Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS4A01G137900.1 | |
| TraesCS4B01G148100.1 | |
| TraesCS4D01G153300.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G04600.1 | TraesCS4A01G137900.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4B01G148100.1 | AT4G26630.1 | 25387881 |
| AT1G04600.1 | TraesCS4D01G153300.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G377100.1 | Wheat | cytosol | 99.6 | 99.6 |
| TraesCS6B01G431400.1 | Wheat | cytosol | 99.4 | 99.4 |
| HORVU6Hr1G091010.24 | Barley | cytosol | 98.61 | 98.54 |
| OQU85951 | Sorghum | cytosol | 91.99 | 91.32 |
| Os02t0816900-01 | Rice | cytosol, plasma membrane | 76.69 | 91.25 |
| Zm00001d018481_P033 | Maize | cytosol | 90.79 | 89.67 |
| PGSC0003DMT400056647 | Potato | cytosol | 76.16 | 75.96 |
| Solyc09g064200.2.1 | Tomato | plastid | 76.09 | 75.89 |
| VIT_07s0005g04790.t01 | Wine grape | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 75.83 | 75.43 |
| KRH32270 | Soybean | cytosol | 75.3 | 75.1 |
| KRH19659 | Soybean | cytosol | 75.3 | 74.85 |
| KRH67505 | Soybean | cytosol | 74.04 | 73.94 |
| KRG95788 | Soybean | cytosol | 74.17 | 73.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 74.97 | 73.51 |
| Solyc06g008090.2.1 | Tomato | cytosol | 72.12 | 73.38 |
| GSMUA_Achr3P27420_001 | Banana | cytosol | 80.73 | 73.04 |
| VIT_00s0268g00030.t01 | Wine grape | cytosol | 21.39 | 72.58 |
| CDY32922 | Canola | cytosol | 72.12 | 72.26 |
| VIT_05s0051g00050.t01 | Wine grape | cytosol | 71.13 | 72.18 |
| AT1G04160.1 | Thale cress | cytosol | 71.52 | 72.0 |
| Bra027512.1-P | Field mustard | cytosol | 58.54 | 71.87 |
| CDY64313 | Canola | cytosol | 72.12 | 71.6 |
| CDX94736 | Canola | cytosol | 72.38 | 71.53 |
| Bra032526.1-P | Field mustard | cytosol | 70.53 | 70.81 |
| CDY22325 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 72.19 | 70.78 |
| CDY10075 | Canola | endoplasmic reticulum | 70.73 | 70.5 |
| CDY32531 | Canola | endoplasmic reticulum | 70.4 | 70.35 |
| Bra011053.1-P | Field mustard | cytosol | 69.8 | 69.99 |
| AT5G43900.3 | Thale cress | cytosol | 71.92 | 69.39 |
| AT4G28710.1 | Thale cress | cytosol | 68.68 | 68.4 |
| TraesCS1A01G166900.2 | Wheat | cytosol | 67.81 | 67.81 |
| PGSC0003DMT400038143 | Potato | cytosol | 38.15 | 67.61 |
| Bra033704.1-P | Field mustard | cytosol, plastid | 72.12 | 65.68 |
| Bra036688.1-P | Field mustard | cytosol | 61.85 | 64.64 |
| TraesCS4A01G313500.1 | Wheat | cytosol | 63.38 | 64.36 |
| AT2G20290.1 | Thale cress | endoplasmic reticulum | 63.58 | 64.3 |
| CDY39766 | Canola | cytosol | 62.05 | 63.74 |
| VIT_16s0115g00220.t01 | Wine grape | cytosol | 11.26 | 63.67 |
| CDY03315 | Canola | cytosol | 61.99 | 63.63 |
| TraesCS3A01G209500.1 | Wheat | cytosol | 63.38 | 62.8 |
| Bra036460.1-P | Field mustard | cytosol | 61.72 | 62.63 |
| Solyc09g091080.2.1 | Tomato | cytosol | 66.95 | 62.18 |
| KRG89126 | Soybean | cytosol | 64.11 | 61.23 |
| CDY31978 | Canola | cytosol | 61.52 | 60.4 |
| CDY05734 | Canola | cytosol | 61.66 | 59.0 |
| TraesCS5A01G386500.1 | Wheat | cytosol | 60.2 | 58.42 |
| KRH40872 | Soybean | cytosol | 64.11 | 58.0 |
| AT1G04600.1 | Thale cress | cytosol | 65.1 | 56.82 |
| CDY65572 | Canola | plastid | 69.74 | 55.39 |
| CDX86626 | Canola | cytosol | 64.04 | 55.32 |
| CDY35211 | Canola | plastid | 69.74 | 55.25 |
| VIT_04s0079g00370.t01 | Wine grape | cytosol | 15.03 | 55.23 |
| CDY15512 | Canola | cytosol | 63.97 | 55.04 |
| Bra030576.1-P | Field mustard | cytosol | 61.52 | 54.94 |
| CDX79520 | Canola | endoplasmic reticulum | 54.9 | 54.83 |
| AT2G33240.1 | Thale cress | cytosol | 63.97 | 54.58 |
| CDX84695 | Canola | cytosol | 62.45 | 54.38 |
| CDY19473 | Canola | cytosol | 62.98 | 54.31 |
| TraesCS6A01G336500.1 | Wheat | cytosol | 52.05 | 52.51 |
| CDY17154 | Canola | cytosol | 63.05 | 52.08 |
| TraesCS1A01G358500.1 | Wheat | cytosol | 50.93 | 36.92 |
| TraesCS3A01G248800.7 | Wheat | cytosol | 55.56 | 35.09 |
| TraesCS3A01G058100.1 | Wheat | cytosol | 18.34 | 34.97 |
| TraesCS1A01G162800.1 | Wheat | mitochondrion | 25.56 | 32.22 |
| TraesCS2A01G204700.1 | Wheat | cytosol, plastid | 25.76 | 30.8 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | Gene3D:2.30.30.360 | MapMan:20.2.4.1 |
| Gene3D:3.30.70.3240 | Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003774 | GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007015 | GO:GO:0007018 |
| GO:GO:0008017 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016459 | GO:GO:0016787 |
| GO:GO:0051015 | InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 | InterPro:IPR004009 | InterPro:IPR008989 |
| InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS | InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:MyosinXI_CBD | InterPro:Myosin_N |
| InterPro:Myosin_S1_N | InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase | PFAM:PF00063 | PFAM:PF00612 | PFAM:PF01843 |
| PFAM:PF02736 | PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 | PFscan:PS51456 | PFscan:PS51844 |
| PANTHER:PTHR13140 | PANTHER:PTHR13140:SF256 | SMART:SM00015 | SMART:SM00242 | SMART:SM01132 | SUPFAM:SSF52540 |
| EnsemblPlantsGene:TraesCS6A01G390800 | EnsemblPlants:TraesCS6A01G390800.2 | TIGR:cd01384 | TIGR:cd15475 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:605545157..605558328
Molecular Weight (calculated)
171293.0 Da
IEP (calculated)
7.884
GRAVY (calculated)
-0.415
Length
1510 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAQASIAVG SQVWVEDPDE AWIDGEVLKV NGDTITVKCS NEKTVTAKAS HVHAKDPEES PCGVDDMTKL AYLHEPGVLQ NLKSRYDMNE IYTYTGSILI
0101: AVNPFRRLPH LYDIQMMEQY KGADFGELSP HPFAVADVAY RLMLNEGISQ SILVSGESGA GKTESTKMIM RYLAYMGGKA ASEGRTVEKQ VLQSNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDQKGRIS GAAVRTYLLE RSRVCQISES ERNYHCFYMI CAGSPEEQEK YKLGDPSTFH YLNQSNCYKI DGLDESKEYL
0301: ETRKAMDIIG ISSEEQEAIF RIVAAILHLG NVEFAEGDDV DSSKPKNEKS MFHLRTAAEL FMCDEKALED SLCKRIIVTR DENIVKTLDA EAAKGSRDAL
0401: AKTVYSRLFD WLVTKINNSI GQDPTSKCLI GVLDIYGFES FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEID WSYIEFVDNQ DILDLIDKKP
0501: GGIIALLDEA CMLPRSTHET FAQKLYQTFK NHKRFVKPKL SRSDFTICHY AGDVTYQTEL FLDKNKDYVI AEHQALLGAS GCSFVSGLFP LLSDDSSKSS
0601: KFSSIGSRFK QQLQSLLETL SSTEPHYIRC VKPNSLLKPA IFENQNVLQQ LRCGGVMEAI RISCAGYPTR RTFLEFIDRF GILAPDVLTG SSDEITAVRR
0701: LLEKVDLQGY QVGKTKVFLR SGQMAELDAR RNEVLGRSAN MIQRKVRSFL AKKSFIALRR SAVQIQTVCR GELARRVYQG LRREAASLKI QTRYRMHNAR
0801: KAYTELSASA LTIQSSLRGM AARKEIHFRR QTRAAIIIQT RCRQFLARLA YSRTRKAAIT TQCFWRGKVA RKELRKLKLA ARETGALQAA KNKLEKQVEE
0901: LTWRLQLEKR MRADLEESKS QENAKLQAAL QEVQQQYKET KDTLVKEREA AKKVAKIAPV IKEVPVIDTE LMNKLRDEND KLKTLVSSLE KKIDDTEKKY
1001: DETNKISEER LKKAMDAESK IDDLNMAMLR LQEKISNMET DEKVQRQALL STPVRSMSEH LSIPIVPKNL ENGYHEAEEP KEPQSAPPAL KDYGNGDPKL
1101: RKSSAEKQQE NVDALIDCVA KNLGYCEGKP VAAFTIYKCL LHWKSFEAEK TSVFDRLIQL IGSAIENEED NDNLAYWLSN TSSLLFLLQR SLKAAGAPGT
1201: VSRKKPPQPT SLFGRMAQGL RSASFANMHV EATDVVRQVE AKYPALLFKQ QLTAYVEKIY GIIRDNIKKE LSSLISLCIQ APRTMKASML RISGRSSGQT
1301: QSNHWQKIIE NLDILLKILQ DNHVPPVLAQ KIFTQIFSYI NVQLFNSLLL RRECCSFSNG EYVKAGLAEL ELWCAKATSE YAASSWDEIR HIRQAVGFLV
1401: IFQKFRISYD EIVHDLCPIL SVQQLYRICT QYWDDKYNTQ SVSSDVLSNM RVLMTEDSNN AESSSFLLDD NSSIPFSVED ITNAIQEKDF SDVKPAEELL
1501: ENPAFQFLQD
0101: AVNPFRRLPH LYDIQMMEQY KGADFGELSP HPFAVADVAY RLMLNEGISQ SILVSGESGA GKTESTKMIM RYLAYMGGKA ASEGRTVEKQ VLQSNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDQKGRIS GAAVRTYLLE RSRVCQISES ERNYHCFYMI CAGSPEEQEK YKLGDPSTFH YLNQSNCYKI DGLDESKEYL
0301: ETRKAMDIIG ISSEEQEAIF RIVAAILHLG NVEFAEGDDV DSSKPKNEKS MFHLRTAAEL FMCDEKALED SLCKRIIVTR DENIVKTLDA EAAKGSRDAL
0401: AKTVYSRLFD WLVTKINNSI GQDPTSKCLI GVLDIYGFES FKTNSFEQFC INLTNEKLQQ HFNQHVFKME QEEYTKEEID WSYIEFVDNQ DILDLIDKKP
0501: GGIIALLDEA CMLPRSTHET FAQKLYQTFK NHKRFVKPKL SRSDFTICHY AGDVTYQTEL FLDKNKDYVI AEHQALLGAS GCSFVSGLFP LLSDDSSKSS
0601: KFSSIGSRFK QQLQSLLETL SSTEPHYIRC VKPNSLLKPA IFENQNVLQQ LRCGGVMEAI RISCAGYPTR RTFLEFIDRF GILAPDVLTG SSDEITAVRR
0701: LLEKVDLQGY QVGKTKVFLR SGQMAELDAR RNEVLGRSAN MIQRKVRSFL AKKSFIALRR SAVQIQTVCR GELARRVYQG LRREAASLKI QTRYRMHNAR
0801: KAYTELSASA LTIQSSLRGM AARKEIHFRR QTRAAIIIQT RCRQFLARLA YSRTRKAAIT TQCFWRGKVA RKELRKLKLA ARETGALQAA KNKLEKQVEE
0901: LTWRLQLEKR MRADLEESKS QENAKLQAAL QEVQQQYKET KDTLVKEREA AKKVAKIAPV IKEVPVIDTE LMNKLRDEND KLKTLVSSLE KKIDDTEKKY
1001: DETNKISEER LKKAMDAESK IDDLNMAMLR LQEKISNMET DEKVQRQALL STPVRSMSEH LSIPIVPKNL ENGYHEAEEP KEPQSAPPAL KDYGNGDPKL
1101: RKSSAEKQQE NVDALIDCVA KNLGYCEGKP VAAFTIYKCL LHWKSFEAEK TSVFDRLIQL IGSAIENEED NDNLAYWLSN TSSLLFLLQR SLKAAGAPGT
1201: VSRKKPPQPT SLFGRMAQGL RSASFANMHV EATDVVRQVE AKYPALLFKQ QLTAYVEKIY GIIRDNIKKE LSSLISLCIQ APRTMKASML RISGRSSGQT
1301: QSNHWQKIIE NLDILLKILQ DNHVPPVLAQ KIFTQIFSYI NVQLFNSLLL RRECCSFSNG EYVKAGLAEL ELWCAKATSE YAASSWDEIR HIRQAVGFLV
1401: IFQKFRISYD EIVHDLCPIL SVQQLYRICT QYWDDKYNTQ SVSSDVLSNM RVLMTEDSNN AESSSFLLDD NSSIPFSVED ITNAIQEKDF SDVKPAEELL
1501: ENPAFQFLQD
0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH
Arabidopsis Description
XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.