Factsheet for HORVU6Hr1G091010.24

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G04600.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G377100.1	Wheat	cytosol	98.54	98.61
TraesCS6A01G390800.2	Wheat	cytosol	98.54	98.61
TraesCS6B01G431400.1	Wheat	cytosol	98.48	98.54
OQU85951	Sorghum	cytosol	91.79	91.19
Os02t0816900-01	Rice	cytosol, plasma membrane	76.37	90.94
Zm00001d018481_P033	Maize	cytosol	90.6	89.54
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	76.04	75.69
PGSC0003DMT400056647	Potato	cytosol	75.78	75.63
Solyc09g064200.2.1	Tomato	plastid	75.71	75.56
KRH32270	Soybean	cytosol	74.78	74.64
KRH19659	Soybean	cytosol	74.78	74.39
KRH67505	Soybean	cytosol	73.73	73.68
KRG95788	Soybean	cytosol	73.86	73.57
GSMUA_AchrUn_...	Banana	cytosol	74.85	73.44
Solyc06g008090.2.1	Tomato	cytosol	71.61	72.91
GSMUA_Achr3P27420_001	Banana	cytosol	80.48	72.86
VIT_00s0268g00030.t01	Wine grape	cytosol	21.38	72.58
VIT_05s0051g00050.t01	Wine grape	cytosol	70.95	72.04
CDY32922	Canola	cytosol	71.74	71.93
AT1G04160.1	Thale cress	cytosol	71.28	71.8
Bra027512.1-P	Field mustard	cytosol	58.24	71.54
CDY64313	Canola	cytosol	71.67	71.2
CDX94736	Canola	cytosol	71.87	71.07
Bra032526.1-P	Field mustard	cytosol	70.48	70.81
CDY10075	Canola	endoplasmic reticulum	70.68	70.5
CDY32531	Canola	endoplasmic reticulum	70.42	70.42
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	71.74	70.39
Bra011053.1-P	Field mustard	cytosol	69.62	69.85
AT5G43900.3	Thale cress	cytosol	71.54	69.07
AT4G28710.1	Thale cress	cytosol	68.5	68.27
PGSC0003DMT400038143	Potato	cytosol	38.39	68.08
HORVU1Hr1G044020.1	Barley	cytosol	67.64	67.73
Bra033704.1-P	Field mustard	cytosol, plastid	71.67	65.32
Bra036688.1-P	Field mustard	cytosol	61.55	64.36
HORVU5Hr1G125430.15	Barley	cytosol	62.54	64.2
AT2G20290.1	Thale cress	endoplasmic reticulum	63.27	64.03
CDY39766	Canola	cytosol	61.88	63.61
CDY03315	Canola	cytosol	61.81	63.49
VIT_16s0115g00220.t01	Wine grape	cytosol	11.12	62.92
HORVU3Hr1G050290.1	Barley	cytosol	63.14	62.39
Bra036460.1-P	Field mustard	cytosol	61.42	62.37
Solyc09g091080.2.1	Tomato	cytosol	66.91	62.18
HORVU7Hr1G038500.56	Barley	cytosol	63.87	61.78
KRG89126	Soybean	cytosol	63.67	60.85
CDY31978	Canola	cytosol	61.28	60.21
CDY05734	Canola	cytosol	61.42	58.81
HORVU5Hr1G094780.46	Barley	cytosol	59.63	57.87
KRH40872	Soybean	cytosol	63.53	57.52
AT1G04600.1	Thale cress	cytosol	64.66	56.47
CDY65572	Canola	plastid	69.62	55.34
CDY35211	Canola	plastid	69.62	55.19
CDX86626	Canola	cytosol	63.6	54.98
CDY15512	Canola	cytosol	63.53	54.7
Bra030576.1-P	Field mustard	cytosol	61.09	54.58
VIT_04s0079g00370.t01	Wine grape	cytosol	14.82	54.5
CDX79520	Canola	endoplasmic reticulum	54.47	54.43
CDY19473	Canola	cytosol	62.94	54.31
AT2G33240.1	Thale cress	cytosol	63.6	54.29
CDX84695	Canola	cytosol	61.95	53.98
CDY17154	Canola	cytosol	62.87	51.97
HORVU6Hr1G081340.4	Barley	cytosol	52.15	51.84
HORVU1Hr1G080240.9	Barley	cytosol	52.95	37.26
HORVU3Hr1G011330.5	Barley	cytosol	18.13	35.82
HORVU1Hr1G043440.4	Barley	cytosol	25.61	34.28
HORVU3Hr1G067400.2	Barley	cytosol	32.1	25.84

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.1
Gene3D:3.30.70.3240	Gene3D:3.40.850.10	UniProt:A0A287V5T6	ncoils:Coil	InterPro:Dilute_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007015	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	EnsemblPlantsGene:HORVU6Hr1G091010	EnsemblPlants:HORVU6Hr1G091010.24	InterPro:IPR000048
InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF256
SMART:SM00015	SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI000B48578D	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:574032599..574044925

Molecular Weight (calculated)

171434.0 Da

IEP (calculated)

7.657

GRAVY (calculated)

-0.429

Length

1511 amino acids

Sequence
(BLAST)

0001: MQAAQASIAV GSQVWVEDPD EAWLDGEVVK VNGDTITVKC SNEKTVTAKA SHVHAKDPEE SPCGVDDMTK LAYLHEPGVL QNLKSRYDMN EIYTYTGSIL
0101: IAVNPFRRLP HLYDIQMMEQ YKGAEFGELS PHPFAVADVA YRLMLNEGIS QSILVSGESG AGKTESTKMI MRYLAYMGGK AASEGRTVEK QVLQSNPVLE
0201: AFGNAKTVRN NNSSRFGKFV EIQFDQKGRI SGAAVRTYLL ERSRVCQISE SERNYHCFYM ICAGSPEERE KYKLGDPSTF HYLNQSGCYK IDGLDESKEY
0301: HETRKAMDII GISSEEQEGI FRIVAAILHL GNVEFAEGDD VDSSKPKNEK SMFHLRTAAE LFMCDEKALE DSLCKRIIVT RDENIVKTLD AEAAKGSRDA
0401: LAKTVYSRLF DWLVTKINNS IGQDPTSKCL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYTKEEI DWSYIEFVDN QDILDLIDKK
0501: PGGIIALLDE ACMLPRSTHE TFAQKLYQSF KNHKRFVKPK LSRSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLGA SGCPFVSGLF PLLSDDSSKS
0601: SKFSSIGSRF KQQLQSLLET LSSTEPHYIR CVKPNSLLKP AIFENQNVLQ QLRCGGVMEA IRISCAGYPT RRTFLEFIDR FGILAPDVLT GSSDEITAVR
0701: RLLEKVDLQG YQVGKTKVFL RAGQMAELDA RRNEVLGRSA NMIQRKVRSF LAKKSFIALR RSAVQIQTVC RGELARRVYQ SLRREAASLK IQTRYRMHNA
0801: RKAYTELSAS ALTIQSSLRG MAARKEIHFR RQTRAAIIIQ SRCRQFLARL DYSRTRKAAI TTQCIWRGKV ARKELRKLKL AARETGALQA AKNKLEKQVE
0901: ELTWRLQLEK RMRADLEESK SQENAKLQAA LQEVQQQYKE TKDTLVKERE ESKKVAEIAP VIKEVPVIDT ELMNKLRDEN DKLKTLVSSL EKKIDDTEKK
1001: YDETNKISEE RLKKAMDAES KIDDLNMAML RLQEKISNME SDEKVQRQAL LSTPVRSMSE HLSIPIVPKN LENGYHEAEE PKEPQSAPPA LKDYGNGDPK
1101: LRKSSAEKQQ ENVDALIDCV AKNLGYCEGK PVAAFTIYKC LLHWKSFEAE KTSVFDRLIQ LIGSAIENEE DNDNLAYWLS NTSSLLFLLQ RSLKAAGAPG
1201: GVSRKKPPQP TSLFGRMAQG LRSASFANMH VEATDVVRQV EAKYPALLFK QQLTAYVEKI YGIIRDNIKK ELSSLISLCI QAPRTMKASM LRISGRSSGQ
1301: TQSNHWQKII ENLDILLKIL QDNHVPPVLA QKIFTQIFSY INVQLFNSLL LRRECCSFSN GEYVKAGLAE LELWCAKATS EYAASSWDEI RHIRQAVGFL
1401: VIFQKFRISY DEIVHDLCPI LSVQQLYRIC TQYWDDKYNT QSVSSDVLSN MRVLMTEDSN NAESSSFLLD DNSSIPFSVE DITNAIHEKD FSDVKPAEEL
1501: LENPAFQFLQ D

Best Arabidopsis Sequence Match ( AT1G04160.1 )
(BLAST)

0001: MVATFNPAVG SHVWVEDPDE AWLDGEVVEI NGDQIKVLCA SGKQVVVKDS NIYPKDVEAP ASGVEDMTRL AYLHEPGVLQ NLQSRYDINE IYTYTGSILI
0101: AVNPFRRLPH LYSSHMMTQY KGASLGELSP HPFAVADAAY RQMVNEGVSQ SILVSGESGA GKTESTKLLM RYLAFMGGRG AATEGRTVEQ KVLESNPVLE
0201: AFGNAKTVKN NNSSRFGKFV EIQFDQSGRI SGAAIRTYLL ERSRVCQVSD PERNYHCFYM LCAAPEEDAK KFKLGDPKIY HYLNQSKCIQ LDAMNDAEEY
0301: HATKKAMDVV GISSEEQDAI FRVVASILHL GNIEFAKGTE IDSSIPRDEK SWFHLKTAAE LLMCNEKSLE DSLCKRIMAT RDETITKTLD PEAALLSRDA
0401: LAKVMYSRLF DWLVEKINTS IGQDPDSKYL IGVLDIYGFE SFKTNSFEQF CINLTNEKLQ QHFNQHVFKM EQEEYKKEEI NWSYIEFVDN QDILDLIEKK
0501: PGGIIALLDE ACMFPRSTHE TFAQKLYQTY KNHKRFTKPK LARSDFTICH YAGDVTYQTE LFLDKNKDYV IAEHQALLNA STCSFVANLF PPVSDDSKQS
0601: KFSSIGTRFK QQLVSLLEIL NTTEPHYIRC IKPNNLLKPG IFENQNVLQQ LRCGGVMEAI RISCAGYPTR KHFDEFLNRF GIIAPQVLDK NSNEPAACKK
0701: LLDKAGLEGY QIGKSKVFLR AGQMADLDTR RTEILGRSAS IIQRKVRSYL AQKTFIQLRI SATQIQAVCR GYLARSIYEG MRREAAALKI QRDLRKFLAR
0801: KAYTELFSAT ILIQAGMRGM VSRKELCLRR QTKAATIIQT RCRVYLARLH YRKLKKAAIT TQCAWRGKVA RKELKNLKMA ARETGALQEA KNKLEKQVEE
0901: LTWRLQLEKR MRTDLEEAKK QENAKYESSL EEIQNKFKET EALLIKEREA AKTVSEVLPI IKEVPVVDQE LMEKLTNENE KLKGMVSSLE IKIDETAKEL
1001: HETARISQDR LKQALAAESK VAKLKTAMQR LEEKISDMET EKQIMLQQTI LNTPVKSVAG HPPTATIKNL ENGHRTNLEN QFNEVEVNGN AGKSAAERQL
1101: ENVDTLIDCV KENIGFSNGK PIAAFTIYKC LLHWKCFESE KTSAFDRLIE MIGSAIENED DNGHLAYWLT NTSALLFLLQ KSLKPAGAGA TASKKPPITT
1201: SLFGRMALSF RSSPNLAAAA EAAALAVIRP VEAKYPALLF KQQLAAYVEK IFGMIRDNLK KELSALISMC IQAPRISKGG IQRSARSLGK DSPAIHWQSI
1301: IDGLNSLLAI LKDNYVPLVL IQKIHTQTFS FVNVQLFNSL LLRKECCTFS NGEFVKSGLA ELELWCGQVN EYAGPSWDEL KHIRQAVGFL VIHQKYRVSY
1401: DDIVHDLCPI LSVQQLYRIC TLYWDDCYNT RSVSQEVISS MRALMTEESN DADSNSFLLD DNSSIPFSID EISNSMHEKD FASVKPAKEL LENPEFVFLH

Arabidopsis Description

XI-BMyosin-8 [Source:UniProtKB/Swiss-Prot;Acc:F4I460]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.