Factsheet for VIT_19s0014g03640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13051	Soybean	cytosol	16.37	73.13
KRH22163	Soybean	cytosol	66.67	66.72
KRH27175	Soybean	cytosol	66.5	66.5
KRH55425	Soybean	cytosol	63.33	64.57
KRH26031	Soybean	cytosol	63.49	64.41
AT5G54280.2	Thale cress	cytosol	63.83	62.62
CDY52239	Canola	cytosol	62.24	62.24
Solyc07g063590.2.1	Tomato	cytosol	61.24	61.7
CDY28777	Canola	cytosol	61.74	61.63
CDY14319	Canola	cytosol, plastid	61.82	61.41
Bra002998.1-P	Field mustard	cytosol, plastid	61.74	61.33
CDY18321	Canola	cytosol	61.74	61.23
Bra022708.1-P	Field mustard	cytosol	61.9	61.19
PGSC0003DMT400049643	Potato	cytosol	29.91	60.47
Solyc10g006820.2.1	Tomato	cytosol	58.56	58.27
AT4G27370.2	Thale cress	cytosol	54.39	57.31
VIT_10s0071g00210.t01	Wine grape	plastid	56.06	56.86
EER99532	Sorghum	cytosol	58.15	56.22
Zm00001d006593_P003	Maize	cytosol	57.23	55.2
Os07t0562800-01	Rice	plasma membrane	57.48	54.95
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	58.23	54.88
TraesCS2A01G204700.1	Wheat	cytosol, plastid	57.81	54.79
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	58.15	54.72
Bra031394.1-P	Field mustard	cytosol	30.66	54.29
Zm00001d021785_P002	Maize	cytosol, plastid	53.22	53.62
Bra026355.1-P	Field mustard	cytosol	52.97	50.96
GSMUA_Achr8P03790_001	Banana	cytosol	56.98	50.37
VIT_00s0268g00030.t01	Wine grape	cytosol	12.11	32.58
VIT_04s0079g00370.t01	Wine grape	cytosol	10.61	30.9
VIT_07s0005g02970.t01	Wine grape	cytosol	28.74	30.1
VIT_16s0115g00220.t01	Wine grape	cytosol	6.43	28.84
VIT_04s0008g01990.t01	Wine grape	cytosol	31.91	25.07
VIT_11s0016g01710.t01	Wine grape	cytosol	31.5	24.82
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	32.08	24.65
VIT_05s0051g00050.t01	Wine grape	cytosol	30.58	24.6
VIT_07s0005g04790.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	30.99	24.44
VIT_14s0081g00160.t01	Wine grape	cytosol	30.91	24.29
VIT_13s0320g00070.t01	Wine grape	cytosol	31.58	24.29
VIT_14s0030g02000.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.58.530	EntrezGene:100241905	wikigene:100241905	Gene3D:2.30.30.360	MapMan:20.2.4.2
Gene3D:3.30.70.3240	Gene3D:3.40.850.10	ProteinID:CBI20376	ProteinID:CBI20376.3	ncoils:Coil	UniProt:E0CSS7
EMBL:FN595229	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987
GO:GO:0016459	GO:GO:0016787	GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009
InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	EntrezGene:LOC100241905	wikigene:LOC100241905
InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063
PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140
PANTHER:PTHR13140:SF702	SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI0001BE17F1	ArrayExpress:VIT_19s0014g03640
EnsemblPlantsGene:VIT_19s0014g03640	EnsemblPlants:VIT_19s0014g03640.t01	RefSeq:XP_002281748	RefSeq:XP_002281748.1	SEG:seg	:

Description

No Description!

Coordinates

chr19:+:3750407..3776473

Molecular Weight (calculated)

134319.0 Da

IEP (calculated)

8.538

GRAVY (calculated)

-0.530

Length

1197 amino acids

Sequence
(BLAST)

0001: MLSVSSPTVV RSSLEEMLDS LRKRDEKPKD LPPALPARPT SRSMRLPSTR RSLPVDFKVG GGNAGLDSPV GGAQGKEDVK RKGRELGLRR GGLGSKKRMK
0101: AVQPGDLPYV EAVEEKAETE WDDNVGYFVK KKLPVWCRLP SGQWESGTVQ STTGEEALVL LSDGSVVKVS TGEILPANPD VLVGVDDLIQ LSYLNEPSVV
0201: HNLQYRYSHD IIYSKAGPLL IAVNPFKDVP IYGNDFVTAY SQKVKDSPHV YAIADIAYDE MMRDEVNQSI IISGEIGAGK TETAKIAMQY LAALGGGSDG
0301: IENELTQTSC ILEAFGNAKT SRNNNSSRFG KSIELHFSTF GKICGAKIQT FLLEKQSRVV KLADGERSYH IFYQLCAGAP SILKDKLNIK MASEYHYLNQ
0401: SNCLAIDDVD DARKFHVLMG ALDIVQICKE DQEHAFSMLA AVLWLGNISF QVVDSENHVE VVANEAVTCA ARLIGCSAQE LMLSLSTNKV KAGNGDAAKK
0501: LTLQQAIDAR DVMAKFIYAS LFDWIVVQIN KSLEVGKRPT GRSISILDMY GFGTFQKNSF EQLCINYANE RLQQHFNRHL LKLEQEEYEL DGIDWKRVDF
0601: EDNHECLDLF EKKPLGLLSL LDEESNAPMA TDMSFANKLK QHLVGNPCYK GENGGAFSIR HYAGEVLYDT SGFLEKNRDP LHSDSIQLLS SCSCKLPQLF
0701: ASNLLDHSQK QASPLSLGAF DSQKQSVGTK FKDQLFKLMQ QLENTSPHFI HCIKPNDKQL PGMYEKDLVL EQLRCCGVLE VVRISRSGYP TRMTHQEFAR
0801: RYGFLLPKDN EYQDPLSISV SVLQQFNILP DLYQVGYTKL YFRTGQIDEL EDMRKQVLQG IIVVQKRFRG RQARRYFYEL KGGVTTLQSF GHGENARRGN
0901: DVLVKTWRAD IPTQKHMKQQ VAPQTPDEGA IIHLQSVIRG LLARKHFNHM QGSKKLNLEN ANSRQKSDRR ISDVKDLPQE QGQVLPSDLS KLQHRVLKAE
1001: ATLGQKEEEN AALREQLKQS EAKWSEYEAK MKAMEETWQK QMASLQMSLA AAKKNHAAGQ DGRLDTPSSP GYYDSEGTPS METRTPGANT PVKLSNVGAG
1101: RESNGNLNTV SHLAKEFEQR KQSFDDDAKT LVEVKSGQPS SNMNHDELKK LKQRFEAWKK DYKVRLRETK ARLHKLGHSE GERIRRKWWG KRISKST

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.