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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G04600.1 CDX89318 AT4G26630.1 25387881
AT1G04600.1 CDX94304 AT4G26630.1 25387881
AT1G04600.1 CDX97358 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030576.1-P Field mustard cytosol 94.81 98.4
CDX86626 Canola cytosol 95.84 96.22
AT1G04600.1 Thale cress cytosol 84.56 85.78
CDY19473 Canola cytosol 75.67 75.84
CDX84695 Canola cytosol 74.3 75.2
CDX79520 Canola endoplasmic reticulum 63.99 74.27
CDX91798 Canola cytosol 20.97 73.02
CDY17154 Canola cytosol 75.21 72.21
VIT_00s0268g00030.t01 Wine grape cytosol 17.72 69.89
CDY72648 Canola cytosol 10.71 69.12
VIT_05s0051g00050.t01 Wine grape cytosol 57.66 68.01
Os03t0860700-00 Rice cytosol, plasma membrane 34.13 67.38
OQU85951 Sorghum cytosol 56.13 64.76
CDY32922 Canola cytosol 55.38 64.5
Zm00001d018481_P033 Maize cytosol 55.78 64.03
TraesCS6A01G390800.2 Wheat cytosol 55.04 63.97
TraesCS6D01G377100.1 Wheat cytosol 55.04 63.97
TraesCS6B01G431400.1 Wheat cytosol 55.04 63.97
CDY64313 Canola cytosol 55.21 63.71
HORVU6Hr1G091010.24 Barley cytosol 54.7 63.53
CDX94736 Canola cytosol 55.04 63.22
Os02t0816900-01 Rice cytosol, plasma membrane 45.3 62.65
Solyc09g091080.2.1 Tomato cytosol 57.95 62.55
CDY10075 Canola endoplasmic reticulum 53.9 62.44
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 54.76 62.4
CDY32531 Canola endoplasmic reticulum 53.68 62.34
CDX68955 Canola cytosol 18.46 62.31
VIT_16s0115g00220.t01 Wine grape cytosol 9.34 61.42
GSMUA_AchrUn_... Banana cytosol 53.73 61.23
KRG89126 Soybean cytosol 54.93 60.97
KXG34975 Sorghum cytosol 49.63 60.4
Zm00001d019495_P001 Maize cytosol 51.62 60.16
EER90459 Sorghum cytosol 50.54 59.77
Zm00001d034927_P001 Maize cytosol 50.77 59.64
GSMUA_Achr3P27420_001 Banana cytosol 56.64 59.56
TraesCS1D01G174000.2 Wheat cytosol 51.05 59.38
HORVU1Hr1G044020.1 Barley cytosol 51.0 59.31
TraesCS1A01G166900.2 Wheat cytosol 50.88 59.14
CDY39766 Canola cytosol 49.52 59.12
TraesCS1B01G183200.1 Wheat cytosol 50.77 59.01
CDY03315 Canola cytosol 49.4 58.94
TraesCS5B01G566200.1 Wheat cytosol 49.52 58.44
TraesCS4A01G313500.1 Wheat cytosol 49.46 58.37
KRH40872 Soybean cytosol 54.93 57.76
TraesCS5D01G558600.1 Wheat cytosol 48.89 57.66
HORVU5Hr1G125430.15 Barley cytosol 48.09 57.34
CDY31978 Canola cytosol 49.57 56.57
CDX81833 Canola cytosol 47.18 56.52
CDY66597 Canola cytosol 48.6 56.04
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 48.15 55.74
CDY31130 Canola cytosol, mitochondrion 48.89 55.71
CDY45087 Canola cytosol 48.77 55.26
CDX70927 Canola cytosol 48.95 55.21
CDY05734 Canola cytosol 49.57 55.13
CDY42350 Canola cytosol 47.12 55.02
CDX95235 Canola cytosol 48.09 54.95
CDY51846 Canola cytosol 48.95 54.33
CDX79446 Canola cytosol 47.07 53.05
VIT_04s0079g00370.t01 Wine grape cytosol 12.36 52.8
CDX84752 Canola cytosol 46.89 52.72
CDX88973 Canola cytosol 34.93 52.17
CDY00546 Canola cytosol 34.99 51.12
CDY65572 Canola plastid 54.36 50.18
CDY35211 Canola plastid 54.36 50.05
CDX67724 Canola cytosol 34.93 50.04
CDX98274 Canola nucleus 34.93 49.36
GSMUA_Achr1P03340_001 Banana cytosol 51.62 48.76
CDX93542 Canola cytosol 47.81 48.47
CDX95038 Canola cytosol 46.5 48.23
CDY46128 Canola cytosol 40.23 47.0
CDX72393 Canola cytosol 39.94 46.55
CDY71471 Canola cytosol 12.02 43.51
CDX75338 Canola cytosol 40.51 42.91
CDY69448 Canola extracellular, golgi, mitochondrion 6.84 36.36
CDX92461 Canola cytosol 9.29 35.21
CDY16536 Canola cytosol 8.89 34.74
CDY24591 Canola cytosol, plastid 21.94 33.22
CDY69853 Canola endoplasmic reticulum 9.06 32.92
CDY36068 Canola cytosol, mitochondrion 21.03 32.57
CDY29324 Canola cytosol 21.25 32.49
CDY42506 Canola cytosol, plastid 21.14 32.29
CDY22791 Canola cytosol, plastid 21.14 32.07
CDY65579 Canola endoplasmic reticulum 20.51 31.89
CDX82270 Canola cytosol 21.65 31.77
CDY53932 Canola cytosol, plastid 21.2 31.5
CDY52239 Canola cytosol 21.37 31.33
CDY28777 Canola cytosol 21.31 31.19
CDY18321 Canola cytosol 21.08 30.65
CDY14319 Canola cytosol, plastid 20.91 30.46
CDY25361 Canola cytosol 21.99 24.92
CDX72394 Canola nucleus 0.28 0.51
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078FRQ7UniProt:A0A078FRQ7EnsemblPlants:CDY15512ProteinID:CDY15512ProteinID:CDY15512.1
ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016459GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00089682001InterPro:IPR000048InterPro:IPR001609
InterPro:IPR002710InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11
InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF01843PFAM:PF02736
PRINTS:PR00193PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140
PANTHER:PTHR13140:SF256SMART:SM00015SMART:SM00242SMART:SM01132SUPFAM:SSF52540UniParc:UPI0004EE1C8E
SEG:seg:::::
Description
BnaA08g27960DBnaA08g27960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRQ7]
Coordinates
chrLK032055:+:299659..309308
Molecular Weight (calculated)
197738.0 Da
IEP (calculated)
5.323
GRAVY (calculated)
-0.561
Length
1755 amino acids
Sequence
(BLAST)
0001: MNNVRYRFSR GITFPEKIHA ASAKVSVGSH VWVEDPDEAW IDGEVEEANS DEITVNCSGK TVVAKVNAVY PKDPEFPELG VDDMTKLAYL HEPGLLLNLK
0101: CRYDSNEIYT YTGNILIAVN PFKRLPHLYG VDTMKQYKGT PFGELSPHPF AVADSAYRKM INEGVSQAIL VSGESGAGKT ESTKMLMRFL AYMGGRAESE
0201: GRSVEQQVLE SNPVLEAFGN AKTVRNNNSS RFGKFVEIQF DQRGRISGAA IRTYLLERSR VCQVSDPERN YHCFYMLCAA PEQETERYKL GKPSTFRYLN
0301: QSNCYALDGL DDSKEYLATR KAMDVVGIGS EDQDAIFRVV AAILHLGNIE FAKGEESEAA EPKDEKSLFH LKTAAELFMC DEKALEDSLC KRVMVTRDES
0401: ITKSLDPDSA ALGRDALAKI VYSKLFDWLV TKINNSIGQD PDSKHIIGVL DIYGFESFKT NSFEQFCINL TNEKLQQHFN QHVFKMEQEE YTKEEIDWSY
0501: IEFIDNQDIL DLIEKKPGGI IALLDEACMF PRSTHDTFAQ KLYQTFKDHK RFSKPKLAQT DFTICHYAGD VTYQTELFLD KNKDYVVGEH QALLSSSDCS
0601: FVSSLFPPLP EESSKTSKFS SIGSQFKHQL QSLLESLSTT EPHYIRCVKP NNLLKPEIFE NINILQQLRC GGVMEAIRIS CAGYPTRKPF NEFLTRFKIL
0701: APETTNRSND EVDACKKLLA KVDLKGFQIG KTKVFLRAGQ MAELDAHRAE VLGRSARIIQ RKVLSYQSRK KFLLLQAAST DIQALCRGQV ARVLFEKMRI
0801: EVACLRIQNQ ARTYICQKSY KSLCSSACSV QTGMRAKAAR SQTRRFLCRR HYVRMKKAAI ATQCGWRVRV ARRELRNLKM AAKEAGALQD AKSKLENQLE
0901: ELSSNLELEK QMRMKIEEAK AQETEALQSA LTDVKLKLKE TQETKSAEIS RLQSALQDMQ LEIEELSKGL EMSNDLSAEN EQLKELVSSL QNKNDEDVSK
1001: LSEEQIKQEV PVIDQTAIIK LEAENQQLKE LVSSLEEKID ALDRKHDETS SNITEQLKEN VSSDYEVVSN LAAENERLKA LVGSLEKKID GNNSSEGQEG
1101: KSMLKEESLT EDGSTDNERV NKLAAQNKDL NDLVSSLEKK IDETEKKYEE ASRLCEERLK QAVDAETKLI EAKTSMLRLQ ERVSDMETEE HIRRKQALVN
1201: STSRRMSPQV SFTGASENGH HESLAPIPAK KTGTESSRIE QQPHEFVDVL LKCVSQNVGF SHGKPVAAIT IYKCLIHWKI FEADKTSIFD KIVPVFGSAI
1301: ENQEDDNHLA YWLTNTSTLL FLLQRSLRHS PTGSSPTKPP QPTSFLGRMT QGFRSTSSPN LSTDVVHQVD AKYPALLFKQ QLTAYVETMY GIIRENFKRE
1401: VSSLLSSCIQ DLKKSSHESS VVKSPSKSSE ENLAAKSSED NNSPAKSSEE NSLKKSSEEN LTAKSYEENS LKKSSEDNDS PAKSSEENLT AKSSKDDNSP
1501: AKSSEENSLN KSSEENLPAK PSSPKQLSEE DSPAKEGQEA MLSEENSPAS SWQSIVVLLN HNLITWKKNY VPPFLVQKIF SQTFQHINVQ LFNSLLLEQE
1601: YCTFNMGKEV KAGLDELDSW CSQATEEFVG SSWDELKPTR QAVVLLVTEQ KSTITYDDLT TNLCPVLSTQ QLYRICTLSN NEDHTNNNVS PEVISNLKLL
1701: MTNEDEDSRS FLLDDDSSIP FETDEIANCM QEKDFANVKS VSELADNPNF LFLKD
Best Arabidopsis Sequence Match ( AT1G04600.1 )
(BLAST)
0001: MAASAKVTVG SHVWVEDPDD AWIDGEVEEV NSEEITVNCS GKTVVAKLNN VYPKDPEFPE LGVDDMTKLA YLHEPGVLLN LKCRYNANEI YTYTGNILIA
0101: VNPFKRLPHL YGSETMKQYK GTAFGELSPH PFAVADSAYR KMINEGVSQA ILVSGESGAG KTESTKMLMQ YLAYMGGRAE SEGRSVEQQV LESNPVLEAF
0201: GNAKTVRNNN SSRFGKFVEI QFDQRGRISG AAIRTYLLER SRVCQVSDPE RNYHCFYMLC AAPEQETERY KLGKPSTFRY LNQSNCYALD GLDDSKEYLA
0301: TRKAMDVVGI NSEEQDGIFR VVAAILHLGN IEFAKGEESE ASEPKDEKSR FHLKVAAELF MCDGKALEDS LCKRVMVTRD ESITKSLDPD SAALGRDALA
0401: KIVYSKLFDW LVTKINNSIG QDPNSKHIIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FNQHVFKMEQ EEYTKEEIDW SYIEFIDNQD VLDLIEKKPG
0501: GIIALLDEAC MFPRSTHDTF AQKLYQTFKN HKRFGKPKLA QTDFTICHYA GDVTYQTELF LDKNKDYVVG EHQALLSSSD CSFVSSLFPP LPEESSKTSK
0601: FSSIGSQFKQ QLQSLLESLS TTEPHYIRCV KPNNLLKPDI FENINILHQL RCGGVMEAIR ISCAGYPTRK PFNEFLTRFR ILAPETTKSS YDEVDACKKL
0701: LAKVDLKGFQ IGKTKVFLRA GQMAEMDAHR AEVLGHSARI IQRNVLTYQS RKKFLLLQAA STEIQALCRG QVARVWFETM RREAASLRIQ KQARTYICQN
0801: AYKTLCSSAC SIQTGMRAKA ARIELQLRKK RRATIIIQSQ IRRCLCHQRY VRTKKAAITT QCGWRVKVAR RELRNLKMAA KETGALQDAK TKLENQVEEL
0901: TSNLELEKQM RMEIEEAKSQ EIEALQSVLT DIKLQLRDTQ ETKSKEISDL QSVLTDIKLQ LRDTQETKSK EISDLQSALQ DMQLEIEELS KGLEMTNDLA
1001: AENEQLKESV SSLQNKIDES ERKYEEISKI SEERIKDEVP VIDQSAIIKL ETENQKLKAL VSSMEEKIDE LDRKHDETSP NITEKLKEDV SFDYEIVSNL
1101: EAENERLKAL VGSLEKKINE SGNNSTDEQE EGKYILKEES LTEDASIDNE RVKKLADENK DLNDLVSSLE KKIDETEKKY EEASRLCEER LKQALDAETG
1201: LIDLKTSMQR LEEKVSDMET AEQIRRQQAL VNSASRRMSP QVSFTGAPPL ENGHQEPLAP IPSRRFGTES FRRSRIERQP HEFVDVLLKC VSKNIGFSHG
1301: KPVAALTIYK CLMRWKIFEA EKTSIFDRIV PVFGSAIENQ EDDNHLAYWL TNTSTLLFLL QRSLRQQSST GSSPTKPPQP TSFFGRMTQG FRSTSSPNLS
1401: TDVVQQVDAR YPALLFKQQL TAYVETMYGI IRENVKREVS SLLSSCIQSL KESSCDSSVV NSPSKSSEEN LPAKSSEENS PKKSSEENSP KESSGDKSPQ
1501: KLSDDNSPSK EGQAVKSSEE NSPASSWQSI IEFLNYILIT WKKNYVPLFL VQKMFSQTFQ YINVQLFNSL LLEREYCTVN MGIKVKAGLD ELESWCSQAT
1601: EEFVGSSWDE LKHTRQAVVL LVTEPKSTIT YDDLTINLCS VLSTEQLYRI CTLCKDKDDG DHNVSPEVIS NLKLLLTNED ENSRSFLLDD DSSIPFDTDE
1701: ISSCMQEKDF ANVKSASELA DNPNFLFLKE
Arabidopsis Description
XI-AMyosin-7 [Source:UniProtKB/Swiss-Prot;Acc:F4I5Q6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.