Factsheet for TraesCS4A01G313500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G04600.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G04600.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G566200.1	Wheat	cytosol	99.93	99.93
TraesCS5D01G558600.1	Wheat	cytosol	95.9	95.83
HORVU5Hr1G125430.15	Barley	cytosol	92.2	93.14
Os03t0860700-00	Rice	cytosol, plasma membrane	50.17	83.91
EER90459	Sorghum	cytosol	81.71	81.87
Zm00001d034927_P001	Maize	cytosol	82.04	81.66
TraesCS1A01G166900.2	Wheat	cytosol	74.98	73.84
VIT_00s0268g00030.t01	Wine grape	cytosol	19.44	64.94
Solyc09g064200.2.1	Tomato	plastid	65.03	63.87
PGSC0003DMT400056647	Potato	cytosol	64.96	63.8
TraesCS6A01G390800.2	Wheat	cytosol	64.36	63.38
Solyc06g008090.2.1	Tomato	cytosol	63.21	63.34
KRH19659	Soybean	cytosol	64.69	63.33
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.42	63.11
KRH67505	Soybean	cytosol	64.16	63.1
VIT_05s0051g00050.t01	Wine grape	cytosol	63.08	63.04
KRH32270	Soybean	cytosol	64.02	62.88
KRG95788	Soybean	cytosol	64.02	62.76
CDY32922	Canola	cytosol	63.01	62.18
Bra032526.1-P	Field mustard	cytosol	62.61	61.9
AT1G04160.1	Thale cress	cytosol	62.34	61.8
Bra011053.1-P	Field mustard	cytosol	62.54	61.75
Bra027512.1-P	Field mustard	cytosol	50.98	61.63
CDY64313	Canola	cytosol	63.01	61.6
CDY10075	Canola	endoplasmic reticulum	62.74	61.58
CDY32531	Canola	endoplasmic reticulum	62.54	61.55
AT4G28710.1	Thale cress	cytosol	62.41	61.21
CDX94736	Canola	cytosol	62.61	60.93
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	62.41	60.26
AT5G43900.3	Thale cress	cytosol	62.95	59.81
Bra036688.1-P	Field mustard	cytosol	57.03	58.69
CDY39766	Canola	cytosol	57.16	57.82
AT2G20290.1	Thale cress	endoplasmic reticulum	57.97	57.74
CDY03315	Canola	cytosol	57.09	57.72
TraesCS3A01G209500.1	Wheat	cytosol	58.84	57.41
Bra036460.1-P	Field mustard	cytosol	56.69	56.65
Solyc09g091080.2.1	Tomato	cytosol	61.73	56.46
KRG89126	Soybean	cytosol	59.92	56.36
VIT_16s0115g00220.t01	Wine grape	cytosol	10.09	56.18
Bra033704.1-P	Field mustard	cytosol, plastid	62.41	55.97
CDY31978	Canola	cytosol	56.56	54.68
PGSC0003DMT400038143	Potato	cytosol	30.67	53.52
CDY05734	Canola	cytosol	56.69	53.42
TraesCS5A01G386500.1	Wheat	cytosol	55.68	53.21
KRH40872	Soybean	cytosol	59.52	53.03
VIT_04s0079g00370.t01	Wine grape	cytosol	14.06	50.85
AT1G04600.1	Thale cress	cytosol	58.91	50.64
CDX79520	Canola	endoplasmic reticulum	51.31	50.46
GSMUA_Achr1P03340_001	Banana	cytosol	62.41	49.95
TraesCS6A01G336500.1	Wheat	cytosol	50.17	49.83
CDX84695	Canola	cytosol	57.7	49.48
CDY15512	Canola	cytosol	58.37	49.46
CDY19473	Canola	cytosol	58.17	49.4
AT2G33240.1	Thale cress	cytosol	58.64	49.27
CDX86626	Canola	cytosol	57.9	49.26
CDY65572	Canola	plastid	62.41	48.82
CDY35211	Canola	plastid	62.54	48.79
Bra030576.1-P	Field mustard	cytosol	55.48	48.79
CDY17154	Canola	cytosol	57.9	47.1
TraesCS1A01G358500.1	Wheat	cytosol	48.29	34.47
TraesCS3A01G248800.7	Wheat	cytosol	52.45	32.62
TraesCS1A01G162800.1	Wheat	mitochondrion	25.08	31.14
TraesCS3A01G058100.1	Wheat	cytosol	16.14	30.3
TraesCS2A01G204700.1	Wheat	cytosol, plastid	24.88	29.3

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787	GO:GO:0051015
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_S1_N
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF697	SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G313500
EnsemblPlants:TraesCS4A01G313500.1	TIGR:cd01384	TIGR:cd15475	SEG:seg	:	:

Description

No Description!

Coordinates

chr4A:+:604076529..604093392

Molecular Weight (calculated)

169425.0 Da

IEP (calculated)

8.222

GRAVY (calculated)

-0.427

Length

1487 amino acids

Sequence
(BLAST)

0001: MASKTKSRFV VGSHVWIEDA DEAWMDGQVE EVNGEDLVIN CTNGKKATVN LSTAFPKDTE SPRGGVEDMT RLAYLHEPGV LQNLKSRYAL NEIYTYTGNI
0101: LIAVNPFQRL PHLYNNHMMG IYKGAEFGEL SPHPFAITDR AYRLMINDRI SQAILVSGES GAGKTESTKS LMQYLAFMGG KAKAEGRSVQ EQILESNPVL
0201: EAFGNAKTVR NNNSSRFGKF VEIQFDQYGK ISGAAIRTYL LERSRVCQIS DPERNYHCFY MLCAAPEERA KYKLGEAKTF RYLNQSNCIE LNGFDDSKEY
0301: VETRRAMGIV GMSNEEQDAI FKVVAAILHL GNVEFGEGKE EDSSAPKDEK SQFHLKTAAE LFMCDAKGLE ESLCKRVMAT RGESITKNLD AKGAALSRDA
0401: LSRIVYSRLF DWLVNKINSS IGQDPDSKIL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYTKEEI DWSYIQFVDN QEILDLIEKK
0501: PGGIIALLDE TCMLRNSTHE TFAEKLYQKF KDSPHFSKPK FSRSDFTVHH YAGHVTYQTD LFLDKNIDYA VNEHQILLNA STCPFVSSLF PPVEESAKST
0601: KFTSIGSSFK QQLQSLLETL SATEPHYIRC IKPNNVLKPE IFENSNVLQQ LRCGGVLEAI RISCLGYPTR RTFYEFVNRF GILHPKALSK GNTEITSTKM
0701: ILEKANLVGY QIGKTKVFLR AGQMAELDAL RTEVLGLSAK KLQTKVRSFM SRKKYVEMRT CATQLQAVCR GTTARRLYEN LRRQAAALKI QTYRRMRHER
0801: IKYRDLCSAS TTIQCGLRGM AARGKLRFCR QTKAAVIIQS RCRCHLARSR YVRMTKAILV TQCAWRGKIA RRELRQLKMA AKETGALQAA KSKLEKEVEE
0901: LTWRLQVEKR IRSDLEEAKE AKIQENKKLQ SQLQELQQQF KETKELLKKE QETSKVASEK AEKVTLVPEI RVDETQVNEL TAEKEKLTAE NEKLKTLVSS
1001: LETKIEETEE RFQEQDQVRE ESMKKATEAE SQLNQLKNAF LSLREKLASA EAEIINLRQH AARPRPDPLL NMHKKSNLSV PADEQQSPPT PMEFGRRSLI
1101: ERHQESVEAL INCVNENIGF SDGKPVAAIT IYKCLLHWRT FEAEKTNVFD RIIQIFASGM QKQDSNPDLA YWLSNASSLL IILQKSLKPA GTVTTPLKRT
1201: TTQTSFLGRM VFRASSITVD MDLVRQVEGK YPAFLFKQQL TAFVEGLYGM IRDNVKREVS SVLSHVIQAP RTAKAGLLTD QHSYWKVIVG HFNDLLKILQ
1301: ENCVPTIFCR KIFTQLYAYI NAQLFNSLLV RRECCSFSNG EYVKQGLEEL ETWCTQAKPE YAGSAWDELK HITQAVGFLV IFKKFRVSYD EIMSDLCPVL
1401: SVHQLYRICT QYWDDKYNTE SVSEEVLNEM KTLVNEGAGS GAYLLDEETS MPLSLEEIGN SMDTKEFQNV VPPQELLDNA SFQFLKI

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.