Factsheet for Bra022708.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plasma membrane 1
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28777	Canola	cytosol	96.45	97.41
Bra002998.1-P	Field mustard	cytosol, plastid	88.69	89.13
AT5G54280.2	Thale cress	cytosol	89.76	89.1
KRH13051	Soybean	cytosol	16.68	75.37
Bra031394.1-P	Field mustard	cytosol	35.76	64.05
KRH22163	Soybean	cytosol	63.17	63.96
KRH27175	Soybean	cytosol	63.17	63.91
VIT_19s0014g03640.t01	Wine grape	cytosol	61.19	61.9
KRH55425	Soybean	cytosol	58.38	60.22
KRH26031	Soybean	cytosol	58.3	59.83
Bra026355.1-P	Field mustard	cytosol	61.19	59.57
Solyc07g063590.2.1	Tomato	cytosol	55.16	56.23
Bra001768.1-P	Field mustard	cytosol	51.94	55.37
Bra035834.1-P	Field mustard	cytosol	52.35	55.03
Bra018844.1-P	Field mustard	cytosol	51.94	54.6
EER99532	Sorghum	cytosol	55.33	54.12
Solyc10g006820.2.1	Tomato	cytosol	53.67	54.03
Bra039641.1-P	Field mustard	cytosol	51.03	53.83
PGSC0003DMT400049643	Potato	cytosol	26.01	53.21
Zm00001d006593_P003	Maize	cytosol	54.42	53.1
Os07t0562800-01	Rice	plasma membrane	54.58	52.8
TraesCS2A01G204700.1	Wheat	cytosol, plastid	54.5	52.26
TraesCS2D01G211200.5	Wheat	cytosol, endoplasmic reticulum	54.17	51.65
TraesCS2B01G232300.1	Wheat	cytosol, endoplasmic reticulum	54.17	51.57
Zm00001d021785_P002	Maize	cytosol, plastid	50.12	51.09
GSMUA_Achr8P03790_001	Banana	cytosol	53.51	47.86
Bra014582.1-P	Field mustard	cytosol	27.99	28.85
Bra003324.1-P	Field mustard	cytosol	28.24	27.76
Bra027512.1-P	Field mustard	cytosol	27.0	26.59
Bra030993.1-P	Field mustard	cytosol	33.11	26.56
Bra036688.1-P	Field mustard	cytosol	31.38	26.3
Bra011426.1-P	Field mustard	cytosol	32.04	25.58
Bra020105.1-P	Field mustard	cytosol	32.12	25.47
Bra032526.1-P	Field mustard	cytosol	31.63	25.47
Bra027968.1-P	Field mustard	cytosol	31.79	25.35
Bra036460.1-P	Field mustard	cytosol	30.97	25.2
Bra006561.1-P	Field mustard	cytosol	31.96	25.18
Bra011053.1-P	Field mustard	cytosol	31.3	25.17
Bra037016.1-P	Field mustard	cytosol	30.8	24.77
Bra030739.1-P	Field mustard	cytosol	30.55	23.82
Bra033704.1-P	Field mustard	cytosol, plastid	31.87	23.28
Bra018605.1-P	Field mustard	cytosol	32.04	21.98
Bra030576.1-P	Field mustard	cytosol	29.07	20.82
Bra022871.1-P	Field mustard	cytosol	31.46	17.25
Bra002304.1-P	Field mustard	cytosol	2.31	6.42

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EnsemblPlantsGene:Bra022708	EnsemblPlants:Bra022708.1	EnsemblPlants:Bra022708.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M4E1Q8	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096
PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF702	SMART:SM00015	SMART:SM00242
SUPFAM:SSF52540	UniParc:UPI000254686B	SEG:seg	:	:	:

Description

AT5G54280 (E=0.0) ATM2, ATMYOS1, ATM4 | ATM2 (ARABIDOPSIS THALIANA MYOSIN 2); motor

Coordinates

chrA02:+:7885222..7890847

Molecular Weight (calculated)

137675.0 Da

IEP (calculated)

8.452

GRAVY (calculated)

-0.559

Length

1211 amino acids

Sequence
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PRDVPPALPS RPNSRARLPS ARRSLPAKFN VSSVMEDQNQ NGKEETEAEK KEEGKRKEKD LGVKRKSFGS
0101: KKMRTGYGSE SPYVLEEKEE EGEGVKVSAA TKVSSVENKE EQKPEWNNNL EYFINKKLRV WCRVANGEWQ LGKIQSTSAD TSLVMLSTAN VVKVSTEDLF
0201: PANPDILEGV EDLIQLSYLN EPSVLYNLRV RYSQDVIYSK AGPVLIAVNP FKSVQIYGND IISAYQKKAV DAPHVYAVAD AAYDEMMREE KNQSIIISGE
0301: SGAGKTETAK YAMQYLAALG GGSCGVEYEI LKTTSILEAF GNAKTSRNAN SSRFGKLIEI HFSAMGKICG AKLETFLLEK SRVAQLFNGE RSYHIFYELC
0401: AGASPILKER LKLKTASEYT YLNQSDCLTI DGVDDAQKFR KLLEAFDIVQ IPKEHQERVF ALLAAVLWLG NVSFRVTDNE NHVEVVADEG RIIYSVTNAA
0501: MLMGCNLEEL MVVLSTRKLQ AGADCIAKKL TLRQATDMRD GIAKFIYASL FDWLVEQINI ALEVGKSISG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFE DNQECLDLIE KKPIGLLSVL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLIHLLAS CDCQLLKLFS TKMRNKSQKP LLLSDSTNQT VGTKFKGQLF KLMNTLENTT PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVSQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRAGQ IGIFEDRRKK ILQGIVGLQK RLRGHLSREY
0901: FQSVRNGALV LQSYVRGEIG RRMFDIEAKL HADSVSEAST GELTAVIHLQ SAVRGWLARK RFNSMQRQKE LLNVTTLSKK RAGLRISEDK EEFKVQPSAM
1001: SDLQKRVLES ETALLQKEEE NTALREQLRQ FEEKWSEYEI KMKSMEETWQ KQMSSLQMSL AAARKSLATE NVTGQAGGGR QDTSTSPFGY ESEDTTSTTA
1101: TPGLRTPTTN FTNGNTPELR SRELNGSLNA VNHLAREFDQ RRLNFDEDAR AIVEVKVEPE ATGQQQQHPE DEFRRLKLRF ETWKKDYKAR LRETKARLHS
1201: DKRRHRKWWG K

Best Arabidopsis Sequence Match ( AT5G54280.2 )
(BLAST)

0001: MMLSASPNTL AKSSLEEMLE SLRQKDECDR PKDMPPALPS RPNSRARLPS ARRSLPANFN VSSVMEDQNG SVVSVTPAVE AESERKEEGV KRKEKDLGVK
0101: RNSFGSKKMR TGLRSESPYA AEKEEEGVKI SIAKVSLVEN TEEHNKPESE WNNNVEYFIK KKLRVWCRVS NGQWQLGKIQ STSADTSLVM LSTANVVKVS
0201: TEELFPANPD ILEGVEDLIQ LSYLNEPSVL YNLRVRYLQD VIYSKAGPVL IAVNPFKNVE IYGNDVISAY QKKVMDAPHV YAVADAAYDE MMREEKNQSL
0301: IISGESGAGK TETAKFAMQY LAALGGGSCG VEYEILKTTC ILEAFGNAKT SRNANSSRFG KLIEIHFSAM GKICGAKLET FLLEKSRVVQ LFNGERSYHI
0401: FYELCAGASP ILKERLKLKT ASEYTYLSQS DCLTIAGVDD AQKFHKLLEA FDIVQIPKEH QERAFALLAA VLWLGNVSFR VTDNENHVEV VADEAVANAA
0501: MLMGCNTEEL MVVLSTRKLQ AGTDCIAKKL TLRQATDMRD GIAKFIYANL FDWLVEQINI ALEVGKSRTG RSISILDIYG FESFKNNSFE QFCINYANER
0601: LQQHFNRHLF KLEQEEYEED GIDWTKVEFV DNQECLDLIE KKPIGLLSLL DEESNFPKAT DLTFANKLKQ HLKTNSCFKG ERGRAFRVNH YAGEVLYDTN
0701: GFLEKNRDPL PADLINLLSS CDCQLLKLFS TKMRGKSQKP LMLSDSTNQT VGTKFKGQLF KLMNKLENTS PHFIRCIKPN SKQLPRVYEE DLVLQQLRCC
0801: GVLEVVRISR SGYPTRLTHQ EFAGRYGFLL SDKKVAQDPL SVSIAVLKQY DVHPEMYQVG YTKLYLRTGQ IGIFEDRRKK VLQGIVGLQK HFRGHLSRAY
0901: FQNMRKVTLV LQSYIRGENA RRLFDTEAKF HADSVSEAST DELSAVIHLQ SAVRGWLARK HFNSMQRQKE LRNVATKSKR KAGRRISEDK DIPLEQPQVQ
1001: PTSMSDLQKR ILKSEAALSQ KEEENTALRE QLRQFEERWS EYDIKMKSME ETWQKQMSSL QMSLAAARKS LAAESITGQA GGRQDTSISP FGYDSEDTMS
1101: TGTPGVRTPT NKFTNGNTPE LRIRELNGSL NAVNHLAREF DQRRLNFDED ARAIVEVKLG PQATPNGQQQ QHPEDEFRRL KLRFETWKKD YKARLRDTKA
1201: RLHRVDGDKG RHRKWWGKRG

Arabidopsis Description

VIII-2Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:F4K0A6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.