKMEQEEYNR EQIDWSYIEF VDNQDVLDLI ERKPGGIIAL LDEACMFPKC THESFSQKLY EKFKNNKRFS KPKLSRTAFT IQHYAGEVTY QSDHFLDKNR
0501: DYVVGEHEEL LNASKCSFVS GLFPSVPEEN TKSSKSSIAN RFKGQLHELM ETLSSTEPHY IRCVKPNNLL KPATFDNINV LQQLRCSGVL EAIRISCAGY
0601: PTRKLFRDFL QRFCIIAPEI LKERNDDKVI CQKILDKTGL QGYQIGRTKV FLRAGQMAEL DARRTEVRSK AARVIQSRYH TYVARQKFLA IRNTSVSFQS
0701: IVRVILACKR RVFLRNQDAA LKVQKSVRWY LAWKSYSKLR WSAVTLQAGL RAFGAYNEYV RRKQRKASIH IQARWRCHTD NSNYLKLKRS VLIYQCAWRR
0801: RVARRELRKL KMAARDTEAL KVEKEKLEEH VEELTSRLGL EMKLRADLEN NKAGEISKLQ AALREMEHRV EEATAVQESE SAKRAVEEAL AQEREKITIL
0901: TNEIEGMKVL LSREQEENTA TKNDLAIAQE RCEDLNGKIE VADENIKQLR DTVKRFEENV TELESSLMTE KQHNEATRGE LGEAHQRVEE LLRQVADADG
1001: KSAVLQSTVQ RLEESLTETE GTLLLERQES EAIKKSLTEA RGDNEELVHK TEVFEKDIAR FQNNIERLEE AARTFETSLL AEKQHSAAIM SQLAETKEEI
1101: EELQKKFTDA NRTNDTLQDS LKRLEETAAT RDALHVAEKQ EHGQTKEALS KSQERNSELL TKVDESEKSI NKLMENVKRL EKHATSRESL LLKTKQNQDG
1201: TTKALAEAEK RNEELMKSSE DSDKKISLLE DSVNRLEECA AEKDSLLATE RQENNATKEE LANAQKKTKE LVNELQNCQE IRKQLEENIK RLEQDATAKD
1301: ALLISEKQTH EATKKTLTET LGRNEELIKK IQDSDKHSLQ LQLTVERLQA NASAKEDLLL REREQSNTTM KVQEENQERN LQLLKRFEDV DKKIDLLQGT
1401: IQRLGDHTEK DTLLLSEKQE KDELKKALTE TEYKNEELTI KIGETNKKIE HLQNTIHMLE QDIVAKVASL EAEKQENDAI RKSLVEAQER NDELFMKIRD
1501: SEYKAHQLQD TVQKLQVDAI SRLSSFVLEK QESDAVKKAL TEARGRNEDL IRRNEDLLDR NDDLIKKIEE LQETIQKLEG KSSNLEAENQ TLRQHSIVST
1601: PSTAKSQASY SKISMIHRSQ ENGHILNGNV PYAEMRSSFG PAETRPYMGS APDLTIHRDY DTGEKMQRVL LSEGYQQPQD DQKLLLKYIT QHLGFSGNKP
1701: VAALLIYQYL LHSRSFEVTK TGVFDSILQA INSATEAQYD TRSLAYWLSN LSTLSVLLQR SFRTARTAAS VPYRRKMSYD RIYQASQASG LSYLSGQLLD
1801: EPGASHQIDA KYPALLFKQQ LVDLIEKVYG LISDKLKKEL NPLLELCIQD PRTSQAKASV TSAGLGQHNQ LTHWLGIVKI LNSYLYLLIA NHVPTILVHK
1901: LLTQIFSMVN VQLFNRLLLR RECCSFSNGE HIRAGLAQLK HWCNDVAQEL ADSAWEALRH IRQAADFLVI SRKQMRTWRE IRNDICPALS LQQLERIVGM
2001: YWDDMSGTNV LSAEFTSSMR ATMHEESNSL SSFSVLLDDD SSIPFSLDDI AKSMPNIEDT VESDLLPFIR ENQSLALILQ RRD
0001: MRNSGTPVNI IVGSHVWIED SDVAWIDGLV EKINGQDVEV QATNGKKITA KLSKIYPKDM EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE LNEIYTYTGN
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD
Arabidopsis Description
XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.