CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030739.1-P	Field mustard	cytosol	94.22	93.43
CDX91798	Canola	cytosol	30.06	91.87
AT1G08730.1	Thale cress	endoplasmic reticulum	91.36	91.48
CDY42350	Canola	cytosol	86.56	88.69
CDX95235	Canola	cytosol	87.92	88.15
CDY72648	Canola	cytosol	15.32	86.76
VIT_14s0081g00160.t01	Wine grape	cytosol	82.99	83.91
KRG92711	Soybean	cytosol	82.14	82.52
KRH34117	Soybean	cytosol	81.43	81.85
CDX93542	Canola	cytosol	91.69	81.57
Solyc11g006220.1.1	Tomato	cytosol, extracellular	80.26	81.0
CDX95038	Canola	cytosol	88.51	80.56
KRH68770	Soybean	cytosol	78.7	80.0
Os06t0488200-01	Rice	cytosol, plasma membrane	78.64	79.2
Zm00001d044819_P002	Maize	cytosol	78.05	78.61
OQU76115	Sorghum	cytosol	75.58	78.6
GSMUA_Achr7P26040_001	Banana	cytosol	27.08	78.38
TraesCS7D01G190300.1	Wheat	cytosol	77.4	77.91
HORVU7Hr1G038500.56	Barley	cytosol	77.73	76.63
TraesCS7B01G094100.1	Wheat	cytosol	76.17	76.57
GSMUA_Achr4P14090_001	Banana	cytosol	76.62	75.93
CDY66597	Canola	cytosol	70.26	71.09
CDX70927	Canola	cytosol	71.69	70.95
CDY45087	Canola	cytosol	70.45	70.05
CDY51846	Canola	cytosol	71.56	69.7
CDY65579	Canola	endoplasmic reticulum	50.0	68.2
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.06	66.09
CDX81833	Canola	cytosol	62.86	66.08
GSMUA_Achr7P26030_001	Banana	cytosol	49.61	63.99
CDX68955	Canola	cytosol	21.56	63.85
CDY32922	Canola	cytosol	60.71	62.04
CDY64313	Canola	cytosol	60.84	61.6
CDX94736	Canola	cytosol	60.78	61.26
CDY10075	Canola	endoplasmic reticulum	60.19	61.19
CDY32531	Canola	endoplasmic reticulum	60.0	61.15
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	79.55	61.1
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.65	60.65
CDX84752	Canola	cytosol	60.26	59.45
CDX79446	Canola	cytosol	59.94	59.28
CDY39766	Canola	cytosol	55.52	58.16
CDY03315	Canola	cytosol	55.32	57.92
CDX88973	Canola	cytosol	44.03	57.7
CDY00546	Canola	cytosol	44.09	56.54
CDX67724	Canola	cytosol	44.09	55.43
CDX98274	Canola	nucleus	44.09	54.67
CDY31978	Canola	cytosol	53.96	54.03
CDY69448	Canola	extracellular, golgi, mitochondrion	11.56	53.94
CDY46128	Canola	cytosol	51.75	53.06
CDX72393	Canola	cytosol	51.82	52.99
CDY05734	Canola	cytosol	53.7	52.41
CDX79520	Canola	endoplasmic reticulum	49.74	50.66
CDX75338	Canola	cytosol	53.31	49.55
CDX84695	Canola	cytosol	55.39	49.19
CDX86626	Canola	cytosol	55.58	48.97
CDY15512	Canola	cytosol	55.71	48.89
CDY65572	Canola	plastid	60.19	48.76
CDY35211	Canola	plastid	60.13	48.58
CDY19473	Canola	cytosol	54.81	48.2
CDY16536	Canola	cytosol	13.77	47.22
CDX92461	Canola	cytosol	14.03	46.65
CDY17154	Canola	cytosol	54.61	46.01
CDY71471	Canola	cytosol	14.48	45.98
CDY69853	Canola	endoplasmic reticulum	12.01	38.3
CDY42506	Canola	cytosol, plastid	24.48	32.81
CDY24591	Canola	cytosol, plastid	24.68	32.79
CDY29324	Canola	cytosol	24.42	32.75
CDY22791	Canola	cytosol, plastid	24.42	32.5
CDY36068	Canola	cytosol, mitochondrion	23.7	32.22
CDY52239	Canola	cytosol	24.68	31.75
CDY28777	Canola	cytosol	24.68	31.69
CDY53932	Canola	cytosol, plastid	24.22	31.58
CDX82270	Canola	cytosol	24.48	31.52
CDY18321	Canola	cytosol	24.29	30.99
CDY14319	Canola	cytosol, plastid	24.09	30.79
CDY25361	Canola	cytosol	24.74	24.6
CDX72394	Canola	nucleus	0.39	0.61

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078GXF0	UniProt:A0A078GXF0	EnsemblPlants:CDY31130	ProteinID:CDY31130	ProteinID:CDY31130.1
ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00047218001
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736	PRINTS:PR00193	PFscan:PS50096
PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM00015
SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI0004EEB0E2	SEG:seg	:

Description

BnaA08g26800DBnaA08g26800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXF0]

Coordinates

chrLK032267:-:348627..357854

Molecular Weight (calculated)

174677.0 Da

IEP (calculated)

9.257

GRAVY (calculated)

-0.410

Length

1540 amino acids

Sequence
(BLAST)

0001: MLLFPHNGRL SLRAQSFSIN SNIRILNYCD VFGKLQGTPV NIIVGSHVWV EDSDVAWIDG EVEKLTGQEI TAKLSKIYPK DVEAPAGGVD DMTKLSYLHE
0101: PGVLQNLKIR YELNEIYTYT GNILIAINPF QRLPHIYDAH MMQQYKGAPF GELNPHVFAV ADVAYRAMIN EGKSNSILVS GESGAGKTET TKMLMRYLAY
0201: LGGRAVTEGR TVEQQVLESN PVLEAFGNAK TVRNNNSSRF GKFVEIQFDK QGRISGAAIR TYLLERSRVC QISDPERNYH CFYLLCAAPQ EEIEKYKLGH
0301: PKTFHYLNQS KCYELVGISD AHDYLATRRA MDIVGISEKE QEAIFRGKEV DSSVPKDDKA KFHLKTAAEL LMCDLKALED ALCKRVMVTP EEVIKRSLDP
0401: ESAVTSRDGL AKTVYSRLFD WLVNKINNSI GQDANSKCLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNK
0501: DVLDLIEKKP GGIIALLDEA CMFPKSTHET FANKLYQTFK AHKRFIKPKL SRTDFTVAHY AGEVLYQSDL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP
0601: PLPEETSKSS KFSSIGSRFK LQLQQLMETL NSTEPHYIRC VKPNNLLKPA VFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFVNRF GLLCPSALEG
0701: SYDEKVVCKK ILDSMGLKGY QIGKTKIFLR AGQMAELDAR RTEVLSGAAK KIQRRTRTHQ AQKRFTVLRK ATISLQALCR GRLSCKVYEN LRREAAAVKI
0801: QKNGRRYYSR KSYKKLHVSA LALQTGLRAM AARKEFRFRK QTKAATIVQA QWRCHRATTY YKKLKNGVII SQTRWRGRLA RRELRKLKMA SRETGALKEA
0901: KDMLEKKVEE LTYRVQLEKR LRADLEEAKT QEQAKLQSSL EEMRKKVEEA NALLVKEREA AKKAAEEAPP VIQETQVLVE DTKKIELMTE ELESVKATLE
1001: NEKQRADEAV KKFEEAQESL EDRIKKLEES EKKGQQLQES LTRMEEKCTN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSSLDLHS
1101: HSINHRDSSE VDDKPQKSLN EKQQENHELL IRCIVQPLGF KGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNASTLL
1201: LLLQRTLKAS GAAGMAPQRR RSSSATLFGR MTQSFRGAPP GVNLAMINGA AGGGADTLRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC
1301: IQAPRTSRAS LVKGASRSVA NTAGQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW
1401: CFKATDEYAG SSWDELKHIR QAIGFLVIHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS
1501: IPFSVDDLSK SMERFDIADI EPPPLIRENS GFSFLLPVAE

Best Arabidopsis Sequence Match ( AT1G08730.2 )
(BLAST)

0001: MGTPVNIIVG SHVWFEDPEV AWIDGEVEKI NGQEVVIQAT TGKKVTAKLS KIYPKDVEAP AGGVDDMTKL SYLHEPGVLQ NLKIRYELNE IYTYTGNILI
0101: AINPFQRLPH IYDAHMMQQY KGAPLGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEEIEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYL
0301: ATRRAMDIVG ISEKEQEAIF RVVAAILHIG NIDFTKGKEV DSSVPKDEKS KFHLKTAAEL LMCDLKALED ALCKRVMITP EEVIKRSLDP QSAVTSRDGL
0401: AKTVYSRLFD WLVDKINKSI GQDANSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NCTEPHYIRC VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG NFDEKVACQK
0701: ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR
0801: KSYKKLHVAS LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA KRELRKLKMA ARETGALKEA KDMLEKKVEE
0901: LTYRVQLEKR SRGDLEEAKT QEILKLKSSF EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE NEKQRADDAV
1001: RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE
1101: VEDKPQKSLN EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MSQSFRGAPP GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC IQAPRTSRAS
1301: LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG
1401: SSWDELKHIR QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS IPFSVDDLSK
1501: SMEKFEIADI EPPPLIRENS GFSFLLPVSE

Arabidopsis Description

XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.