Factsheet for VIT_10s0071g00210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g020910.2.1	Tomato	nucleus	79.49	81.07
KRG89103	Soybean	cytosol	80.59	80.87
KRG90612	Soybean	cytosol	79.83	80.51
KRH40907	Soybean	cytosol	79.66	80.34
KRH36145	Soybean	cytosol	79.83	80.1
Bra001768.1-P	Field mustard	cytosol	76.86	79.84
Bra035834.1-P	Field mustard	cytosol	77.63	79.51
CDY24591	Canola	cytosol, plastid	78.05	79.47
CDY36068	Canola	cytosol, mitochondrion	74.41	77.49
AT1G50360.1	Thale cress	cytosol	74.75	76.5
Bra018844.1-P	Field mustard	cytosol	74.66	76.48
CDY42506	Canola	cytosol, plastid	74.41	76.41
CDY22791	Canola	cytosol, plastid	74.83	76.32
CDX82270	Canola	cytosol	76.78	75.75
AT3G19960.2	Thale cress	cytosol, plastid	75.25	75.51
Os10t0488800-01	Rice	cytosol	60.25	74.84
CDY29324	Canola	cytosol	72.71	74.74
Bra039641.1-P	Field mustard	cytosol	72.63	74.65
CDY53932	Canola	cytosol, plastid	72.63	72.57
HORVU1Hr1G043440.4	Barley	cytosol	66.86	69.88
GSMUA_Achr1P01870_001	Banana	cytosol	73.9	68.77
Zm00001d032637_P004	Maize	mitochondrion	68.98	68.35
Zm00001d013967_P004	Maize	mitochondrion	69.07	68.26
EER94044	Sorghum	mitochondrion	69.15	68.23
TraesCS1D01G159600.1	Wheat	mitochondrion	67.97	67.34
TraesCS1B01G179500.2	Wheat	mitochondrion	67.88	67.09
TraesCS1A01G162800.1	Wheat	mitochondrion	67.63	66.61
GSMUA_Achr2P10680_001	Banana	cytosol	68.14	63.71
CDY25361	Canola	cytosol	77.54	59.07
VIT_19s0014g03640.t01	Wine grape	cytosol	56.86	56.06
VIT_00s0268g00030.t01	Wine grape	cytosol	13.22	35.06
VIT_07s0005g02970.t01	Wine grape	cytosol	30.76	31.76
VIT_04s0079g00370.t01	Wine grape	cytosol	10.85	31.14
VIT_16s0115g00220.t01	Wine grape	cytosol	6.69	29.59
VIT_04s0008g01990.t01	Wine grape	cytosol	33.9	26.25
VIT_11s0016g01710.t01	Wine grape	cytosol	33.47	26.0
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	33.98	25.74
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.05	25.69
VIT_14s0081g00160.t01	Wine grape	cytosol	33.05	25.61
VIT_05s0051g00050.t01	Wine grape	cytosol	32.29	25.6
VIT_13s0320g00070.t01	Wine grape	cytosol	31.86	24.16
VIT_14s0030g02000.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	EntrezGene:100254832	wikigene:100254832	Gene3D:2.30.30.360
MapMan:20.2.4.2	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	ProteinID:CCB58887	ProteinID:CCB58887.1	ncoils:Coil
UniProt:F6HW23	EMBL:FN596260	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150
GO:GO:0009987	GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609
InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100254832
wikigene:LOC100254832	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase
PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844
PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0002109C64
ArrayExpress:VIT_10s0071g00210	EnsemblPlantsGene:VIT_10s0071g00210	EnsemblPlants:VIT_10s0071g00210.t01	unigene:Vvi.22052	RefSeq:XP_002273898	RefSeq:XP_002273898.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:-:16417884..16443806

Molecular Weight (calculated)

133022.0 Da

IEP (calculated)

7.288

GRAVY (calculated)

-0.445

Length

1180 amino acids

Sequence
(BLAST)

0001: MPKSFASESR SPPSLQSIKS LPVGFRFTGS PTSGVSGQSD DVNTENSDVI CDSIPENGDL SGEVVGAIED GAGEMDQASD DTPYDRKTIA IDERPSVGDE
0101: DLGFVAPHLR SVAPSRSEFR WADTTSYAAK KKLQSWFLLP NGNWELGKIL STSGTETVIS LPEGKVLKVN TDSLLPANPD ILDGVDDLMQ LSYLNEPSVL
0201: YNLQHRYNQD MIYTKAGPVL VAINPFKEVP LYGNDYIDAY KRKSIESPHV YAITDTAIRE MRRDEVNQSI IISGESGAGK TETAKIAMQY LAALGGGSGI
0301: EYEILKTNPI LEAFGNAKTS RNDNSSRFGK LIEIHFSETG KISGAKIQTF LLEKSRVVQC AEGERSYHIF YQLCAGAPPA LREKLDLKSA YEYKYLKQSN
0401: CYSITGVDDA EQFRIVVEAL DIVHVSKEDQ ESVFAMLAAV LWMGNVSFTV TDNENHVEAV ADEGLTNVAK LIGCDVGDLK QALSTRKMRV GNDNIIQKLT
0501: LSQAIDTRDA LAKSIYACLF DWLVEQINKS LAVGKRRTGR SISILDIYGF ESFDRNSFEQ FCINYANERL QQHFNRHLFK LEQEEYIQDG IDWNRVDFED
0601: NQDCLNLFEK KPLGLLSLLD EESTFPNGTD LTFANKLKQH LNSNSCFRGE RGKAFSVCHY AGEVMYDTTG FLEKNRDLLH LDSIQLLSSC TCHLPQIFAS
0701: NMLTQSEKPV VGPLYKSGGA DSQKLSVATK FKGQLFQLMQ RLETTTPHFI RCIKPNNFQS PGNYDQGLVL QQLRCCGVLE VVRISRSGFP TRMSHQKFAR
0801: RYGFLLLEGV ASQDPLSVSV AILHQFNILP EMYQVGYTKL FFRTGQIGVL EDTRNHTLHG ILRVQSCFRG HQARCHLRDL RGGIATLQSF VRGEKTRKEF
0901: AILLQRHRAA VVIQKQIRSR IGRKKFMSIY DASIVIQSVI RGWLVRRCSG DLGLLTVGGR KDKESDEVLV KSSFLAELQR RVLKAEAALR EKEEENDILH
1001: QRLQQYENRW SEYELKMKSM EEVWQKQMRS LQSSLSIAKK SLAMDDSRRN SDASVNLTDD RDSSWDTGSN FRGQESNGMR PMSAGLTVIS RMAEEFEQRS
1101: QVFGDDAKFL VEVKSGQTEA SLNPDRELRR LKQMFEAWKK DYGSRLRETK VILQKLGNEE GSGDKARKKW WVRRNSSRFN

Best Arabidopsis Sequence Match ( AT3G19960.5 )
(BLAST)

0001: MSQKVTPFMQ SLKSLPADYR FDGSPVSDRL ENSSGASVRL TNSNVPRKGG LRNGVSRTDT AAGDSEDSPY SGHGVFVEEQ SLTDDVDSGA ATMPLPQSDE
0101: RRWSDTSAYA RKKILQSWIQ LPNGNWELGK ILSTSGEESV ISLPEGKVIK VISETLVPAN PDILDGVDDL MQLSYLNEPS VLYNLNYRYN QDMIYTKAGP
0201: VLVAVNPFKE VPLYGNRYIE AYRKKSNESP HVYAIADTAI REMIRDEVNQ SIIISGESGA GKTETAKIAM QYLAALGGGS GIEYEILKTN PILEAFGNAK
0301: TLRNDNSSRF GKLIEIHFSE SGKISGAQIQ TFLLEKSRVV QCAEGERSYH IFYQLCAGAS PALREKLNLT SAHEYKYLGQ SNCYSINGVD DAERFHTVKE
0401: ALDIVHVSKE DQESVFAMLA AVLWLGNVSF TVIDNENHVE PVADESLSTV AKLIGCNINE LTLTLSKRNM RVRNDTIVQK LTLPQAIDAR DALAKSIYSC
0501: LFDWLVEQIN KSLAVGKRRT GRSISILDIY GFESFDKNSF EQFCINYANE RLQQHFNRHL FKLEQEEYIQ DGIDWTRVDF EDNQNCLSLF EKKPLGLLSL
0601: LDEESTFPNG TDLTLANKLK QHLQSNSCFR GDKGKLFTVV HYAGEVTYET TGFLEKNRDL LHSDSIQLLS SCSCLLPQAF ASSMLIQSEK PVVGPLYKAG
0701: GADSQRLSVA TKFKSQLFQL MQRLGNTTPH FIRCIKPNNI QSPGVYEQGL VLQQLRCCGV LEVVRISRSG FPTRMSHQKF SRRYGFLLVE NIADRDPLSV
0801: SVAILHQFNI LPEMYQVGYT KLFFRTGQIG VLEDTRNRTL HGILRVQSSF RGYQARCLLK ELKRGISILQ SFVRGEKIRK EFAELRRRHK AAATIQSQVK
0901: SKIARIQYKG IADASVVIQS AIRGWLVRRC SGDIGWLKSG GAKTNELGEV LVKASVLSEL QRRVLKAEAA LREKEEENDI LQQRLQQYEN RWSEYETKMK
1001: SMEEIWQKQM RSLQSSLSIA KKSLAVEDSA RNSDASVNAS DATDWDSSSN QFRSQTSNGV GSRLQPMSAG LSVIGRLAEE FEQRAQVFGD DAKFLVEVKS
1101: GQVEANLDPD RELRRLKQMF ETWKKDYGGR LRETKLILSK LGSEESSGSM EKVKRKWWGR RNSTRY

Arabidopsis Description

ATM1Myosin 1 [Source:UniProtKB/TrEMBL;Acc:F4JCF9]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.