Factsheet for GSMUA_Achr3P27420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0816900-01	Rice	cytosol, plasma membrane	61.65	81.09
TraesCS6D01G377100.1	Wheat	cytosol	73.1	80.79
TraesCS6A01G390800.2	Wheat	cytosol	73.04	80.73
OQU85951	Sorghum	cytosol	73.46	80.6
TraesCS6B01G431400.1	Wheat	cytosol	72.92	80.6
HORVU6Hr1G091010.24	Barley	cytosol	72.86	80.48
Zm00001d018481_P033	Maize	cytosol	73.04	79.73
GSMUA_AchrUn_...	Banana	cytosol	73.34	79.48
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	71.84	78.99
PGSC0003DMT400056647	Potato	cytosol	71.3	78.6
Solyc09g064200.2.1	Tomato	plastid	71.18	78.47
KRH19659	Soybean	cytosol	71.36	78.41
KRH32270	Soybean	cytosol	71.12	78.4
KRH67505	Soybean	cytosol	70.52	77.84
KRG95788	Soybean	cytosol	70.28	77.32
Solyc06g008090.2.1	Tomato	cytosol	67.89	76.35
VIT_05s0051g00050.t01	Wine grape	cytosol	67.23	75.4
VIT_00s0268g00030.t01	Wine grape	cytosol	19.89	74.61
CDY32922	Canola	cytosol	66.03	73.13
AT1G04160.1	Thale cress	cytosol	65.31	72.67
CDY64313	Canola	cytosol	66.09	72.52
CDX94736	Canola	cytosol	66.33	72.45
Bra032526.1-P	Field mustard	cytosol	65.25	72.41
CDY32531	Canola	endoplasmic reticulum	65.25	72.07
Bra027512.1-P	Field mustard	cytosol	53.09	72.03
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.27	71.82
Bra011053.1-P	Field mustard	cytosol	64.77	71.78
CDY10075	Canola	endoplasmic reticulum	65.13	71.75
GSMUA_Achr7P26040_001	Banana	cytosol	22.59	70.86
AT5G43900.3	Thale cress	cytosol	66.33	70.73
AT4G28710.1	Thale cress	cytosol	64.05	70.51
PGSC0003DMT400038143	Potato	cytosol	35.59	69.72
Bra033704.1-P	Field mustard	cytosol, plastid	66.39	66.83
Bra036688.1-P	Field mustard	cytosol	57.64	66.57
AT2G20290.1	Thale cress	endoplasmic reticulum	58.96	65.91
CDY39766	Canola	cytosol	57.94	65.78
CDY03315	Canola	cytosol	57.94	65.74
VIT_16s0115g00220.t01	Wine grape	cytosol	10.49	65.54
GSMUA_Achr8P26250_001	Banana	cytosol	60.04	65.45
Solyc09g091080.2.1	Tomato	cytosol	62.97	64.64
Bra036460.1-P	Field mustard	cytosol	57.34	64.31
GSMUA_AchrUn_...	Banana	cytosol	34.33	64.31
GSMUA_Achr5P09720_001	Banana	cytosol	59.68	63.72
KRG89126	Soybean	cytosol	59.68	63.0
GSMUA_Achr4P14090_001	Banana	cytosol	57.82	62.1
CDY31978	Canola	cytosol	57.22	62.09
CDY05734	Canola	cytosol	57.4	60.71
GSMUA_Achr1P03340_001	Banana	cytosol	66.69	59.9
GSMUA_Achr3P30890_001	Banana	cytosol	57.76	59.88
KRH40872	Soybean	cytosol	59.38	59.38
GSMUA_Achr4P07570_001	Banana	plastid	56.38	59.07
AT1G04600.1	Thale cress	cytosol	60.93	58.79
CDY65572	Canola	plastid	64.89	56.97
CDX86626	Canola	cytosol	59.38	56.69
CDY35211	Canola	plastid	64.71	56.66
CDY15512	Canola	cytosol	59.56	56.64
Bra030576.1-P	Field mustard	cytosol	57.04	56.3
VIT_04s0079g00370.t01	Wine grape	cytosol	13.78	55.96
CDX84695	Canola	cytosol	58.0	55.82
CDY19473	Canola	cytosol	58.48	55.74
AT2G33240.1	Thale cress	cytosol	58.96	55.59
CDX79520	Canola	endoplasmic reticulum	50.27	55.49
CDY17154	Canola	cytosol	58.18	53.12
GSMUA_Achr7P26030_001	Banana	cytosol	36.43	50.92
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	59.86	49.83
GSMUA_Achr3P07960_001	Banana	cytosol	48.65	49.63
GSMUA_Achr1P01870_001	Banana	cytosol	23.91	31.47
GSMUA_Achr2P10680_001	Banana	cytosol	22.71	30.03
GSMUA_Achr8P03790_001	Banana	cytosol	23.25	28.66

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:3.30.70.3240	Gene3D:3.40.850.10
MapMan:35.1	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774
GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018
GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459	GO:GO:0016787
EnsemblPlantsGene:GSMUA_Achr3G27420_001	EnsemblPlants:GSMUA_Achr3P27420_001	EnsemblPlants:GSMUA_Achr3T27420_001	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710
InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M0SIA8	InterPro:MYSc_Myo11
InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PFAM:PF01843	PFAM:PF02736	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456
PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256	SMART:SM00015	SMART:SM00242	SMART:SM01132
SUPFAM:SSF52540	UniParc:UPI000294A5D7	SEG:seg	:	:	:

Description

myosin, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G27420_001]

Coordinates

chr3:-:26958410..26980891

Molecular Weight (calculated)

189398.0 Da

IEP (calculated)

8.725

GRAVY (calculated)

-0.329

Length

1669 amino acids

Sequence
(BLAST)

0001: MFTNFNGQAT KFNIAVGSQV WVEDAEVAWI DGEVLEIKGD EIKISCTSGK MVTAKLSNVH PKDPEASPCG VDDMTKLAYL HEPGVLQNLR SRYDTNEIYT
0101: YTGNILIAVN PFRRLPHLYD NHMMEQYKGA AFGELSPHPF AVADAAYRLM RNEGVNQSIL VSGESGAGKT ESTKMIMRYL AYMGGRAASE GRTVEQQVLQ
0201: SNPVLEAFGN AKTVRNNNSS RFGKFVEIQF DQSGRISGAA IRTYLLERSR VCQISDPERN YHCFYMLCAA PAEDIQRYKL ENPRTFHYLN QSNCYELDGV
0301: DDSREYLETK KAMDIIGIST DEQDGIFRVV AAILHLGNIE FTDGKEIDSS QPKNEKSWFH LRTAAELFMC DAKALEDSLC KRVIVTRDEN IIKTLDPEAA
0401: ALSRDSLAKI VYSRLFDWLV NKINSSIGQD PNSKCLIGVL DIYGFESFKT NSFEQFCINL TNEKLQQHFN QHVFKMEQEE YTKEEISWSY IEFVDNQDIL
0501: DLIEKHVHGP TSGGIKIISP VRVHLFIYSV QKPGGIIALL DEACMLPRST HETFAQKLYQ AFKNHKRFSK PKLSRSDFTV SHYAGDVTYQ TELFLDKNKD
0601: YVVAEHQALL SASKCSFVSS LFPLLSEDAS KSSKFSSIGS RFKQQLQSLL ETLSATEPHY IRCVKPNNLL KPAIFENHNV LQQLRCGGVM EAIRISCAGY
0701: PTRRTFYEFV DRFGILAPEV LDGSFDEVTA AKRLLEKAYL KGYQIGKTKV FLRAGQMAEL DARRNEVLGR SASTIQRKVR SFLARRTFIL LRKSAIQIQT
0801: ICRGQLARQV YEGMRRLAAA LRIQTYFRMH LARTAYRELF SSAVTIQTSV RGMAARKELH FRRQTRAAII IQSHCRRYLA CLNYSRIKKA VIATQCAWRA
0901: RVARRELRKL KQAARETGAL QAAKNKLEKQ VEELTWRLQL EKRMRKIGFH LSSLLVFRIG NYLAVLEAWV ANAEESDMTK YKFLFSLPKS PTKITRKTKD
1001: LVNCGNKYMF HNPSSLVDVF HCVIDSLSSF WFSLLMTSDT KKYIWNVFEG NLLVSADVEE TKTQENAKLQ AALQEMQQQF KETKSLLVKE REAAKKATEV
1101: VPIIKEVPVI DTALMDKLKD ENDKLKALVS SLEKKIDETE KKYEETSRIS EERLKKATDA ESKIIHLNNS MQRFLQFFSW LQGKMSNMES ENQILRQQSL
1201: MHSPVKRMSE HLSIPTTPTK QAVISLENGH HDVEELKVEP QSAPPAIKDY ADTDAKLKRS YMERQQENVD ALISCVSRNV GFSQGKPVAA LTIYKCLINW
1301: KSFEAERTSV FDCLIQMIGS AIENEESNDH LAYWLSNASS LLFLLQKSLK AAGTVGANPR RKPPAPTSLF GRMTQSFRSS PSSSNLAADG LDVVRQVEAK
1401: YPALLFKQQL TAYVEKIYGI IRDNVKKDLS SLLSLCIQAP RTTRATMLRG SGRSFGSQGQ SNHWKTIIES LDDVLKTLQE NYVPPVLIQK ICMQIFSFIN
1501: VQLFNSLLLR RECCSFSNGE YVKAGLAELE LWCAKAKPEY AGSSWDELKH IRQAVGFLVI FQKSRISYDE IVNDLCPALS VQQLYRICTQ YWDDKYNTKS
1601: VSSTVLSSMR ILMTEDSNNA ESSSFLLDDS SSIPFSVDDL SSSLQAKDFS GVKSAEELLG NPAFQFLQE

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.