CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22791	Canola	cytosol, plastid	98.35	97.67
CDY29324	Canola	cytosol	89.12	89.2
AT1G50360.1	Thale cress	cytosol	89.38	89.07
CDY53932	Canola	cytosol, plastid	88.86	86.45
CDY24591	Canola	cytosol, plastid	85.03	84.3
CDY36068	Canola	cytosol, mitochondrion	80.07	81.2
CDX82270	Canola	cytosol	83.38	80.1
VIT_10s0071g00210.t01	Wine grape	plastid	76.41	74.41
KRG90612	Soybean	cytosol	75.54	74.19
KRH36145	Soybean	cytosol	75.72	73.98
Solyc02g020910.2.1	Tomato	nucleus	73.89	73.38
KRG89103	Soybean	cytosol	74.85	73.13
KRH40907	Soybean	cytosol	74.24	72.91
Os10t0488800-01	Rice	cytosol	59.62	72.11
HORVU1Hr1G043440.4	Barley	cytosol	65.8	66.96
Zm00001d032637_P004	Maize	mitochondrion	68.06	65.66
Zm00001d013967_P004	Maize	mitochondrion	68.15	65.58
EER94044	Sorghum	mitochondrion	67.89	65.22
TraesCS1D01G159600.1	Wheat	mitochondrion	66.75	64.4
GSMUA_Achr1P01870_001	Banana	cytosol	71.02	64.35
TraesCS1B01G179500.2	Wheat	mitochondrion	66.84	64.32
TraesCS1A01G162800.1	Wheat	mitochondrion	66.67	63.94
CDY25361	Canola	cytosol	84.07	62.36
GSMUA_Achr2P10680_001	Banana	cytosol	65.8	59.9
CDY52239	Canola	cytosol	54.4	52.21
CDY28777	Canola	cytosol	53.87	51.63
CDY14319	Canola	cytosol, plastid	53.35	50.87
CDY18321	Canola	cytosol	53.26	50.7
CDX68955	Canola	cytosol	20.54	45.38
CDX91798	Canola	cytosol	19.06	43.45
CDY72648	Canola	cytosol	9.4	39.71
CDX88973	Canola	cytosol	30.46	29.79
CDY00546	Canola	cytosol	30.37	29.06
CDX67724	Canola	cytosol	29.77	27.92
CDX98274	Canola	nucleus	29.85	27.62
CDX81833	Canola	cytosol	34.73	27.24
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	34.64	26.25
CDY66597	Canola	cytosol	34.38	25.95
CDY32922	Canola	cytosol	33.86	25.81
CDY03315	Canola	cytosol	32.9	25.7
CDY39766	Canola	cytosol	32.81	25.65
CDY64313	Canola	cytosol	33.94	25.64
CDY45087	Canola	cytosol	34.46	25.56
CDX70927	Canola	cytosol	34.55	25.51
CDX94736	Canola	cytosol	33.86	25.46
CDX95235	Canola	cytosol	34.03	25.46
CDY42350	Canola	cytosol	33.16	25.35
CDY22325	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.86	25.26
CDY32531	Canola	endoplasmic reticulum	33.16	25.22
CDY10075	Canola	endoplasmic reticulum	33.07	25.08
CDY51846	Canola	cytosol	34.46	25.05
CDX72393	Canola	cytosol	32.55	24.83
CDY46128	Canola	cytosol	32.46	24.83
CDY31130	Canola	cytosol, mitochondrion	32.81	24.48
CDY31978	Canola	cytosol	32.46	24.25
CDX79446	Canola	cytosol	32.46	23.96
CDX84752	Canola	cytosol	32.46	23.89
CDX79520	Canola	endoplasmic reticulum	31.42	23.88
CDY05734	Canola	cytosol	32.72	23.83
CDX75338	Canola	cytosol	32.55	22.57
CDX84695	Canola	cytosol	32.64	21.63
CDX93542	Canola	cytosol	32.2	21.37
CDX95038	Canola	cytosol	31.24	21.22
CDY15512	Canola	cytosol	32.29	21.14
CDX86626	Canola	cytosol	32.11	21.11
CDY19473	Canola	cytosol	32.11	21.07
CDY65572	Canola	plastid	33.68	20.36
CDY35211	Canola	plastid	33.59	20.25
CDY17154	Canola	cytosol	32.11	20.19
CDY69853	Canola	endoplasmic reticulum	6.35	15.11
CDY65579	Canola	endoplasmic reticulum	8.27	8.41
CDY71471	Canola	cytosol	3.39	8.04
CDY16536	Canola	cytosol	2.87	7.35
CDX92461	Canola	cytosol	2.87	7.13
CDY69448	Canola	extracellular, golgi, mitochondrion	1.65	5.76
CDX72394	Canola	nucleus	0.09	0.1

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	GO:A0A078HXQ8	UniProt:A0A078HXQ8	EnsemblPlants:CDY42506	ProteinID:CDY42506	ProteinID:CDY42506.1
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	EnsemblPlantsGene:GSBRNA2T00074955001	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8
InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0004EF3EA1	SEG:seg	:

Description

BnaC06g03520DBnaC06g03520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXQ8]

Coordinates

chrLK032527:-:51511..58806

Molecular Weight (calculated)

129252.0 Da

IEP (calculated)

8.763

GRAVY (calculated)

-0.446

Length

1149 amino acids

Sequence
(BLAST)

0001: MSHKVKPSVQ SLKSMPADYR FLGSPPLSDP LENSSSGSSV SVTIPRNGHL KNGFKGTRDS VGGVDNGNED SPYSVSNGDP VVPLPQSTDR RWSDTSVYAR
0101: KKVLQFWVQL PCGNWELGKV LSTSGEESVV KLPEGNVLKV ISETLVPANP DILDGVDDLM QLSYLNEPAV LYNLEYRYNQ DMIYTKAGPV LVAVNPFKEV
0201: PLYGNSNIEA YRKRSNESPH VYAIADTAIR EMIRDEVNQS IIISGESGAG KTETAKIAMQ YLAALGGGSG IEYEILKTNP ILEAFGNAKT LRNDNSSRFG
0301: KLIEIHFSET GKISGAKVQT FLLEKSRVVQ CAEGERSYHI FYQLCAGASP TLREKLNLTS AEEYKYLQQS NCYSINGVDD AERFQAVTEA LDIVHVSKED
0401: QESVFAMLAA VLWLGNVSFT VIDNENHVEP EEDESLSTVA KLIGCNINEL KLALSNRNMK VRNDTIIQKL TLSQAIDARD ALAKSIYACL FDWLVEQINK
0501: SLAVGKRRTG RSISILDIYG FESFDKNSFE QFCINYANER LQQHFNRHLF KLEQEEYIQD GIDWTRVDFE DNQNCLSLFE KKPLGLLSLL DEESTFPNGT
0601: DLTLANKLKE HLSANSCFRG DRGKTFTVSH YAGEVTYETT GFLEKNRDLL HSDSIKLLSS CSCHLPQAFA SSMLIHSEKP VVGPLYKAGG ADSQRLSVAT
0701: KFKDQLFQLM QRLGNTTPHF IRCIKPNNVQ SPGLYEQGLV LQQLRCCGVL EVVRISRSGF PTRMSHQKFS RRYGFLLLES IAAKDPLSVS VAILHQFNIL
0801: PEMYQVGYTK LFFRTGQIGV LEDTRNRTLH GILRLQSCFR GHQARSRLRE HKRRVTVLQS FVRGEKVRKE YTELLRRHRA SAAIQSHVKR RIAKRQYKAT
0901: VDASVVIQSA IRGELVRRCA GDIGWLKSGG TKRNESDEVL VKASVISELQ RRVLKSEAAL REKEEENDIL RQRLQQYDNR WSEYETKMKS MEEIWQKQMR
1001: SLQSNLSIAK KSLEVEDSAR NSDASVNASD ATELSGSGGD FRTHGRTRSV GVGLSVISRL AEEFGQRAQV FGDDTKFLME VKSGQVEASL DPERELRRLK
1101: QMFDTWKKDY GGRLRETKLI LGKLGSGESG GSAERVKMKW WGRLKSTRF

Best Arabidopsis Sequence Match ( AT1G50360.1 )
(BLAST)

0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY

Arabidopsis Description

VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.