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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036460.1-P Field mustard cytosol 95.19 98.39
CDY05734 Canola cytosol 94.08 91.7
CDY39766 Canola cytosol 83.62 87.48
CDY03315 Canola cytosol 83.48 87.29
CDY71471 Canola cytosol 25.94 82.27
AT2G20290.1 Thale cress endoplasmic reticulum 79.06 81.45
CDX91798 Canola cytosol 22.17 67.66
PGSC0003DMT400056647 Potato cytosol 64.3 65.32
KRH32270 Soybean cytosol 64.24 65.26
Solyc09g064200.2.1 Tomato plastid 64.24 65.26
KRH19659 Soybean cytosol 64.37 65.17
VIT_07s0005g04790.t01 Wine grape cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 64.11 64.95
KRH67505 Soybean cytosol 63.59 64.68
KRG95788 Soybean cytosol 63.78 64.67
CDY32922 Canola cytosol 63.33 64.63
CDY72648 Canola cytosol 11.38 64.34
Solyc06g008090.2.1 Tomato cytosol 61.83 64.08
CDX94736 Canola cytosol 63.52 63.94
CDY64313 Canola cytosol 63.07 63.77
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 63.52 63.44
Os03t0860700-00 Rice cytosol, plasma membrane 36.48 63.1
CDY32531 Canola endoplasmic reticulum 61.83 62.94
CDY10075 Canola endoplasmic reticulum 61.96 62.9
OQU85951 Sorghum cytosol 60.99 61.67
TraesCS6A01G390800.2 Wheat cytosol 60.4 61.52
TraesCS6B01G431400.1 Wheat cytosol 60.4 61.52
TraesCS6D01G377100.1 Wheat cytosol 60.34 61.46
HORVU6Hr1G091010.24 Barley cytosol 60.21 61.28
Zm00001d018481_P033 Maize cytosol 60.86 61.22
Os02t0816900-01 Rice cytosol, plasma membrane 50.33 60.99
CDX68955 Canola cytosol 20.48 60.58
GSMUA_AchrUn_... Banana cytosol 58.71 58.64
KXG34975 Sorghum cytosol 54.88 58.53
EER90459 Sorghum cytosol 55.85 57.88
TraesCS1D01G174000.2 Wheat cytosol 56.76 57.85
Zm00001d019495_P001 Maize cytosol 56.63 57.84
Zm00001d034927_P001 Maize cytosol 56.11 57.76
TraesCS1A01G166900.2 Wheat cytosol 56.44 57.48
HORVU1Hr1G044020.1 Barley cytosol 56.37 57.46
TraesCS1B01G183200.1 Wheat cytosol 56.24 57.28
GSMUA_Achr3P27420_001 Banana cytosol 62.09 57.22
TraesCS5D01G558600.1 Wheat cytosol 55.07 56.92
HORVU5Hr1G125430.15 Barley cytosol 54.42 56.86
TraesCS5B01G566200.1 Wheat cytosol 54.75 56.62
TraesCS4A01G313500.1 Wheat cytosol 54.68 56.56
PGSC0003DMT400038143 Potato cytosol 31.08 56.1
CDY65572 Canola plastid 67.69 54.76
CDY42350 Canola cytosol 53.38 54.62
CDX95235 Canola cytosol 54.55 54.62
CDY35211 Canola plastid 67.62 54.56
CDX81833 Canola cytosol 51.76 54.33
CDY31130 Canola cytosol, mitochondrion 54.03 53.96
CDY66597 Canola cytosol 53.38 53.94
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.99 53.76
CDX70927 Canola cytosol 54.03 53.41
CDY45087 Canola cytosol 53.51 53.13
CDY51846 Canola cytosol 54.1 52.62
CDX84752 Canola cytosol 51.82 51.06
CDX79446 Canola cytosol 51.56 50.93
CDX88973 Canola cytosol 38.1 49.87
CDY15512 Canola cytosol 56.57 49.57
CDX86626 Canola cytosol 56.31 49.54
CDX79520 Canola endoplasmic reticulum 48.44 49.27
CDY00546 Canola cytosol 37.97 48.63
CDX84695 Canola cytosol 54.81 48.62
CDY19473 Canola cytosol 55.33 48.6
CDX67724 Canola cytosol 37.84 47.51
CDX98274 Canola nucleus 37.97 47.02
CDY46128 Canola cytosol 45.9 47.0
GSMUA_Achr1P03340_001 Banana cytosol 56.44 46.72
CDX72393 Canola cytosol 45.71 46.68
CDX93542 Canola cytosol 52.47 46.62
CDY17154 Canola cytosol 55.2 46.44
CDX95038 Canola cytosol 50.65 46.04
CDX75338 Canola cytosol 45.58 42.31
CDY69448 Canola extracellular, golgi, mitochondrion 8.13 37.88
CDX92461 Canola cytosol 10.79 35.85
CDY16536 Canola cytosol 10.34 35.41
CDY69853 Canola endoplasmic reticulum 10.4 33.13
CDY24591 Canola cytosol, plastid 24.9 33.05
CDY36068 Canola cytosol, mitochondrion 24.32 33.01
CDY42506 Canola cytosol, plastid 24.25 32.46
CDY22791 Canola cytosol, plastid 24.32 32.33
CDY65579 Canola endoplasmic reticulum 23.67 32.24
CDY29324 Canola cytosol 24.06 32.23
CDX82270 Canola cytosol 24.64 31.69
CDY52239 Canola cytosol 24.38 31.33
CDY18321 Canola cytosol 24.51 31.23
CDY28777 Canola cytosol 24.32 31.19
CDY53932 Canola cytosol, plastid 23.93 31.16
CDY14319 Canola cytosol, plastid 24.19 30.87
CDY25361 Canola cytosol 25.1 24.92
CDX72394 Canola nucleus 0.26 0.4
Protein Annotations
Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530Gene3D:2.30.30.360MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078H538UniProt:A0A078H538EnsemblPlants:CDY31978ProteinID:CDY31978ProteinID:CDY31978.1
ncoils:CoilInterPro:Dilute_domGO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777
GO:GO:0003779GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007015GO:GO:0007018GO:GO:0008017
GO:GO:0008150GO:GO:0009987GO:GO:0016043GO:GO:0016459GO:GO:0016787GO:GO:0051015
EnsemblPlantsGene:GSBRNA2T00050774001InterPro:IPR000048InterPro:IPR001609InterPro:IPR002710InterPro:IPR004009InterPro:IPR008989
InterPro:IPR036961InterPro:IQ_motif_EF-hand-BSInterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:MyosinXI_CBDInterPro:Myosin_N
InterPro:Myosin_S1_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063PFAM:PF00612PFAM:PF01843
PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51126PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF256SMART:SM00015SMART:SM00242SMART:SM01132SUPFAM:SSF52540
UniParc:UPI0004EE1043SEG:seg::::
Description
BnaA07g00170DBnaA07g00170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H538]
Coordinates
chrLK032283:+:274166..289783
Molecular Weight (calculated)
174557.0 Da
IEP (calculated)
6.582
GRAVY (calculated)
-0.360
Length
1538 amino acids
Sequence
(BLAST)
0001: MLSCSAASCP SPTHGRYDCY DRAAGLTGTR EPSQWSAVSD VFKVLSFVDF IASSTVKVGS FVWVEDPEEA WLDGEVTEVN GVDIKVRCTS GKTVVVKVSN
0101: TYPKDMEVPP SGVADMTTLA YLHEPGVLQN LKSRYHLDDI YTYTGDILIA VNPFKQLENL YNDHMIALYK GAPFGSLMPH PFAVADAAYR QMINEGVSQS
0201: ILVSGESGAG KTETAKTLMK YLAKMGGRAV NDLSNRRSVE DQVLESNPVL EAFGNAKTVR NNNSSRFGKF VEIQFDQRGR ISGAAIKTYL LERSRVCQVS
0301: DYERNYHCFY MLCAAPPEDT RKLKLEDPTK YRYLNQSRCI KLEGMDDSKE YTKTREAMSI VGISLEEQEA IFRILGAILH LGNIEFTNGE ETDSSVPKDK
0401: KSLKIAAELF MCDEQALEDS LCKRVMVTPE ETLSRCLDPE SAAFSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKNMIG VLDIYGFESF KTNSFEQFCI
0501: NLTNEKLQFH FNEHVLKMEQ DEYKKEEIEW NHIEFPDNRY VLELIEKKPG GIIALLDEAC MFPRSTHETF SQKMYETFKK NEYFRKPKLA RTDFTVCHYA
0601: GDVTYQTEQF LEKNKDYVVA EHQALLGSSR CTFIAGLFPL QMEDASKQSK FSSVASQFKQ QLALLIERLS TTEPRYIRCV KPNNLLKRSI FENQNVLQQL
0701: RCGGMMEAIE ICRAGYPTRK LFDEFLDRFS ILAASLTLDK RLVPTSYDEK EACKKLLEAV GLEGYQIGKT KVLLMAGQMA ELDARRTEVL GRAARIIQWK
0801: FRSYLLIKAA INMQAVCRGH LARHRFEDMR RKEAAALKIQ RALRIYLERR TYIEAVVTVQ SCLRGMSARN ALRKKTKATL VIQINCRRFL AETHYKKLKK
0901: AAVTTQSAWR ARLARKELRE LKMAAKETGA LQAAKSKLEE QVEDLKLTLE LEKRLRVDVE ESKTQENAKL QLALQEIQDQ FKETKVSLLK EVEAAKKTAE
1001: MVTVVKEVPI VDTELVEKLK SENENLKSMV TSLEQKIDET EKKFKETTKI SEERLKQVLE AESKALEAES KIVDLKTAMD KLQKMLEDVK NENQVLKQSV
1101: SSTPVETASG HFPSTPVKNL QNVHNPSEEN ASLQGTMFTT PAKIQEPRGS RFDPRHEDVD ALINCVTKSV GFSQGKPVAA FTIYRCLLHW KSFEAERTNL
1201: FDRLVQMIGS AIKNEEEDNA SLAYWLSNTS TLLFMLQQSL KSGGTGDNTP LRNSPSLVWW MTKGFRSPAA EAIRPVDAKV PALHFKQQLA AYVENIIGII
1301: WDNLKTELNT FLTLCIQAPV THKGNALISD STAKHWEGIT EALDALLSTL KDNFVPPVLI QTIFSQAFSL INVQLFNSLV TRRDNCSFIN GEYAKYGLDK
1401: LEKWCSETNE EYAGSSWDVL KHTRQAVGFL LIHKKDRISY EDIANDLCPI LSIQQHFRLC TLYKDEIYNT ESVDQEVIES MEKVMILIDV SDFLLKDDSS
1501: NSMSMLIDDL SSSMQDKDFS QVKPAEELVE NPSFVFLQ
Best Arabidopsis Sequence Match ( AT2G20290.1 )
(BLAST)
0001: MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE
0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ
0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL
0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN
0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY
0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP
0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS
0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ
0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA
0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE
1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES
1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS
1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL
1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI
1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH
Arabidopsis Description
XI-GMyosin-13 [Source:UniProtKB/Swiss-Prot;Acc:F4IUG9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.