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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003324.1-P Field mustard cytosol 99.59 99.03
CDX98274 Canola nucleus 98.61 97.26
CDX88973 Canola cytosol 83.35 86.89
CDY00546 Canola cytosol 83.27 84.93
AT3G58160.1 Thale cress cytosol 83.18 82.05
CDX91798 Canola cytosol 29.47 71.63
GSMUA_Achr7P26040_001 Banana cytosol 30.69 70.68
CDY72648 Canola cytosol 15.43 69.49
KRH32145 Soybean cytosol 52.33 63.15
VIT_07s0005g02970.t01 Wine grape cytosol 58.12 62.29
KRH19523 Soybean cytosol 54.45 61.93
CDX68955 Canola cytosol 25.8 60.77
Solyc06g083960.1.1 Tomato cytosol 55.59 59.79
OQU76115 Sorghum cytosol 57.31 47.4
Os06t0488200-01 Rice cytosol, plasma membrane 58.37 46.76
Zm00001d044819_P002 Maize cytosol 58.12 46.57
TraesCS7D01G190300.1 Wheat cytosol 56.57 45.29
TraesCS7B01G094100.1 Wheat cytosol 56.49 45.17
CDX95235 Canola cytosol 56.49 45.05
HORVU7Hr1G038500.56 Barley cytosol 57.14 44.81
CDY42350 Canola cytosol 54.86 44.71
CDX81833 Canola cytosol 53.22 44.51
GSMUA_Achr4P14090_001 Banana cytosol 56.41 44.47
CDY66597 Canola cytosol 54.86 44.15
CDY31130 Canola cytosol, mitochondrion 55.43 44.09
CDY45087 Canola cytosol 55.02 43.51
CDX70927 Canola cytosol 55.18 43.44
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 53.22 43.01
CDY51846 Canola cytosol 55.1 42.69
CDY32922 Canola cytosol 51.76 42.07
CDY64313 Canola cytosol 51.76 41.68
CDY32531 Canola endoplasmic reticulum 51.1 41.43
CDY10075 Canola endoplasmic reticulum 51.1 41.32
CDX94736 Canola cytosol 51.35 41.16
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 51.51 40.97
CDX79446 Canola cytosol 50.94 40.08
CDX84752 Canola cytosol 51.02 40.04
CDY39766 Canola cytosol 47.35 39.46
CDY03315 Canola cytosol 47.27 39.36
CDX93542 Canola cytosol 55.02 38.94
CDX79520 Canola endoplasmic reticulum 48.0 38.89
CDX95038 Canola cytosol 53.47 38.71
CDY31978 Canola cytosol 47.51 37.84
CDY05734 Canola cytosol 47.76 37.07
GSMUA_Achr4P07150_001 Banana cytosol, mitochondrion, nucleus, plastid 59.18 36.16
CDX84695 Canola cytosol 50.2 35.47
CDY15512 Canola cytosol 50.04 34.93
CDX86626 Canola cytosol 49.8 34.9
CDY19473 Canola cytosol 49.22 34.44
CDX72393 Canola cytosol 41.55 33.8
CDY46128 Canola cytosol 41.31 33.69
CDY65572 Canola plastid 51.27 33.04
CDY17154 Canola cytosol 49.06 32.88
CDY35211 Canola plastid 51.1 32.84
CDX75338 Canola cytosol 42.37 31.32
CDY42506 Canola cytosol, plastid 27.92 29.77
CDY22791 Canola cytosol, plastid 27.92 29.56
CDY29324 Canola cytosol 27.67 29.53
CDY36068 Canola cytosol, mitochondrion 27.1 29.3
CDY24591 Canola cytosol, plastid 27.59 29.16
CDX82270 Canola cytosol 27.84 28.51
CDY52239 Canola cytosol 27.76 28.4
CDY53932 Canola cytosol, plastid 27.35 28.37
CDY18321 Canola cytosol 27.76 28.17
CDY28777 Canola cytosol 27.43 28.02
CDY14319 Canola cytosol, plastid 27.51 27.97
GSMUA_Achr7P26030_001 Banana cytosol 27.1 27.81
CDY69853 Canola endoplasmic reticulum 9.14 23.19
CDY25361 Canola cytosol 27.67 21.89
PGSC0003DMT400028274 Potato cytosol 10.94 17.99
CDY65579 Canola endoplasmic reticulum 15.67 17.01
CDY71471 Canola cytosol 4.08 10.31
CDX92461 Canola cytosol 2.04 5.4
CDY16536 Canola cytosol 1.8 4.9
CDY69448 Canola extracellular, golgi, mitochondrion 1.06 3.94
CDX72394 Canola nucleus 0.57 0.71
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078BVI1EnsemblPlants:CDX67724ProteinID:CDX67724ProteinID:CDX67724.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016459GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00098911001InterPro:IPR000048InterPro:IPR001609InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF00612PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF652SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EEAE31
SEG:seg:::::
Description
BnaA07g17640D
Coordinates
chrLK031787:+:1987513..1995022
Molecular Weight (calculated)
139308.0 Da
IEP (calculated)
6.261
GRAVY (calculated)
-0.533
Length
1225 amino acids
Sequence
(BLAST)
0001: MLMILQVKVS SAKNGRERER EEEENGVHKN GEIEGEFLRT IDHSSNSSVD RNCSRGSYIY RYSSHGLLAS LRYNARMGSY GMAENIMVDS HVWVEDPDVA
0101: WIHGVVVDIK ADQATVKTND DREVIANLSK LYIKDDEAPS EGVEDMTRLS YLHEPAVLEN LATRYGLNEI YTYTGNILIA VNPFQGLPHL YDAEVMEKYK
0201: EASFKELSPH VFAIGGIAYR EMINEGRNKC ILVSGESGSG KTETTKVLMR YLAYFGGHTA GEGRTVENQV LESNPVLEAF GNAKTVKNNN SSRFGKFVEI
0301: QFDDIGRISG AAIRTYLLER SRVCQVSDPE RNYHCFYLLC AAPPEDVERF KLGDPKSFRY LNQSSCFELD GVNDAEEYLA TRKAMDVVGI SEQEQDAIFR
0401: VVAAILHLGN IEFCKGEDAD SSSLKDEQSK FHLQMTSELL MCDSHSLEDA LCKRIMVTPE EVIKRSLDPL GAAVSRDGLA KTIYSRLFDW LVNKINISIG
0501: QDSNSRRLIG VLDIYGFESF KANSFEQFCI NYTNEKLQQH FNQHVFKMEQ GEYEKEEIDW SYVEFVDNQE VVDLIEKKPG GIIALLDEAC MLPKSTPETF
0601: SEKLYQTFRD HKRFIKPKLT RSDFTLVHYA GDVRYQSDQF LDKNKDYVVA EHQDMLNASK CSFVSGLFPP LPKESSKSKF SSIGARFKLQ LQQLMETLNH
0701: TEPHYIRCVK PNNLLQPTVF DNANVLHQLR SGGVLEAIRV KCAGYPTNRT FIEFLNRFII LAPEILKGEY EADVACKWIL EKKGLTGYQI GKSKVFLRAG
0801: QMAELDAHRT RVLGEAARMI QGQVRTRLTR ERYVLMRRAS VQIQANWRRN IAGNICKHMR REEAAIKIQK NLRRQVAKKE YGQTKSSAVT LQSGVRTMVA
0901: RHEFRFKLKS KAATVIQAYW RGYSAISDYK KLKKASLVYQ NRLRGRIARK QLGQSNQADK KKETVHEREV ELSNQVEEAV DMSCVLHSEP SDDAETGDEH
1001: YPKIFIRADS GLDKSFVMPS EQSGDEEIEH ERQTKHSILT EDGTENSIVL ESEKPYNNFS VVSHITNPIR DTEVESLTAE VEMLKALLVV EKQRADISER
1101: KCAEARELGE RRRKRLEETE RRVYQLQDSL NRLLYSMSDQ FSQLKSILRS PSMSSPMATV PVVRDDLADS SENSEASSSD SDFTFPAPST SSADNSNLQV
1201: IVQDLSTTEA KGTENDKERG FEDYF
Best Arabidopsis Sequence Match ( AT3G58160.1 )
(BLAST)
0001: MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT
0301: RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS
0601: SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE
0701: KKGLTGYQIG KSKVFLRAGQ MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR EEAAIKIQKN LRRQIAKKDY
0801: GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD
0901: MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD
1001: DEEIGHKRKT KHSIQAEDGI EKSFVVHSDQ SDDEEIGHER KTKHAIQVED GIQKSFVTCS EKPYNTFSVV SQITSPIRDT EIESLTAEVE MLKALLQVEK
1101: QRADISERKC AEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS MSASTMASAP VVRDDLADSS ENSEASSSDS DFTFPAPSPS
1201: SDNFSTFNPN QLQVIVQDLS TTEAKGTESY DSDKEGGFED YF
Arabidopsis Description
XI-JMyosin-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.