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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018844.1-P Field mustard cytosol 98.62 99.05
CDY42506 Canola cytosol, plastid 97.67 98.35
CDY29324 Canola cytosol 89.2 89.9
AT1G50360.1 Thale cress cytosol 89.54 89.85
CDY53932 Canola cytosol, plastid 88.94 87.13
CDY24591 Canola cytosol, plastid 85.13 84.99
CDY36068 Canola cytosol, mitochondrion 80.12 81.82
CDX82270 Canola cytosol 83.49 80.77
VIT_10s0071g00210.t01 Wine grape plastid 76.32 74.83
KRG90612 Soybean cytosol 75.37 74.53
KRH36145 Soybean cytosol 75.54 74.32
Solyc02g020910.2.1 Tomato nucleus 73.9 73.9
KRG89103 Soybean cytosol 74.68 73.47
KRH40907 Soybean cytosol 73.9 73.08
Os10t0488800-01 Rice cytosol 59.46 72.42
HORVU1Hr1G043440.4 Barley cytosol 65.77 67.4
Zm00001d032637_P004 Maize mitochondrion 68.11 66.16
Zm00001d013967_P004 Maize mitochondrion 68.11 66.0
EER94044 Sorghum mitochondrion 68.02 65.8
TraesCS1D01G159600.1 Wheat mitochondrion 66.81 64.9
TraesCS1B01G179500.2 Wheat mitochondrion 66.9 64.82
GSMUA_Achr1P01870_001 Banana cytosol 70.87 64.67
TraesCS1A01G162800.1 Wheat mitochondrion 66.72 64.44
CDY25361 Canola cytosol 84.18 62.88
GSMUA_Achr2P10680_001 Banana cytosol 65.51 60.06
CDY52239 Canola cytosol 54.19 52.38
CDY28777 Canola cytosol 53.59 51.71
CDY14319 Canola cytosol, plastid 53.24 51.12
CDY18321 Canola cytosol 53.15 50.95
CDX68955 Canola cytosol 20.22 45.0
CDX91798 Canola cytosol 18.93 43.45
CDY72648 Canola cytosol 9.33 39.71
CDX88973 Canola cytosol 30.25 29.79
CDY00546 Canola cytosol 30.16 29.06
CDX67724 Canola cytosol 29.56 27.92
CDX98274 Canola nucleus 29.65 27.62
CDX81833 Canola cytosol 34.4 27.17
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 34.31 26.19
CDY66597 Canola cytosol 34.05 25.89
CDY32922 Canola cytosol 33.71 25.88
CDY64313 Canola cytosol 33.79 25.71
CDY03315 Canola cytosol 32.67 25.7
CDY39766 Canola cytosol 32.58 25.65
CDX94736 Canola cytosol 33.71 25.52
CDY45087 Canola cytosol 34.14 25.5
CDX70927 Canola cytosol 34.23 25.45
CDX95235 Canola cytosol 33.62 25.33
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 33.71 25.32
CDY42350 Canola cytosol 32.76 25.22
CDY32531 Canola endoplasmic reticulum 32.93 25.22
CDY10075 Canola endoplasmic reticulum 32.84 25.08
CDY51846 Canola cytosol 34.14 24.98
CDX72393 Canola cytosol 32.15 24.7
CDY46128 Canola cytosol 32.07 24.7
CDY31130 Canola cytosol, mitochondrion 32.5 24.42
CDY31978 Canola cytosol 32.33 24.32
CDX84752 Canola cytosol 32.33 23.96
CDX79446 Canola cytosol 32.24 23.96
CDY05734 Canola cytosol 32.58 23.89
CDX79520 Canola endoplasmic reticulum 31.2 23.88
CDX75338 Canola cytosol 32.15 22.45
CDX84695 Canola cytosol 32.41 21.63
CDX93542 Canola cytosol 31.98 21.37
CDX95038 Canola cytosol 31.03 21.22
CDY15512 Canola cytosol 32.07 21.14
CDX86626 Canola cytosol 31.89 21.11
CDY19473 Canola cytosol 31.89 21.07
CDY65572 Canola plastid 33.45 20.36
CDY35211 Canola plastid 33.36 20.25
CDY17154 Canola cytosol 31.98 20.24
CDY69853 Canola endoplasmic reticulum 6.4 15.32
CDY65579 Canola endoplasmic reticulum 8.12 8.33
CDY71471 Canola cytosol 3.37 8.04
CDY16536 Canola cytosol 2.77 7.13
CDX92461 Canola cytosol 2.77 6.91
CDY69448 Canola extracellular, golgi, mitochondrion 1.56 5.45
CDX72394 Canola nucleus 0.09 0.1
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.2Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078GBN3UniProt:A0A078GBN3EnsemblPlants:CDY22791ProteinID:CDY22791ProteinID:CDY22791.1
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003779
GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016459GO:GO:0016787GO:GO:0051015EnsemblPlantsGene:GSBRNA2T00021131001InterPro:IPR000048InterPro:IPR001609
InterPro:IPR004009InterPro:IPR008989InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo8
InterPro:Myosin_NInterPro:Myosin_S1_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612
PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF685
SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EF40BFSEG:seg:
Description
BnaA06g02860DBnaA06g02860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBN3]
Coordinates
chrLK032136:+:42374..48420
Molecular Weight (calculated)
129906.0 Da
IEP (calculated)
8.806
GRAVY (calculated)
-0.423
Length
1157 amino acids
Sequence
(BLAST)
0001: MSHKVKPSVQ SLKSMPADYR FLGSPPLSDP LGNSSSGSSV SVTIPRNGHL KNGFKATADS IGGVDNGNED SPYSVSNGEV SSLVDGDLIV PLPQSTDRRW
0101: SDTSVYARKK VLQFWVQLPS GNWELGKVLS TSGEESVVKL PEGNVLKVIS ETLVPANPDI LDGVDDLMQL SYLNEPAVLY NLEYRYNQDM IYTKAGPVLV
0201: AVNPFKEVPL YGNSNIEAYR KRSNESPHVY AIADTAIREM IRDEVNQSII ISGESGAGKT ETAKIAMQYL AALGGGSGIE YEILKTNPIL EAFGNAKTLR
0301: NDNSSRFGKL IEIHFSETGK ISGAKVQTFL LEKSRVVQCA EGERSYHIFY QLCAGASPTL REKLNLTSAE EYKYLQQSNC YSINGVDDAE RFQAVTEALD
0401: IVHVSKEDQE SVFAMLAAVL WLGNVSFTVI DNENHVEPEE DESLSTVAKL IGCNINELKL ALSKRNMKVR NDTIVQKLTL PQAIDARDAL AKSIYACLFY
0501: WLVEQINKSL AVGKRRTGRS ISILDIYGFE SFDKNSFEQF CINYANERLQ QHFNRHLFKL EQEEYIQDGI DWTRVDFEDN QNCLSLFEKK PLGLLSLLDE
0601: ESTFPNGTDL TLANKLKEHL SANSCFRGDR GKAFTVSHYA GEVTYETTGF LEKNRDLLHS DSIKLLSSCS CHLPQAFASS MLIHSEKPVV GPLYKAGGAD
0701: SQRLSVATKF KDQLFQLMQR LGNTTPHFIR CIKPNNVQSP GLYEQGLVLQ QLRCCGVLEV VRISRSGFPT RMSHQKFARR YGFLLLESIA AKDPLSVSVA
0801: ILHQFNILPE MYQVGYTKLF FRTGQIGVLE DTRNRTLHGI LRLQSCFRGH QARSRLREHK RRVTVLQSFV RGEKVRKEYT ELLRRHRASA AIQSHVKRRI
0901: AKRQYKATVD ASVVIQSAIR GELVRRCAGD IGWLKSGGTK RNESDEVLVK ASVLSELQRR VLKSEAALRE KEEENDILRQ RLQQYDNRWS EYETKMKSME
1001: EIWQKQMRSL QSSLSIAKKS LEVEDSARNS DASVNASDAT ELSGSGGDFR THGRTRSVGV GLSVISRLAE EFGQRAQVFG DDTKFLMEVK SGQVEANLDP
1101: ERELRRLKQM FDTWKKDYGG RLRETKLILG KLGSEGGGGS AERVKMKWWG RLKSTRF
Best Arabidopsis Sequence Match ( AT1G50360.1 )
(BLAST)
0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY
Arabidopsis Description
VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.