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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17154 Canola cytosol 94.29 90.32
CDX84695 Canola cytosol 83.78 84.6
CDX79520 Canola endoplasmic reticulum 72.64 84.13
AT2G33240.1 Thale cress cytosol 84.07 83.16
CDY15512 Canola cytosol 75.84 75.67
CDX86626 Canola cytosol 75.27 75.4
CDX91798 Canola cytosol 20.45 71.03
CDY72648 Canola cytosol 10.79 69.49
VIT_00s0268g00030.t01 Wine grape cytosol 17.48 68.76
Os03t0860700-00 Rice cytosol, plasma membrane 34.09 67.15
VIT_05s0051g00050.t01 Wine grape cytosol 55.91 65.79
OQU85951 Sorghum cytosol 55.45 63.84
TraesCS6D01G377100.1 Wheat cytosol 54.37 63.05
TraesCS6B01G431400.1 Wheat cytosol 54.31 62.98
TraesCS6A01G390800.2 Wheat cytosol 54.31 62.98
CDY32922 Canola cytosol 54.2 62.97
HORVU6Hr1G091010.24 Barley cytosol 54.31 62.94
Zm00001d018481_P033 Maize cytosol 54.94 62.92
CDY64313 Canola cytosol 54.2 62.39
CDY32531 Canola endoplasmic reticulum 53.74 62.28
CDY10075 Canola endoplasmic reticulum 53.8 62.18
CDX68955 Canola cytosol 18.45 62.12
CDX94736 Canola cytosol 54.14 62.04
Os02t0816900-01 Rice cytosol, plasma membrane 44.77 61.78
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 54.03 61.43
Solyc09g091080.2.1 Tomato cytosol 56.82 61.19
VIT_16s0115g00220.t01 Wine grape cytosol 9.25 60.67
KRG89126 Soybean cytosol 54.31 60.15
GSMUA_AchrUn_... Banana cytosol 52.83 60.06
KXG34975 Sorghum cytosol 49.0 59.5
Zm00001d019495_P001 Maize cytosol 50.66 58.9
EER90459 Sorghum cytosol 49.86 58.83
GSMUA_Achr3P27420_001 Banana cytosol 55.74 58.48
Zm00001d034927_P001 Maize cytosol 49.8 58.37
TraesCS5B01G566200.1 Wheat cytosol 49.46 58.24
TraesCS1D01G174000.2 Wheat cytosol 50.14 58.18
TraesCS4A01G313500.1 Wheat cytosol 49.4 58.17
TraesCS1B01G183200.1 Wheat cytosol 50.03 58.01
HORVU1Hr1G044020.1 Barley cytosol 49.97 57.99
TraesCS1A01G166900.2 Wheat cytosol 49.97 57.95
CDY39766 Canola cytosol 48.6 57.89
CDY03315 Canola cytosol 48.54 57.78
TraesCS5D01G558600.1 Wheat cytosol 49.06 57.73
HORVU5Hr1G125430.15 Barley cytosol 48.37 57.54
KRH40872 Soybean cytosol 53.85 56.5
CDY66597 Canola cytosol 48.2 55.45
CDX81833 Canola cytosol 46.37 55.43
CDY31978 Canola cytosol 48.6 55.33
CDY42350 Canola cytosol 47.06 54.82
CDY31130 Canola cytosol, mitochondrion 48.2 54.81
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 47.4 54.75
CDX70927 Canola cytosol 48.6 54.69
CDX95235 Canola cytosol 47.97 54.69
CDY45087 Canola cytosol 48.37 54.68
CDY51846 Canola cytosol 48.54 53.76
CDY05734 Canola cytosol 48.32 53.61
CDX84752 Canola cytosol 46.26 51.89
CDX79446 Canola cytosol 46.09 51.83
CDX88973 Canola cytosol 34.67 51.66
VIT_04s0079g00370.t01 Wine grape cytosol 12.11 51.58
CDY00546 Canola cytosol 34.61 50.46
CDY35211 Canola plastid 54.25 49.84
CDY65572 Canola plastid 54.08 49.82
CDX67724 Canola cytosol 34.44 49.22
CDX98274 Canola nucleus 34.44 48.55
GSMUA_Achr1P03340_001 Banana cytosol 51.4 48.44
CDX93542 Canola cytosol 47.34 47.89
CDX95038 Canola cytosol 45.63 47.22
CDY46128 Canola cytosol 40.43 47.14
CDX72393 Canola cytosol 40.38 46.95
CDX75338 Canola cytosol 40.83 43.15
CDY71471 Canola cytosol 11.94 43.09
CDY69448 Canola extracellular, golgi, mitochondrion 6.74 35.76
CDY69853 Canola endoplasmic reticulum 9.54 34.58
CDY24591 Canola cytosol, plastid 21.93 33.13
CDX92461 Canola cytosol 8.62 32.61
CDY36068 Canola cytosol, mitochondrion 21.02 32.48
CDY42506 Canola cytosol, plastid 21.07 32.11
CDY65579 Canola endoplasmic reticulum 20.67 32.06
CDY22791 Canola cytosol, plastid 21.07 31.89
CDY29324 Canola cytosol 20.79 31.71
CDX82270 Canola cytosol 21.64 31.69
CDY16536 Canola cytosol 8.05 31.4
CDY52239 Canola cytosol 21.13 30.91
CDY53932 Canola cytosol, plastid 20.79 30.82
CDY28777 Canola cytosol 21.07 30.78
CDY18321 Canola cytosol 20.62 29.91
CDY14319 Canola cytosol, plastid 20.5 29.79
CDY25361 Canola cytosol 21.93 24.79
CDX72394 Canola nucleus 0.34 0.61
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078G459UniProt:A0A078G459EnsemblPlants:CDY19473ProteinID:CDY19473ProteinID:CDY19473.1
ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016459GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00009063001InterPro:IPR000048InterPro:IPR001609
InterPro:IPR002710InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11
InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612PFAM:PF01843
PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF256SMART:SM00015SMART:SM00242SMART:SM01132SUPFAM:SSF52540
UniParc:UPI0004EDFC16SEG:seg::::
Description
BnaC04g11260DBnaC04g11260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G459]
Coordinates
chrLK032096:-:477385..489051
Molecular Weight (calculated)
197492.0 Da
IEP (calculated)
5.209
GRAVY (calculated)
-0.491
Length
1751 amino acids
Sequence
(BLAST)
0001: MSRNKILVML RNDVFSNVSP AASVKVALGS YVWVEDTDEA WLDGEVVEAN DVEVKVKCET KTVTAKVNAV HPKDPEFPEL GVDDMTKLAY LHEPGLLLNL
0101: KSRYNANEIY TYTGNILIAV NPFKRLPHLY GNEIMERYKG SDFGDLSPHP FAVADSAYRK MINEGVSQAI LVSGESGAGK TESTKMLMQY LAYMGGKAES
0201: EGRSVEQQVL ESNPVLEAFG NAKTVRNNNS SRFGKFVEIQ FNQMGRISGA AIRTYLLERS RVCQVSDPER NYHCFYMLCA APEQEIERYK LGKPSTFHYL
0301: NQSNCHALSA FDDSKEYLDT RKAMDVVGIT SEEQDAIFRV VAAILHLGNI EFVKGEESDA AEPKDDKSRF HLKVAAELFM CDEKALEDSL CKRVMVTRGE
0401: SITKSLDPGS AALSRDALAK IVYSKLFDWL VTTINNSIGQ DPSSKYIIGV LDIYGFESFK TNSFEQFCIN LTNEKLQQHF NQHVFKMEQE EYTKEEIDWS
0501: YIEFIDNQDV LDLIEKKPGG IIALIDEACM FPRSTHETLA QKLYQTFNSH KRFTKPKLAR TDFTICHYAG DVTYQTELFL DKNKDYVVGE HQSLMNSSEC
0601: SFVSSLFPKP REESSKSSKF SSIGSQFKQQ LQSLLETLST TEPHYVRCVK PNNVLKPDIF ENLNVLHQLR CGGVMEAIRI SCAGYPTRKS FSEFLTRFRI
0701: LGPEATNKSF DEVNACKKLL AKVDLKGFQI GKTKVFLRAG QMAELDAHRA EALGHSARII QRKVLSYQSR KKYLMLQSAS TEIQAFCRGH VARLQFKSMR
0801: REAASLRIQK QARTYICQTA YKRLCVSAIY VQTGLRAMAA RVELQYRMKR RAAIIIQASL KPHFDDSDFS FVLSINNMKA AITTQCGWRV KIARRELLKL
0901: KMAAKETGAL QDAKNKLEKE LEELTSCLEL EKLMRMKLEE AKTQEVEELK AALDDMKLQL GETQETKSEE ILKLQSALQD MQLEFEELSK DLEMTHDLAS
1001: ENEHLKELVS SLQSKTDGSE TKYEETSKLS EGQIKQEVPV IDHDVIIKLE AENEQLKTLV SSLEKKIDAL DRKHEETSSN ITEQLKESAS SDYEIVSDLS
1101: AENERLKALV SSLEKKSNEN DGSDSPNEQK EGTHMLKEED SITDDVSVDN EMTNKLAAEN KELYDLVDLL EKKVQETEKK YEEASKLCEE RLQQVVDAET
1201: KLIGLKTSMQ MLEEKVSDME AEEKILRQQA LMINSASKKM SPQVSFSGPP PMENGHHVSL APIPSGKFGA MSFKRTLEQQ PHEYVDVLLS FVSQNIGFSH
1301: GKPVAAFTIY KCLIHWKLFE AEKTSIFDRI VPLFRSAIEN PEDNDNLTYW LTNTSTLLFL LQRSLKTHGT NGASANKPPQ PTSFFGRMTQ GFRSTSSESL
1401: SGDVVQQVDA RVPALLFRQQ LTAYVETIFG IFQENVKREL EPVLSSCIQG LKDSSHEPSA ENLPAESSEQ NSPAKPSEEI PPEKLSEGDS PAKPSKESPQ
1501: AKTPEENPQA KTSEESPQTK PSEENTEAKT SEENPSATPS AENTPAESWQ GITDLLNRLL GTLKKNYVPM FLAQKIFSQT FQGINVQVFN SLLERECCTY
1601: HMGKKVNAWF NELEAWCSQA TEEFVGSSWD ELKHTRQAVV LLVTEQKSKI TYDDLTSNLC PALSTQQLYR ICTFCKIDDN EDRNVSPGVI SNLKLLITDE
1701: DEDSRSFLLD NDSSVPFAAD EISNCMEEKE FANVKPAVAL ADNPNFHFLK G
Best Arabidopsis Sequence Match ( AT2G33240.4 )
(BLAST)
0001: MVWKHQLIGF SGIFSNVSPA SVKVTVGSQV WVEDPDEAWL DGEVVEANGQ EIKVNCQTKT VVAKVNAVHP KDPEFPELGV DDMTKLAYLH EPGVLLNLKA
0101: RYNANEIYTY TGNILIAVNP FKRLPHLYGN EIMEQYKGTD FGELSPHPFA VADSAYRKMI NEGVSQAILV SGESGAGKTE STKMLMQYLA YMGGKAESEG
0201: RSVEQQVLES NPVLEAFGNA KTVRNNNSSR FGKFVEIQFN HMGRISGAAI RTYLLERSRV CQVSDPERNY HCFYMLCAAP EQETERYQLG KPSTFHYLNQ
0301: SNCHALDAID DSKEYLATRK AMDVVGISPE EQDAIFRVVA AILHLGNIEF AKSEESDGAE PKDDKSRFHL KVAAKLFMCD EKALENSLCN RVMVTRGESI
0401: TKPLDPGSAA LSRDALAKIV YSKLFDWLVT KINNSIGQDS SSKYIIGVLD IYGFESFKTN SFEQFCINLT NEKLQQHFNQ HVFKMEQEEY TKEEIDWSYI
0501: EFIDNQDVLD LIEKKPGGII ALLDEACMFP RSTHDTLAEK LYQTFGSHKR FTKPKLARTD FTICHYAGDV TYQTELFLDK NKDYVVGEHQ SLMNSSDCSF
0601: VSSLFPKSRE ESSKSSKFSS IGSQFKQQLQ SLLETLNTTE PHYIRCVKPN NVLKPEIFEN VNVLHQLRCG GVMEAIRISC AGYPTRKPFN EFLTRFRILA
0701: PEATERSFDE VDACKKLLAR VDLKGFQIGK TKVFLRAGQM AELDAHRAEV LGHSARIIQR KVITYLSRKK YLLLQSASTE IQAFCRGHIA RVQFKATRRE
0801: AASVRIQKQA RTYICQTAFK KLCASAISIQ SGLRAMAARV EFQYRTKRKA AIIIQSQIRR CLCRRRYLRT KKAAITTQCG WRVKVAHREL RKLKMAAKET
0901: GALQDAKTKL EKEVEELTSC LELEKQMRME LEQVKTQEVE DLRSALNDMK LQLGETQVTK SEEILKLQSA LQDMQLEFEE LAKELEMTND LAAENEQLKD
1001: LVSSLQRKID ESDSKYEETS KLSEERVKQE VPVIDQGVII KLEAENQKLK ALVSTLEKKI DSLDRKHDVT SSNISDQLKE SASSDYEMLS NLAAENERLK
1101: ALVSSLENEN YENDGNDSPN EQKEGPQMLK EEILAEDFSI DDEMTNKLAA ENKDLYDLVD LLERKIDETE KKYEEASKLC EERLKQVVDT EKKYEEASRL
1201: CEERLKQVVD TETKLIELKT SMQRLEEKVS DMEAEDKILR QQALRNSASR KMSPQVSFTR PPPVENGHHE SFAPIPSRRF GAMSFRRSQI EQQPHEFVDV
1301: LLKCVSKNVG FSHGKPVAAF TIYKCLIHWK LFEAEKTSVF DRIVPIFGSA IENPEDDSNL AYWLTNTSTL LFLLQRSLKS HSTTGASPKK PPQPTSFFGR
1401: MTQGFRSPSS ASLSGDVVQQ VDARYPALLF KQQLTAYIET IYGIFQENVK RKLAPVLSSC IQGLKDSSHE FSAETLSAES SEQNSPEKPS EENPPEKLSE
1501: DNSSGKLSED YLAAKPSEDN SPAKPSEENS QAKLSEVNPQ AKPSAENSLA KPSEENSPTE TWQDVIGLLN QLLGTLKKNY VPLFLAQKIF CQTFQDINVQ
1601: LFNSLLQREC CTFIMGKKVN VWLNELESWC SQATEDFVGS SWDELKNTRQ ALVLLVTEQK STITYDDLTT NLCPALSTQQ LYRICTLCKI DDHEDQNVSP
1701: DVISNLKLLV TDEDEDSRSF LLDNNSSIPF AADEISNSMQ EKDFTNVKPA VELADNPNFH FLKE
Arabidopsis Description
XI-DMyosin-10 [Source:UniProtKB/Swiss-Prot;Acc:F4IVR7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.