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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 2
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY72648 Canola cytosol 43.45 80.51
GSMUA_Achr7P26040_001 Banana cytosol 77.38 73.31
CDX68955 Canola cytosol 64.29 62.31
CDX88973 Canola cytosol 71.03 30.47
CDY31130 Canola cytosol, mitochondrion 91.87 30.06
CDY00546 Canola cytosol 71.23 29.89
CDX95235 Canola cytosol 89.88 29.49
CDX67724 Canola cytosol 71.63 29.47
AT1G08730.1 Thale cress endoplasmic reticulum 89.29 29.26
CDX98274 Canola nucleus 71.43 28.99
CDY42350 Canola cytosol 85.32 28.61
OQU76115 Sorghum cytosol 83.73 28.49
Os06t0488200-01 Rice cytosol, plasma membrane 84.72 27.93
KRG92711 Soybean cytosol 84.92 27.92
Solyc11g006220.1.1 Tomato cytosol, extracellular 84.13 27.79
KRH34117 Soybean cytosol 83.93 27.61
Zm00001d044819_P002 Maize cytosol 83.33 27.47
VIT_14s0081g00160.t01 Wine grape cytosol 82.94 27.45
Bra030739.1-P Field mustard cytosol 84.52 27.43
TraesCS7D01G190300.1 Wheat cytosol 82.74 27.25
TraesCS7B01G094100.1 Wheat cytosol 82.74 27.22
KRH68770 Soybean cytosol 81.15 27.0
HORVU7Hr1G038500.56 Barley cytosol 82.54 26.63
CDX81833 Canola cytosol 75.6 26.01
CDX93542 Canola cytosol 89.29 26.0
CDY66597 Canola cytosol 77.98 25.82
CDX70927 Canola cytosol 78.97 25.58
CDX95038 Canola cytosol 85.71 25.53
CDY45087 Canola cytosol 78.37 25.5
CDY51846 Canola cytosol 78.97 25.17
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 75.2 25.0
GSMUA_Achr4P14090_001 Banana cytosol 76.39 24.77
CDY32922 Canola cytosol 73.81 24.68
CDY64313 Canola cytosol 73.81 24.46
CDY32531 Canola endoplasmic reticulum 72.62 24.22
CDY10075 Canola endoplasmic reticulum 72.42 24.09
CDX94736 Canola cytosol 72.82 24.02
CDX79520 Canola endoplasmic reticulum 71.43 23.81
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 72.62 23.77
CDX79446 Canola cytosol 73.02 23.64
CDX84752 Canola cytosol 73.02 23.57
CDY39766 Canola cytosol 68.25 23.4
CDY03315 Canola cytosol 68.06 23.32
CDY31978 Canola cytosol 67.66 22.17
CDY05734 Canola cytosol 67.66 21.61
CDY46128 Canola cytosol 63.89 21.44
CDX72393 Canola cytosol 63.89 21.38
CDX86626 Canola cytosol 72.82 21.0
CDY15512 Canola cytosol 73.02 20.97
CDX84695 Canola cytosol 72.02 20.93
GSMUA_Achr4P07150_001 Banana cytosol, mitochondrion, nucleus, plastid 81.94 20.6
CDY19473 Canola cytosol 71.03 20.45
CDX75338 Canola cytosol 65.08 19.79
CDY17154 Canola cytosol 71.03 19.58
CDY65572 Canola plastid 72.42 19.2
CDY35211 Canola plastid 72.42 19.15
CDY42506 Canola cytosol, plastid 43.45 19.06
CDY29324 Canola cytosol 43.25 18.99
CDY22791 Canola cytosol, plastid 43.45 18.93
CDY36068 Canola cytosol, mitochondrion 42.46 18.89
CDY24591 Canola cytosol, plastid 43.25 18.81
CDY53932 Canola cytosol, plastid 43.25 18.46
CDX82270 Canola cytosol 42.86 18.06
CDY28777 Canola cytosol 42.06 17.68
CDY52239 Canola cytosol 41.87 17.63
CDY18321 Canola cytosol 41.47 17.32
CDY14319 Canola cytosol, plastid 41.27 17.26
CDY25361 Canola cytosol 43.25 14.07
CDY65579 Canola endoplasmic reticulum 3.77 1.68
CDY69853 Canola endoplasmic reticulum 1.19 1.24
CDX92461 Canola cytosol 0.99 1.08
GSMUA_Achr7P26030_001 Banana cytosol 1.59 0.67
CDY16536 Canola cytosol 0.6 0.67
CDY71471 Canola cytosol 0.6 0.62
CDY69448 Canola extracellular, golgi, mitochondrion 0.4 0.61
CDX72394 Canola nucleus 0.79 0.4
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.58.530Gene3D:3.40.850.10MapMan:35.1GO:A0A078DX42
EnsemblPlants:CDX91798ProteinID:CDX91798ProteinID:CDX91798.1GO:GO:0000166GO:GO:0003674GO:GO:0003774
GO:GO:0003777GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005856GO:GO:0007018GO:GO:0008017GO:GO:0008150
GO:GO:0009987GO:GO:0016459GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00153385001InterPro:IPR001609InterPro:IPR004009
InterPro:IPR036961InterPro:Kinesin_motor_dom_sfInterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF02736PRINTS:PR00193PFscan:PS51456PFscan:PS51844PANTHER:PTHR13140PANTHER:PTHR13140:SF510
SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EF117B:::
Description
BnaC08g07170D
Coordinates
chrLK031869:-:1524179..1527637
Molecular Weight (calculated)
57261.6 Da
IEP (calculated)
6.455
GRAVY (calculated)
-0.293
Length
504 amino acids
Sequence
(BLAST)
001: MVRERLTFLY CDVFGKLQGT PVNIIVGSHV WVEDSDVAWI DGEVEKLTGE VITAKLSKIY PKNVEAPAGG VDDMRKLSYL HEPGVLQNLK IRYELNEIYT
101: YTGNILIAIN PFQRLPHIYD AHMMQQYKGA PFGELNPHVF AVADVAYRAM INEGKSNSIL VSGESGAGKT ETTKMLMRYL AYLGGRAVTE GRTVEQQVLE
201: SNPVLEAFGN AKTVRNNNSS RFGKFVEIQF DKQGRISGAA IRTYLLERSR VCQISDPERN YHCFYLLCAA PQEEIEKYKL GHPKTFHYLN QSKCYELVGI
301: SDAHDYLATR RAMDIVGISE NEQEAIFRVV AAILHIGNVE FTKGKEVDSS VPKDDKAKFH LKTAAELLMC DLKALEDALC KLVMVRPEEV IKRSLDPESA
401: VTSRDGLAKT VYSRLFDWLV NKINNSIGQD ANSKCLIGVL DIYGFESFKT NSFEQFCINF TNEKLQQHFN QHVFKMEQEE YTKEAIDWSY IEFVDNKLKL
501: TWKS
Best Arabidopsis Sequence Match ( AT1G08730.1 )
(BLAST)
0001: MVRECFTFLN IFVLHSIGSH VWFEDPEVAW IDGEVEKING QEVVIQATTG KKVTAKLSKI YPKDVEAPAG GVDDMTKLSY LHEPGVLQNL KIRYELNEIY
0101: TYTGNILIAI NPFQRLPHIY DAHMMQQYKG APLGELSPHV FAVADVAYRA MINEGKSNSI LVSGESGAGK TETTKMLMRY LAYLGGRAVT EGRTVEQQVL
0201: ESNPVLEAFG NAKTVRNNNS SRFGKFVEIQ FDKQGRISGA AIRTYLLERS RVCQISDPER NYHCFYLLCA APQEEIEKYK LGHPKTFHYL NQSKCFELVG
0301: ISDAHDYLAT RRAMDIVGIS EKEQEAIFRV VAAILHIGNI DFTKGKEVDS SVPKDEKSKF HLKTAAELLM CDLKALEDAL CKRVMITPEE VIKRSLDPQS
0401: AVTSRDGLAK TVYSRLFDWL VDKINKSIGQ DANSRSLIGV LDIYGFESFK TNSFEQFCIN FTNEKLQQHF NQHVFKMEQE EYTKEAIDWS YIEFVDNQDV
0501: LDLIEKKPGG IVALLDEACM FPKSTHETFA NKLYQTFKTH KRFIKPKLSR TDFAVAHYAG EVLYQSELFL DKNKDYVIPE HQDLLGASKC PFVVGLFPPL
0601: PEETSKSSKF SSIGSRFKLQ LQQLMETLNC TEPHYIRCVK PNNLLKPAIF ENVNIMQQLR CGGVLEAIRI SCAGYPTRKP FFEFINRFGL LSPAALEGNF
0701: DEKVACQKIL DNMGLKGYQI GKTKVFLRAG QMAELDARRA EVLSSAAKKI QRRIRTHQAQ KRFIVLRKAT ISLQAICRGR LSCKHYDNLR REAAAVKIQK
0801: NGRRHYSRKS YKKLHVASLV VQTGLRAMAA RKQFRFRKQT KAATIVQAQW RCHRAISYYK KLKNGVVLSQ TRWRGRLAKR ELRKLKMAAR ETGALKEAKD
0901: MLEKKVEELT YRVQLEKRSR GDLEEAKTQE ILKLKSSFEE MRKKVDETNA LLLKEREAAK KAAEEAPPVI KETQILVEDT KKIELMTEEL ESVKVTLENE
1001: KQRADDAVRK FEEAQESLED KKKKLEETEK KGQQLQESLT RMEEKCSNLE SENKVLRQQA VSMAPNKFLS GRSRSILQRG SESGHLAVDA RSNLDLHSHS
1101: INHRDPSEVE DKPQKSLNEK QQENQDLLIR SIVQHLGFQG NRPITACIIY KCLLQWRSFE VERTSVFDRI IQTIGHAIET QDNNNTLAYW LSNTSTLLLL
1201: LQRTLKASGA AGMAPQRRRS SSATLFGRMS QSFRGAPPGV NLAMINGAAG GGADTFRQVE AKYPALLFKQ QLTAYVEKIY GMIRDNLKKE ISPLLGLCIQ
1301: APRTSRASLV KGASRSVGNT AAQQALIAHW QGIVKSLTNF LNTLKSNNVP SFLVRKVFTQ IFSFINVQLF NSLLLRRECC SFSNGEYVKA GLSELEHWCF
1401: KATNEYAGSS WDELKHIRQA IGFLVVHQKP KKTLDEISHD LCPVLSIQQL YRISTMYWDD KYGTHSVSPD VIANMRVLMT EDSNNAVSNS FLLDDDSSIP
1501: FSVDDLSKSM EKFEIADIEP PPLIRENSGF SFLLPVSE
Arabidopsis Description
XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.