Factsheet for Bra027968.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42350	Canola	cytosol	97.76	98.8
AT1G54560.1	Thale cress	cytosol	93.35	92.74
Bra030739.1-P	Field mustard	cytosol	87.16	85.25
VIT_14s0081g00160.t01	Wine grape	cytosol	84.13	83.91
KRG92711	Soybean	cytosol	83.81	83.04
KRH34117	Soybean	cytosol	83.28	82.57
Solyc11g006220.1.1	Tomato	cytosol, extracellular	81.3	80.93
KRH68770	Soybean	cytosol	80.58	80.79
GSMUA_Achr7P26040_001	Banana	cytosol	28.11	80.26
Os06t0488200-01	Rice	cytosol, plasma membrane	80.45	79.92
OQU76115	Sorghum	cytosol	77.35	79.34
Zm00001d044819_P002	Maize	cytosol	79.79	79.27
TraesCS7D01G190300.1	Wheat	cytosol	79.13	78.56
TraesCS7B01G094100.1	Wheat	cytosol	77.95	77.28
HORVU7Hr1G038500.56	Barley	cytosol	79.2	77.02
GSMUA_Achr4P14090_001	Banana	cytosol	78.74	76.96
Bra018605.1-P	Field mustard	cytosol	88.81	76.43
Bra006561.1-P	Field mustard	cytosol	72.48	71.63
Bra020105.1-P	Field mustard	cytosol	71.69	71.32
Bra030993.1-P	Field mustard	cytosol	66.23	66.62
GSMUA_Achr7P26030_001	Banana	cytosol	50.03	63.65
GSMUA_Achr4P07150_001	Banana	cytosol, mitochondrion, nucleus, plastid	81.24	61.55
Bra011053.1-P	Field mustard	cytosol	60.96	61.49
Bra032526.1-P	Field mustard	cytosol	60.11	60.7
Bra027512.1-P	Field mustard	cytosol	48.32	59.67
Bra014582.1-P	Field mustard	cytosol	45.95	59.4
Bra036688.1-P	Field mustard	cytosol	55.96	58.82
Bra036460.1-P	Field mustard	cytosol	55.04	56.18
Bra003324.1-P	Field mustard	cytosol	45.56	56.17
Bra033704.1-P	Field mustard	cytosol, plastid	60.9	55.79
Bra011426.1-P	Field mustard	cytosol	54.25	54.32
Bra037016.1-P	Field mustard	cytosol	52.01	52.46
Bra002304.1-P	Field mustard	cytosol	13.89	48.39
Bra030576.1-P	Field mustard	cytosol	52.67	47.31
Bra022871.1-P	Field mustard	cytosol	60.63	41.69
Bra001768.1-P	Field mustard	cytosol	25.41	33.98
Bra035834.1-P	Field mustard	cytosol	25.61	33.77
Bra018844.1-P	Field mustard	cytosol	25.41	33.51
Bra039641.1-P	Field mustard	cytosol	25.08	33.19
Bra022708.1-P	Field mustard	cytosol	25.35	31.79
Bra031394.1-P	Field mustard	cytosol	14.09	31.66
Bra002998.1-P	Field mustard	cytosol, plastid	24.75	31.2
Bra026355.1-P	Field mustard	cytosol	22.65	27.65

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EnsemblPlantsGene:Bra027968	EnsemblPlants:Bra027968.1	EnsemblPlants:Bra027968.1-P	ncoils:Coil	InterPro:Dilute_dom
GO:GO:0000003	GO:GO:0000146	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777
GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0008017
GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987	GO:GO:0016043
GO:GO:0016049	GO:GO:0016459	GO:GO:0016787	GO:GO:0030154	GO:GO:0040007	GO:GO:0051640
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710	InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	UniProt:M4EGQ4	InterPro:MYSc_Myo11	InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_head_motor_dom
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PFAM:PF01843	PFAM:PF02736	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51126	PFscan:PS51456	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM00015
SMART:SM00242	SMART:SM01132	SUPFAM:SSF52540	UniParc:UPI0002542233	SEG:seg	:

Description

AT1G54560 (E=0.0) XIE, ATXIE | XIE; motor/ protein binding

Coordinates

chrA09:+:10215892..10223883

Molecular Weight (calculated)

172516.0 Da

IEP (calculated)

9.094

GRAVY (calculated)

-0.407

Length

1519 amino acids

Sequence
(BLAST)

0001: MILGTPVNII VGSHVWVEDT DVAWIDGQVE KINGQDVEIT AKLSKIYPKD MEAPAGGVDD MTKLSYLHEP GVLQNLKIRY ELNEIYTYTG NILIAINPFQ
0101: RLPHIYDAHM MQQYKGAPFG ELSPHVFAVA DVAYRAMINE GKSNSILVSG ESGAGKTETT KMLMRYLAYL GGRAVTEGRT VEQQVLESNP VLEAFGNAKT
0201: VRNNNSSRFG KFVEIQFDKQ GRISGAAVRT YLLERSRVCQ ISDPERNYHC FYLLCAAPQE EIEKYKLGHP KTFHYLNQSK CFELVGISDA HDYIATRRAM
0301: DIVGISEKEQ EAIFRVVAAI LHIGNIEFTK GKDVDSSVPK DDKAKFHLNT VAELLMCDVK ELEDALCKRV MVTPEEVIKR SLDPQSAAIS RDGLAKTIYS
0401: RLFDWLVQKI NVSIGQDANS RSLIGVLDIY GFESFKTNSF EQFCINFTNE KLQQHFNQHV FKMEQEEYTK EAIDWSYIEF VDNKDVLDLI EKKPGGIVAL
0501: LDEACMFPKS THETFANKLY QTFKTNKRFI KPKLSRTDFT VSHYAGEVQY QSDQFLDKNK DYVIAEHQDL LGASKCPFVV GLFPKLEETS KSSKFSSIGS
0601: RVKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAIFENINI MQQLRCGGVL EAIRISCAGF PTRKPFFEFV NRFGLLSPEA LEGNYEEKAA SKKILDNIGL
0701: KGYQIGKTKI FLRAGQMAEL DARRALVLSD AAKKIQRRIR THQARRRFIL LREATISLQA LCRGRLSSKL FENLRRQAAA VKIQKNGRRY HSRKAYKNMH
0801: VAALAVQTGL RAMAAHKEFR FKKQTKAATT IQAQWRCHRA TSYYKKLKKG VILSQSRWRG RLAKKELRKL KMASRETGAL KEAKDILEKK VEELTYRVQL
0901: EKRLRVDLEE QKTQEITKMQ SSMEEMRKKV EETNVLLVKE REAAKKAIEE APPVVTETQV VVEDTQKIES LTEQVEGLKT DLEQEKQRAD DAARKFDEAQ
1001: ESNEERKNKL EETEKKVQLL QENITRLEEK CTNLESENKV LRQQAVSIAP NKLLSGRSRS ILQRGSASGH LSVDARPSLD LHSHSINHRD IAEVEDKPQK
1101: SLNEKQQENQ ELLIRCIVQH LGFQGNRPIT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG HAIETQDNND ILAYWLSNAS TLLLLLQRTL KASGAAGMAP
1201: QRRRSSSATL FGRMTQSFRG APQGVNLSMI NGGADTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL VKGASRSVGN
1301: SEAQQALIAH WQGIVKSLTN FLNTLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YKATDEYAGS SWDELKHIRQ
1401: AIGFLVIHQK PQKTLDEISH DLCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS MERIEIGDVE
1501: PPPLIRENSG FSFLLPCSG

Best Arabidopsis Sequence Match ( AT1G54560.2 )
(BLAST)

0001: MGTPVNIIVG SHVWIEDSDV AWIDGLVEKI NGQDVEVQAT NGKKITAKLS KIYPKDMEAP AGGVDDMTKL SYLHEPGVLQ NLKIRYELNE IYTYTGNILI
0101: AINPFQRLPH IYDAHMMQQY KGAPFGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAVRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEELEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYI
0301: ATRRAMDIVG MSEKEQEAIF RVVAAILHLG NVEFTKGKEV DSSVPKDDKS KFHLNTVAEL LMCDVKALED ALCKRVMVTP EEVIKRSLDP QSALISRDGL
0401: AKTIYSRLFD WLVEKINVSI GQDATSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVQYQSDL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NSTEPHYIRC VKPNNLLKPA VFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLYPRALEG NYEEKAAAQK
0701: ILDNIGLKGY QVGKTKVFLR AGQMAELDAR RTMVLSAAAK KIQRRIRTHQ AQRRFILLRK ATISLQALCR GRLSSKIFDN LRRQAAAVKI QKNARRLHSR
0801: KSYKNLHVAA LVVQTGLRAM AAHKQFRFRK QTKAATTIQA QFRCHRATLY FKKLKKGVIL SQTRWRGKLA RRELRQLKMA SRETGALKEA KDMLEKKVEE
0901: LTYRAQLEKR SRVDLEEEKN QEIKKLQSSL EEMRKKVDET NGLLVKEREA AKKAIEEAPP VVTETQVLVE DTQKIEALTE EVEGLKANLE QEKQRADDAT
1001: RKFDEAQESS EDRKKKLEDT EKKAQQLQES VTRLEEKCNN LESENKVLRQ QAVSIAPNKF LSGRSRSILQ RGSESGHLSV DARPSLDLHS HSINRRDLSE
1101: VDDKPQKSLN EKQQENQELL IRCIVQHLGF QGKRPVTACI IYKCLLQWRS FEVERTSVFD RIIQTIGQAI ETQDNNNILA YWLSNASTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MTQSFRGTPQ GVNLAMINGG VDTLRQVEAK YPALLFKQQL TAYVEKIYGM IRDNLKKEIS PLLGLCIQAP RTSRASLVKG
1301: ASRSVGNTAA QQALIAHWQG IVKSLTNFLN NLKSNHVPPF LVRKVFTQIF SFINVQLFNS LLLRRECCSF SNGEYVKAGL AELEHWCYNA TDEYAGSSWD
1401: ELKHIRQAIG FLVIHQKPKK TLDEISHELC PVLSIQQLYR ISTMYWDDKY GTHSVSPDVI ANMRVLMTED SNNAVSNSFL LDDDSSIPFS VDDLSKSMER
1501: IEIGDVEPPP LIRENSGFSF LLPCSD

Arabidopsis Description

XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.