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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88973 Canola cytosol 94.34 96.43
AT3G58160.1 Thale cress cytosol 87.34 84.46
CDX67724 Canola cytosol 84.93 83.27
CDX98274 Canola nucleus 85.1 82.29
CDX91798 Canola cytosol 29.89 71.23
GSMUA_Achr7P26040_001 Banana cytosol 31.06 70.11
CDY72648 Canola cytosol 15.74 69.49
KRH32145 Soybean cytosol 54.54 64.53
KRH19523 Soybean cytosol 56.7 63.23
VIT_07s0005g02970.t01 Wine grape cytosol 59.53 62.55
CDX68955 Canola cytosol 26.48 61.15
Solyc06g083960.1.1 Tomato cytosol 56.95 60.05
OQU76115 Sorghum cytosol 58.53 47.47
Os06t0488200-01 Rice cytosol, plasma membrane 59.45 46.7
Zm00001d044819_P002 Maize cytosol 59.37 46.63
CDX95235 Canola cytosol 57.95 45.31
TraesCS7D01G190300.1 Wheat cytosol 57.7 45.29
TraesCS7B01G094100.1 Wheat cytosol 57.62 45.17
CDY42350 Canola cytosol 56.45 45.11
CDX81833 Canola cytosol 54.7 44.85
HORVU7Hr1G038500.56 Barley cytosol 58.28 44.81
CDY66597 Canola cytosol 56.2 44.35
GSMUA_Achr4P14090_001 Banana cytosol 57.29 44.27
CDY31130 Canola cytosol, mitochondrion 56.54 44.09
CDY45087 Canola cytosol 56.2 43.58
CDX70927 Canola cytosol 56.29 43.44
CDY21744 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 54.79 43.4
CDY51846 Canola cytosol 56.37 42.82
CDY32922 Canola cytosol 52.37 41.74
CDY64313 Canola cytosol 52.37 41.35
CDY32531 Canola endoplasmic reticulum 51.71 41.1
CDX94736 Canola cytosol 52.21 41.03
CDY10075 Canola endoplasmic reticulum 51.71 40.99
CDY22325 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 52.37 40.84
CDX79446 Canola cytosol 52.54 40.53
CDX84752 Canola cytosol 52.54 40.42
CDY39766 Canola cytosol 48.21 39.39
CDY03315 Canola cytosol 48.04 39.23
CDX79520 Canola endoplasmic reticulum 49.38 39.22
CDX93542 Canola cytosol 55.29 38.36
CDX95038 Canola cytosol 53.87 38.24
CDY31978 Canola cytosol 48.63 37.97
CDY05734 Canola cytosol 48.63 37.01
GSMUA_Achr4P07150_001 Banana cytosol, mitochondrion, nucleus, plastid 60.12 36.01
CDX84695 Canola cytosol 51.71 35.81
CDX86626 Canola cytosol 51.12 35.13
CDY15512 Canola cytosol 51.12 34.99
CDY19473 Canola cytosol 50.46 34.61
CDX72393 Canola cytosol 43.13 34.4
CDY46128 Canola cytosol 42.88 34.29
CDY17154 Canola cytosol 50.37 33.1
CDY65572 Canola plastid 51.37 32.46
CDY35211 Canola plastid 51.29 32.32
CDX75338 Canola cytosol 43.8 31.74
CDY42506 Canola cytosol, plastid 29.06 30.37
CDY22791 Canola cytosol, plastid 29.06 30.16
CDY36068 Canola cytosol, mitochondrion 28.39 30.1
CDY29324 Canola cytosol 28.73 30.05
CDY24591 Canola cytosol, plastid 28.89 29.94
CDX82270 Canola cytosol 29.06 29.18
CDY53932 Canola cytosol, plastid 28.39 28.87
CDY52239 Canola cytosol 27.89 27.99
CDY18321 Canola cytosol 28.06 27.92
CDY28777 Canola cytosol 27.73 27.77
CDY14319 Canola cytosol, plastid 27.81 27.72
GSMUA_Achr7P26030_001 Banana cytosol 27.23 27.39
CDY69853 Canola endoplasmic reticulum 9.58 23.81
CDY25361 Canola cytosol 28.81 22.34
PGSC0003DMT400028274 Potato cytosol 11.24 18.12
CDY65579 Canola endoplasmic reticulum 15.57 16.56
CDY71471 Canola cytosol 3.66 9.07
CDX92461 Canola cytosol 2.08 5.4
CDY16536 Canola cytosol 1.83 4.9
CDY69448 Canola extracellular, golgi, mitochondrion 1.25 4.55
CDX72394 Canola nucleus 0.08 0.1
Protein Annotations
Gene3D:1.10.10.820Gene3D:1.20.120.720Gene3D:1.20.5.190Gene3D:1.20.58.530MapMan:20.2.4.1Gene3D:3.30.70.3240
Gene3D:3.40.850.10GO:A0A078EHF7EnsemblPlants:CDY00546ProteinID:CDY00546ProteinID:CDY00546.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003774GO:GO:0003777GO:GO:0003824GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005856
GO:GO:0007018GO:GO:0008017GO:GO:0008150GO:GO:0009987GO:GO:0016459GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00110290001InterPro:IPR000048InterPro:IPR001609InterPro:IPR004009InterPro:IPR036961InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sfInterPro:MYSc_Myo11InterPro:Myosin_NInterPro:Myosin_head_motor_domInterPro:P-loop_NTPasePFAM:PF00063
PFAM:PF00612PFAM:PF02736PRINTS:PR00193PFscan:PS50096PFscan:PS51456PFscan:PS51844
PANTHER:PTHR13140PANTHER:PTHR13140:SF652SMART:SM00015SMART:SM00242SUPFAM:SSF52540UniParc:UPI0004EED0FA
SEG:seg:::::
Description
BnaC04g23790D
Coordinates
chrLK031920:+:166339..172659
Molecular Weight (calculated)
136860.0 Da
IEP (calculated)
5.771
GRAVY (calculated)
-0.578
Length
1201 amino acids
Sequence
(BLAST)
0001: MGENILVDSH VWVEDPEIAW THGVVLNIKG DEAEVKTNDG KELVAKLSKL YPKDDEAPSE GVEDMTRLSY LHEPAVLDNL ATRYGLNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE ASFKELGPHV FAIGGIAYRW EMINEDRNKC ILVSGESGSG KTETTKMLMR YLAYFGGHTA GEGRTVENQV LESNPVLEAF
0201: GNAKTVKNNN SSRFGKFVEI QFDDVGRISG AAIRTYLLER SRVCQVSDPE RNYHCFYLLC AAPPEDAERF KLGDPKSFRY LNQSSCYELD GVNDAEEYLA
0301: TRRAMDVVGI SETEQDAIFR IVAAILHLGN IEFCKGEDAD SSSLKDEQSM FHLQMTSELL MCDPNSLEDA LCKRMMVTPE EVIKRSLDPL GAAVSRDGLA
0401: KTIYSRLFDW LVNKINISIG QDSHSRRLIG VLDIYGFESF KTNSFEQFCI NYTNEKLQQH FNQHVFKMEQ GEYEKEEIDW SYVEFVDNKD VVDLIEKKPG
0501: GIIALLDEAC MLPKSTPETF SEKLYQTFKN HKRFIKPKLT RSDFTLVHYA GEVQYQSDQF LDKNKDYVVA EHQDLLNASK CSFVSGLFPP LPKASSKSKF
0601: SSIGARFKLQ LQQLMETLNL TEPHYIRCVK PNNLLQPTVF DNANVLHQLR SGGVLEAIRV KCAGYPTNRT FIEFLKRFII LAPEILKGEY EADDACKWIL
0701: DKKGLTGFQI GKSKVFLRAG QMAELDAHRT KVLGEAAKMI QGQVRTRLTR ERYVLLRRAS VNIQANWRAN LARKISRYMK REEAAIKIQK NLRRQIAIKD
0801: YGNTKSSAVT LQSGLRTMVA RHEFHYKLKS KAATVIQSYW RGYSAITDYK KLKRASLVYQ SKLRGRIARK QLGQSNQVFQ TIFKCFDLCR WLSSLEEDAD
0901: KKKETEHERE VELSNRAEEA VDKSFVKHSD ESGDEDMGHD RETTHSIQED DGTEKSFVMH SEHSDDGEIR HERETKHTTI QADDGIEKSF VMHSEHSSDE
1001: EKGHERHTEH TIQADDGIEN PFVLDSENLY NNFSDVSHIT NPFRDTEIES LTAEVEMLKA LLQVEKQRAD ISERKCDEAR ELGERRRKRL EETEKRVYQL
1101: QDSLNRLLYS MSDQFSQLKS ILRSTSMSST MAASAPVVRD DLADSSENSE ASSTDSDFTF PAPSSSSPDN PNQLQVIVQD LSTTEAKGTE IKKEGGFEDY
1201: F
Best Arabidopsis Sequence Match ( AT3G58160.1 )
(BLAST)
0001: MAENIMVDSH VWVEDPERAW IDGVVLNIKG EEAEIKTNDG RDVIANLSRL YPKDTEAPSE GVEDMTRLSY LHEPAVLDNL ATRYELNEIY TYTGNILIAV
0101: NPFQGLPHLY DAEVMEKYKE AYFKELNPHV FAIGGIAYRE MINEGRNKCI LVSGESGSGK TETTKMLMRY LAYFGGHTAV EGRTVENQVL ESNPVLEAFG
0201: NAKTVKNNNS SRFGKFVEIQ FDDVGRISGA AIRTYLLERS RVCQVSDPER NYHCFYLLCA APPEDVERFK LGDPKSFRYL NQSSCYKLDG VNDAEEYLAT
0301: RRAMDVVGIS EKEQDAIFRV VASILHLGNI EFSKGEDADS SSVKDEQSMF HLQMTSELLM CDPHSLEDAL CKRMMVTPEE VIKRSLDPLG AAVSRDGLAK
0401: TIYSRLFDWL VNKINISIGQ DSHSRRLIGV LDIYGFESFK TNSFEQFCIN YTNEKLQQHF NQHVFKMEQG EYQKEEIDWS YVEFVDNKDV VDLIEKKPGG
0501: IIALLDEACM LPKSTPETFS EKLYHTFKDH KRFMKPKLTR SDFTLVHYAG DVQYQSDQFL DKNKDYVVAE HQDLLNASKC SFVSGLFPPL PKESSKSKFS
0601: SIGARFKLQL QQLMETLNST EPHYIRCVKP NNLLQPTVFD NANVLHQLRS GGVLEAIRVK CAGYPTNRTF IEFLNRFLIL APEILKGEYE AEVACKWILE
0701: KKGLTGYQIG KSKVFLRAGQ MAELDAHRTR VLGESARMIQ GQVRTRLTRE RFVLMRRASV NIQANWRGNI ARKISKEMRR EEAAIKIQKN LRRQIAKKDY
0801: GKTKSSALTL QSGVRTMAAR HEFRYKLTTR AATVIQAYWR GYSAISDYKK LKRVSLLCKS NLRGRIARKQ LGQSKQADRK EETEKERKVE LSNRAEEAVD
0901: MSFVLHSEQS DDAESGHGRK AKLSIESEDG LDKSSVLHSE QSDDEELGHE RKTKLSIESE DGHSDQSDDE EIEHERKTKH CIQAEDGIEK SYVMHSDQSD
1001: DEEIGHKRKT KHSIQAEDGI EKSFVVHSDQ SDDEEIGHER KTKHAIQVED GIQKSFVTCS EKPYNTFSVV SQITSPIRDT EIESLTAEVE MLKALLQVEK
1101: QRADISERKC AEARELGERR RKRLEETERR VYQLQDSLNR LLYSMSDQFS QLKSILRSPS MSASTMASAP VVRDDLADSS ENSEASSSDS DFTFPAPSPS
1201: SDNFSTFNPN QLQVIVQDLS TTEAKGTESY DSDKEGGFED YF
Arabidopsis Description
XI-JMyosin-16 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2K0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.