Factsheet for PGSC0003DMT400049643

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g063590.2.1	Tomato	cytosol	94.59	47.14
Bra031394.1-P	Field mustard	cytosol	41.05	35.95
VIT_19s0014g03640.t01	Wine grape	cytosol	60.47	29.91
KRH22163	Soybean	cytosol	57.94	28.68
KRH27175	Soybean	cytosol	57.09	28.24
KRH26031	Soybean	cytosol	54.39	27.29
KRH55425	Soybean	cytosol	54.05	27.26
CDY52239	Canola	cytosol	54.05	26.73
AT5G54280.2	Thale cress	cytosol	54.56	26.48
CDY28777	Canola	cytosol	53.55	26.44
CDY14319	Canola	cytosol, plastid	53.55	26.31
Bra002998.1-P	Field mustard	cytosol, plastid	53.55	26.31
CDY18321	Canola	cytosol	53.21	26.1
Bra022708.1-P	Field mustard	cytosol	53.21	26.01
AT4G27370.2	Thale cress	cytosol	47.97	25.0
TraesCS2A01G204700.1	Wheat	cytosol, plastid	50.17	23.52
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	50.34	23.43
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	50.17	23.39
EER99532	Sorghum	cytosol	48.82	23.34
Os07t0562800-01	Rice	plasma membrane	49.16	23.24
Zm00001d006593_P003	Maize	cytosol	48.65	23.21
Bra026355.1-P	Field mustard	cytosol	45.61	21.7
GSMUA_Achr8P03790_001	Banana	cytosol	48.82	21.34
Zm00001d021785_P002	Maize	cytosol, plastid	41.39	20.62
PGSC0003DMT400038143	Potato	cytosol	17.06	11.85
PGSC0003DMT400053991	Potato	cytosol	29.56	11.45
PGSC0003DMT400056647	Potato	cytosol	28.72	11.23
PGSC0003DMT400079921	Potato	cytosol	28.89	10.88
PGSC0003DMT400028274	Potato	cytosol	9.63	7.65
KRH13051	Soybean	cytosol	0.51	1.12
PGSC0003DMT400064422	Potato	cytosol	0.17	0.27

Protein Annotations

Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:3.30.70.3240	Gene3D:3.40.850.10	MapMan:35.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459
GO:GO:0016787	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf
UniProt:M1BP35	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	EnsemblPlantsGene:PGSC0003DMG400019284
PGSC:PGSC0003DMG400019284	EnsemblPlants:PGSC0003DMT400049643	PFscan:PS50096	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF702
SMART:SM00015	SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000296395B	SEG:seg	:

Description

Myosin VIII-B [Source:PGSC_GENE;Acc:PGSC0003DMG400019284]

Coordinates

chr7:+:53728011..53733726

Molecular Weight (calculated)

67919.5 Da

IEP (calculated)

9.474

GRAVY (calculated)

-0.640

Length

592 amino acids

Sequence
(BLAST)

001: MIQEYELDGI DWSKVDFEDN QECLNLFEKK PIGLISLLNE ESNSLKATDL TFACKLKQHI KSSPCFKSER EEFCIRHYAG EVTYDATGFL AKNRDVLHPD
101: IIQLLSSSDS HLPEDKKFSI PSTDTGVLDF KKQSVATKFK DNLFKLMQQL ENTIPHFICC IKPNNKQLPG MSDKDLVIEQ LRCCGVLEVV RISRSGYPTR
201: LTHQEFTSRY GFLLPKDNAC QDPLSMSVAI LHQFGILPEL YQVGYTKLYF RSGQIASLED VRNQVLQGTL EVQKCFRRHR ARRHFHELKG GVIILQSFIR
301: GEIERRLYNT KVMSKGKVAR EGSDEQLVAV VQIQSAIRGW LARRDLRKLQ NSKMLNVDKR RSGRKTEVKE LPREILPSVV EDLERRVAKA EATIEQKEKE
401: NAALKEQANQ FEARCLEYEV KMRSMEEMWQ KQMTSLQANL AAAKNTLAAG DTTGQPGKLE GSPSPHYYDS DDATSMDTPA GRTPINFSNN SLGVVTNREV
501: NGGLSLISHL TMEFEQRKQN FDNEAMAIVH LKPGLLHSTN NPADEYRRLK HRFEEWKKEY KVRLKETKSK VHKLVHSKAG KSHRKWWGKK SK

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.