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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX67724 Canola cytosol 97.26 98.61
CDX88973 Canola cytosol 82.37 87.06
CDY00546 Canola cytosol 82.29 85.1
AT3G58160.1 Thale cress cytosol 82.37 82.37
CDX91798 Canola cytosol 28.99 71.43
GSMUA_Achr7P26040_001 Banana cytosol 30.35 70.86
CDY72648 Canola cytosol 15.22 69.49
KRH32145 Soybean cytosol 51.69 63.25
VIT_07s0005g02970.t01 Wine grape cytosol 57.49 62.47
KRH19523 Soybean cytosol 53.86 62.12
CDX68955 Canola cytosol 25.36 60.58
Solyc06g083960.1.1 Tomato cytosol 54.99 59.96
OQU76115 Sorghum cytosol 56.52 47.4
Os06t0488200-01 Rice cytosol, plasma membrane 57.73 46.89
Zm00001d044819_P002 Maize cytosol 57.33 46.57
TraesCS7D01G190300.1 Wheat cytosol 55.72 45.23
TraesCS7B01G094100.1 Wheat cytosol 55.64 45.1
CDX95235 Canola cytosol 55.72 45.05
HORVU7Hr1G038500.56 Barley cytosol 56.36 44.81
CDY42350 Canola cytosol 54.19 44.78
CDX81833 Canola cytosol 52.58 44.57
GSMUA_Achr4P14090_001 Banana cytosol 55.72 44.53
CDY66597 Canola cytosol 54.11 44.15
CDY31130 Canola cytosol, mitochondrion 54.67 44.09
CDY45087 Canola cytosol 54.27 43.51
CDX70927 Canola cytosol 54.51 43.51
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.58 43.07
CDY51846 Canola cytosol 54.43 42.76
CDY32922 Canola cytosol 51.05 42.07
CDY64313 Canola cytosol 51.05 41.68
CDY32531 Canola endoplasmic reticulum 50.32 41.36
CDY10075 Canola endoplasmic reticulum 50.32 41.25
CDX94736 Canola cytosol 50.64 41.16
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 50.81 40.97
CDX79446 Canola cytosol 50.32 40.14
CDX84752 Canola cytosol 50.4 40.1
CDY39766 Canola cytosol 46.78 39.52
CDY03315 Canola cytosol 46.7 39.43
CDX93542 Canola cytosol 54.35 38.99
CDX79520 Canola endoplasmic reticulum 47.18 38.76
CDX95038 Canola cytosol 52.74 38.71
CDY31978 Canola cytosol 47.02 37.97
CDY05734 Canola cytosol 47.1 37.07
GSMUA_Achr4P07150_001 Banana cytosol, mitochondrion, nucleus, plastid 58.45 36.21
CDX84695 Canola cytosol 49.44 35.41
CDX86626 Canola cytosol 49.28 35.01
CDY15512 Canola cytosol 49.36 34.93
CDY19473 Canola cytosol 48.55 34.44
CDX72393 Canola cytosol 40.98 33.8
CDY46128 Canola cytosol 40.74 33.69
CDY65572 Canola plastid 50.64 33.09
CDY35211 Canola plastid 50.48 32.9
CDY17154 Canola cytosol 48.31 32.82
CDX75338 Canola cytosol 41.79 31.32
CDY42506 Canola cytosol, plastid 27.62 29.85
CDY22791 Canola cytosol, plastid 27.62 29.65
CDY29324 Canola cytosol 27.38 29.62
CDY36068 Canola cytosol, mitochondrion 26.81 29.39
CDY24591 Canola cytosol, plastid 27.29 29.25
CDX82270 Canola cytosol 27.54 28.6
CDY52239 Canola cytosol 27.54 28.57
CDY53932 Canola cytosol, plastid 27.13 28.54
CDY18321 Canola cytosol 27.54 28.33
CDY28777 Canola cytosol 27.21 28.19
CDY14319 Canola cytosol, plastid 27.29 28.13
GSMUA_Achr7P26030_001 Banana cytosol 26.73 27.81
CDY69853 Canola endoplasmic reticulum 9.1 23.4
CDY25361 Canola cytosol 27.38 21.95
PGSC0003DMT400028274 Potato cytosol 10.79 17.99
CDY65579 Canola endoplasmic reticulum 15.54 17.09
CDY71471 Canola cytosol 4.11 10.52
CDX92461 Canola cytosol 2.01 5.4
CDY16536 Canola cytosol 1.77 4.9
CDY69448 Canola extracellular, golgi, mitochondrion 1.05 3.94
CDX72394 Canola nucleus 0.64 0.81
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078EBV5EnsemblPlants:CDX98274ProteinID:CDX98274ProteinID:CDX98274.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016459GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00105801001InterPro:IPR000048InterPro:IPR001609InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF00612PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF652SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EF287C
SEG:seg:::::
Description
BnaC06g16350D
Coordinates
chrLK031904:+:260212..267509
Molecular Weight (calculated)
141467.0 Da
IEP (calculated)
6.336
GRAVY (calculated)
-0.537
Length
1242 amino acids
Sequence
(BLAST)
0001: MLMFLQVKVS SAKLGGKEKR EERREKREER DEDNGVHRNG EIEGDFLRTI DHSSNSSVDR NCSRGSYIYR YSSHGLLASL RYNARMVFDP LLLIGSYGMA
0101: ENIMVDSHVW VEDPEVAWIH GVVVDIKAHQ ATVKTNDDRE VIANLSKLYI KDDEAPSEGV EDMTRLSYLH EPAVLENLAT RYGLNEIYTY TGNILIAVNP
0201: FQGLPHLYDA EVMEKYKEAS FKELSPHVFA IGGIAYREMI NEGRNKCILV SGESGSGKTE TTKVLMRYLA YFGGHTAGEG RTVENQVLES NPVLEAFGNA
0301: KTVKNNNSSR FGKFVEIQFD DIGRISGAAI RTYLLERSRV CQVSDPERNY HCFYLLCAAP PEDVERFKLG DPKSFRYLNQ SSCFELDGVN DAEEYLATRK
0401: AMDVVGISEQ EQDAIFRVVA AILHLGNIEF CKGEDADSSS LKDEQSKFHL QMTSELLMCD SHSLEDALCK RIMVTPEEVI KRSLDPLGAA VSRDGLAKTI
0501: YSRLFDWLVN KINISIGQDS NSRRLIGVLD IYGFESFKAN SFEQFCINYT NEKLQQHFNQ HVFKMEQGEY EKEEIDWSYV EFVDNQEVVD LIEKKPGGII
0601: ALLDEACMLP KSTPETFSEK LYQTFRDHKR FIKPKLTRSD FTLVHYAGDV RYQSDQFLDK NKDYVVAEHQ DMLNASKCSF VSGLFPPLPK ESSKSKFSSI
0701: GARFKLQLQQ LMETLNYTEP HYIRCVKPNN LLQPTVFDNA NVLHQLRSGG VLEAIRVKCA GYPTNRTFIE FLNRFIILAP EILKGEYEAD VACKWILEKK
0801: GLTGYQIGKS KVFLRAGQMA ELDAHRTRVL GEAARMIQGQ VRTRLTRERY VLMRRASVQI QANWRRNIAG NICKHMRREE AAIKIQKNLR RQVAKKEYGQ
0901: TKSSAVTLQS GVRTMVARHE FRFKLKSKAA TVIQAYWRGY SAISDYKKLK KASLVYQNRL RGRIARKQLG QSNQADKKKE TEHEREVELS NQVEEAVDMS
1001: CVLHSEPSDD AETGDEQYPK IFIRADSGLD KSFVMPSEQS GDEEIEHERQ TKHSILTEDG TEKSIVLESE KPYNNFSVVS HITNPIRDTE VESLTAEVEM
1101: LKALLVVEKQ RADISERKCA EARELGERRR KRLEETERRV YQLQDSLNRL LYSMSDQFSQ LKSILRSPSM SSTMASVPVV RDDLADSSEN SEASSSDSDF
1201: TFPAPSTSSA DNSNLQVIVQ DLSTTEAKGT ENDKERGFED YF
Best Arabidopsis Sequence Match ( AT3G58160.1 )
(BLAST)
0001: MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT
0301: RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS
0601: SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE
0701: KKGLTGYQIG KSKVFLRAGQ MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR EEAAIKIQKN LRRQIAKKDY
0801: GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD
0901: MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD
1001: DEEIGHKRKT KHSIQAEDGI EKSFVVHSDQ SDDEEIGHER KTKHAIQVED GIQKSFVTCS EKPYNTFSVV SQITSPIRDT EIESLTAEVE MLKALLQVEK
1101: QRADISERKC AEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS MSASTMASAP VVRDDLADSS ENSEASSSDS DFTFPAPSPS
1201: SDNFSTFNPN QLQVIVQDLS TTEAKGTESY DSDKEGGFED YF
Arabidopsis Description
XI-JMyosin-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.