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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 98.82 98.05
CDY64313 Canola cytosol 94.44 94.87
CDY32922 Canola cytosol 93.39 94.69
AT5G43900.3 Thale cress cytosol 93.19 90.99
CDY32531 Canola endoplasmic reticulum 83.44 84.38
CDY10075 Canola endoplasmic reticulum 83.18 83.89
Solyc09g064200.2.1 Tomato plastid 75.72 76.42
PGSC0003DMT400056647 Potato cytosol 75.39 76.09
KRH32270 Soybean cytosol 75.13 75.83
VIT_07s0005g04790.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 75.33 75.82
KRH19659 Soybean cytosol 75.2 75.64
KRG95788 Soybean cytosol 75.07 75.61
KRH67505 Soybean cytosol 74.8 75.6
Solyc06g008090.2.1 Tomato cytosol 71.6 73.72
CDX91798 Canola cytosol 24.02 72.82
OQU85951 Sorghum cytosol 72.19 72.52
TraesCS6A01G390800.2 Wheat cytosol 71.53 72.38
TraesCS6B01G431400.1 Wheat cytosol 71.53 72.38
TraesCS6D01G377100.1 Wheat cytosol 71.47 72.32
HORVU6Hr1G091010.24 Barley cytosol 71.07 71.87
Zm00001d018481_P033 Maize cytosol 71.6 71.55
Os02t0816900-01 Rice cytosol, plasma membrane 59.1 71.16
CDY72648 Canola cytosol 12.3 69.12
Os03t0860700-00 Rice cytosol, plasma membrane 39.79 68.39
GSMUA_AchrUn_... Banana cytosol 68.19 67.66
PGSC0003DMT400038143 Potato cytosol 37.43 67.14
CDY39766 Canola cytosol 64.33 66.87
CDY03315 Canola cytosol 64.27 66.76
GSMUA_Achr3P27420_001 Banana cytosol 72.45 66.33
KXG34975 Sorghum cytosol 62.43 66.16
Zm00001d019495_P001 Maize cytosol 64.53 65.47
CDX68955 Canola cytosol 22.19 65.19
TraesCS1D01G174000.2 Wheat cytosol 63.55 64.35
TraesCS1A01G166900.2 Wheat cytosol 63.48 64.24
EER90459 Sorghum cytosol 62.37 64.22
HORVU1Hr1G044020.1 Barley cytosol 63.22 64.02
TraesCS1B01G183200.1 Wheat cytosol 63.15 63.91
Zm00001d034927_P001 Maize cytosol 62.43 63.86
CDY31978 Canola cytosol 63.94 63.52
HORVU5Hr1G125430.15 Barley cytosol 60.34 62.64
TraesCS5D01G558600.1 Wheat cytosol 60.99 62.63
TraesCS5B01G566200.1 Wheat cytosol 60.93 62.61
TraesCS4A01G313500.1 Wheat cytosol 60.93 62.61
CDY66597 Canola cytosol 61.91 62.16
CDY05734 Canola cytosol 63.87 61.85
CDY45087 Canola cytosol 62.04 61.2
CDX70927 Canola cytosol 62.3 61.18
CDY31130 Canola cytosol, mitochondrion 61.26 60.78
CDX95235 Canola cytosol 60.86 60.55
CDX81833 Canola cytosol 57.98 60.48
CDY42350 Canola cytosol 59.42 60.41
CDY51846 Canola cytosol 62.3 60.22
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 59.69 60.16
CDY65572 Canola plastid 73.43 59.02
CDY71471 Canola cytosol 18.72 58.97
CDY35211 Canola plastid 73.43 58.87
CDX84752 Canola cytosol 58.38 57.14
CDX79446 Canola cytosol 58.05 56.97
CDX79520 Canola endoplasmic reticulum 54.91 55.49
CDY15512 Canola cytosol 63.22 55.04
CDX86626 Canola cytosol 62.83 54.92
CDX84695 Canola cytosol 61.98 54.61
CDY19473 Canola cytosol 62.04 54.14
GSMUA_Achr1P03340_001 Banana cytosol 65.25 53.66
CDX88973 Canola cytosol 41.03 53.36
CDX93542 Canola cytosol 60.14 53.09
CDY46128 Canola cytosol 51.57 52.46
CDY00546 Canola cytosol 41.03 52.21
CDX95038 Canola cytosol 57.66 52.07
CDX72393 Canola cytosol 51.24 51.99
CDY17154 Canola cytosol 61.78 51.64
CDX67724 Canola cytosol 41.16 51.35
CDX98274 Canola nucleus 41.16 50.64
CDY69448 Canola extracellular, golgi, mitochondrion 10.54 48.79
CDX75338 Canola cytosol 52.23 48.16
CDY69853 Canola endoplasmic reticulum 12.76 40.37
CDX92461 Canola cytosol 12.04 39.74
CDY16536 Canola cytosol 11.65 39.64
CDY65579 Canola endoplasmic reticulum 29.06 39.33
CDY24591 Canola cytosol, plastid 26.24 34.6
CDY36068 Canola cytosol, mitochondrion 25.46 34.33
CDY29324 Canola cytosol 25.72 34.23
CDY42506 Canola cytosol, plastid 25.46 33.86
CDY22791 Canola cytosol, plastid 25.52 33.71
CDX82270 Canola cytosol 26.24 33.53
CDY53932 Canola cytosol, plastid 25.65 33.19
CDY52239 Canola cytosol 25.07 32.0
CDY18321 Canola cytosol 25.13 31.81
CDY28777 Canola cytosol 24.93 31.78
CDY14319 Canola cytosol, plastid 24.87 31.54
CDY25361 Canola cytosol 26.44 26.08
CDX72394 Canola nucleus 0.2 0.3
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078DZX9EnsemblPlants:CDX94736ProteinID:CDX94736ProteinID:CDX94736.1ncoils:Coil
InterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005856GO:GO:0007015GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987
GO:GO:0016043GO:GO:0016459GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00158158001InterPro:IPR000048InterPro:IPR001609
InterPro:IPR002710InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11
InterPro:MyosinXI_CBDInterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612
PFAM:PF01843PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51126PFscan:PS51456
PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF256SMART:SM00015SMART:SM00242SMART:SM01132
SUPFAM:SSF52540UniParc:UPI0004EDB74FSEG:seg:::
Description
BnaC07g17450D
Coordinates
chrLK031884:-:536753..547267
Molecular Weight (calculated)
172083.0 Da
IEP (calculated)
6.897
GRAVY (calculated)
-0.317
Length
1528 amino acids
Sequence
(BLAST)
0001: MIIVVCLDPD SVSEDSDLPN EMAGNFNPTV GSCVWVEDPD EAWIDGEVVE VNGQEIKVLC TSGKHVVTKA SSVYPKDTEA PASGVDDMTR LAYLHEPGVL
0101: QNLHSRYDIN EIYTYTGSIL IAVNPFRRLP HLYSSHMMAQ YKGAALGELS PHPFAVADAA YRQMINDGVS QSILVSGESG AGKTESTKLL MRYLAYMGGR
0201: AASEGRSVEQ KVLESNPVLE AFGNAKTVRN NNSSRFGKFV EIQFDEKGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPKEDVQ RYKLGEPKTY
0301: HYLNQSKCLA VESINDAEEY QATRRAMEVV GISTEEQDAI FSVVAAILHL GNIEFSKGAE IDSSIPKDEK SLFHLKTAAE LLSCDEKLLE DSLCKRIMVT
0401: RDETITKTLD PEAATLSRDA LAKVMYSRLF DWLVDKINTS IGQDPHSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI
0501: NWSYIEFVDN QDILDLIEKK PGGIIALLDE ACMFPRSTHE TFAQKLYQTF KNHKRFAKPK LARSDFTICH YAGDVTYQTD LFLDKNKDYV IAEHQALLNS
0601: SSCSFVASLF PPMSDDSNKS KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENENILQQ LRCGGVMEAI RISCAGYPTR KHFDEFLDRF
0701: GILAPEVLVK NSDDPDACKK LLAKVGLEGY QIGKTKVFLR AGQMADLDTR RTEVLGRSAS IIQRKVRSYL AKKSFILLRN AAKQIQSVCR GYLARSVYEG
0801: MRREAAALRI QRDLRMFLAR KAYTELFSAA VSVQAGMRGM VARNDLCFRR QTKAAIIIQT WCRGYLARLH YRKLKKATIT TQCAWRSKIA RGELRKLKMA
0901: ARETGALQAA KNKLEKQVEE LTWRLQLEKR MRTDLEEAKK QESAKAQSSL EELELRCKET EALLIKEREA AKKVSEIAPV IKEVPVVDNE LMEKITSENE
1001: KLKEMVSSLE MKIDETEKKI QETTKISQDR LKQALEAESK LVKLTTAMQR LEEKILDMEA EKKVMRQQTI ASTPVRTALG HPPTAPIKNL ENGHHTNLES
1101: EFNEAEFATP IDGNAGKSAA ERQIMDVDAL IDCVKDNIGF SDNGKPVAAF TIYKCLLHWK CFESEKTNVF DRLIQMIGSA IENEDDNSHL AYWLTSTSAL
1201: LFLLEKSLKT SGSGATQSKK PPASTSLFGR MAMSFRSSPA SGNLAAAAEA AANAVIRPVE AKYPALLFKQ QLAAYVEKMF GMVRDNLKKE LSTLLSLCIQ
1301: APRTSKGGML RSGRSFGKDS PAVHWQSIID CLNSLLVTLK GNHVPLVLIQ KIYSQTFSFI NVQLFNSLLL RKECCTFSNG EFVKSGLAEL ELWCCQAKEY
1401: AGPSWEELKQ IRQAVGFLVI HQKYRISYDE IAHDLCPGLS VQQLYRICTL YWDDSYNTRS VSQEVISSMR ALMTEESNDA DSDSFLLDDD SSIPFSIEDI
1501: SSSMQEKDFV GIKPAEELLE NPAFVFLH
Best Arabidopsis Sequence Match ( AT5G43900.3 )
(BLAST)
0001: MFLDAAKSDS RFSVCVCDTV LLYVYHVNKT KSPQKVEESR EARKGKNKIQ KAEVFDLRNE MVANFNPSVG SFVWVEDPDE AWIDGEVVQV NGDEIKVLCT
0101: SGKHVVTKIS NAYPKDVEAP ASGVDDMTRL AYLHEPGVLQ NLHSRYDINE IYTYTGSILI AVNPFRRLPH LYSSHMMAQY KGASLGELSP HPFAVADAAY
0201: RQMINDGVSQ SILVSGESGA GKTESTKLLM RYLAYMGGRA AAEGRSVEQK VLESNPVLEA FGNAKTVRNN NSSRFGKFVE IQFDEKGRIS GAAIRTYLLE
0301: RSRVCQVSDP ERNYHCFYML CAAPQEDVKK FKLEEPKKYH YLNQSKCLEL DSINDAEEYH ATRRAMDVVG ISTEEQDAIF SVVAAILHIG NIEFAKGEEI
0401: DSSIPKDDKS LFHLKTAAEL LSCDEKALED SLCKRIMVTR DETITKTLDP EAATLSRDAL AKVMYSRLFD WLVDKINSSI GQDHDSKYLI GVLDIYGFES
0501: FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYKKEEIN WSYIEFVDNQ DILDLIEKKP GGIIALLDEA CMFPRSTHET FAQKLYQTFK THKRFTKPKL
0601: ARSDFTICHY AGDVTYQTEL FLDKNKDYVI AEHQALLNSS SCSFVASLFP PMSDDSKQSK FSSIGTRFKQ QLVSLLEILN TTEPHYIRCI KPNNLLKPGI
0701: FENENILQQL RCGGVMEAIR ISCAGYPTRK HFDEFLARFG ILAPEVLVKN SDDPAACKKL LDKVGLEGYQ IGKTKVFLRA GQMADLDTRR TEVLGRSASI
0801: IQRKVRSYLA KKSFIVLRNS AKQIQSVCRG YLARSVYEGM RREAAALKIQ RDLRRFLARK AYTELYSAAV SVQAGMRGMV ARKELCFRRQ TKAAIIIQTW
0901: CRGYLARLHY RKLKKAAITT QCAWRSKVAR GELRKLKMAA RETGALQAAK NKLEKQVEEL TWRLQLEKRI RTDLEEAKKQ ESAKAQSSLE ELQLKCKETE
1001: ALLIKEREAA KKIAETAPII KEIPVVDQEL MDKITNENEK LKSMVSSLEM KIGETEKKLQ ETTKISQDRL NQALEAESKL VKLKTAMQRL EEKILDMEAE
1101: KKIMHQQTIS TPVRTNLGHP PTAPVKNLEN GHQTNLEKEF NEAEFTTPVD GKAGKSAAER QIMNVDALID CVKDNIGFSN GKPVAAFTIY KCLLHWKCFE
1201: SEKTNVFDRL IQMIGSAIEN EDDNSHLAYW LTSTSALLFL LQKSLKTNGS GATQSKKPPA STSLFGRMAM SFRSSPASGN LAAAAEAAAL AVVRPVEAKY
1301: PALLFKQQLA AYVEKMFGMV RDNLKRELST LLSLCIQAPR SSKGGMLRSG RSFGKDSPAV HWQSIIDGLN SLLVTLKENH VPLVLIQKIY SQTFSYINVQ
1401: LFNSLLLRKE CCTFSNGEFV KSGLAELELW CCQAKEYSGP SWEELKHIRQ AVGFLVIHQK YRISYDEIAN DLCPVLSVQQ LYRICTLYWD DSYNTRSVSQ
1501: EVISSMRTLM TEESNDADSD SFLLDDDSSI PFSIDDISSS MEEKDFVGIK PAEELLENPA FVFLH
Arabidopsis Description
MYA2Myosin 2 [Source:UniProtKB/TrEMBL;Acc:F4K7C5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.