Factsheet for Bra039641.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29324	Canola	cytosol	99.56	99.56
Bra018844.1-P	Field mustard	cytosol	89.55	89.24
AT1G50360.1	Thale cress	cytosol	86.41	86.04
Bra001768.1-P	Field mustard	cytosol	81.18	82.04
Bra035834.1-P	Field mustard	cytosol	81.71	81.42
KRG90612	Soybean	cytosol	74.48	73.08
KRH36145	Soybean	cytosol	74.74	72.96
VIT_10s0071g00210.t01	Wine grape	plastid	74.65	72.63
Solyc02g020910.2.1	Tomato	nucleus	72.82	72.26
KRG89103	Soybean	cytosol	73.34	71.6
KRH40907	Soybean	cytosol	72.39	71.03
Os10t0488800-01	Rice	cytosol	58.1	70.21
HORVU1Hr1G043440.4	Barley	cytosol	64.72	65.81
Zm00001d032637_P004	Maize	mitochondrion	67.33	64.9
Zm00001d013967_P004	Maize	mitochondrion	67.42	64.82
EER94044	Sorghum	mitochondrion	67.16	64.46
TraesCS1B01G179500.2	Wheat	mitochondrion	66.03	63.48
TraesCS1D01G159600.1	Wheat	mitochondrion	65.77	63.39
TraesCS1A01G162800.1	Wheat	mitochondrion	65.85	63.11
GSMUA_Achr1P01870_001	Banana	cytosol	69.25	62.7
GSMUA_Achr2P10680_001	Banana	cytosol	64.55	58.72
Bra022708.1-P	Field mustard	cytosol	53.83	51.03
Bra002998.1-P	Field mustard	cytosol, plastid	53.05	50.54
Bra031394.1-P	Field mustard	cytosol	27.61	46.89
Bra026355.1-P	Field mustard	cytosol	47.82	44.13
Bra014582.1-P	Field mustard	cytosol	30.14	29.45
Bra003324.1-P	Field mustard	cytosol	29.7	27.68
Bra027512.1-P	Field mustard	cytosol	28.05	26.18
Bra030993.1-P	Field mustard	cytosol	34.23	26.03
Bra036688.1-P	Field mustard	cytosol	32.67	25.95
Bra011426.1-P	Field mustard	cytosol	33.71	25.51
Bra020105.1-P	Field mustard	cytosol	33.88	25.47
Bra011053.1-P	Field mustard	cytosol	33.36	25.43
Bra032526.1-P	Field mustard	cytosol	33.19	25.33
Bra006561.1-P	Field mustard	cytosol	33.71	25.18
Bra027968.1-P	Field mustard	cytosol	33.19	25.08
Bra037016.1-P	Field mustard	cytosol	32.75	24.97
Bra036460.1-P	Field mustard	cytosol	32.32	24.93
Bra033704.1-P	Field mustard	cytosol, plastid	34.23	23.7
Bra030739.1-P	Field mustard	cytosol	31.53	23.31
Bra018605.1-P	Field mustard	cytosol	33.28	21.64
Bra030576.1-P	Field mustard	cytosol	30.49	20.7
Bra022871.1-P	Field mustard	cytosol	32.49	16.89
Bra002304.1-P	Field mustard	cytosol	2.61	6.88

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EnsemblPlantsGene:Bra039641	EnsemblPlants:Bra039641.1	EnsemblPlants:Bra039641.1-P	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016459	GO:GO:0016787
GO:GO:0051015	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961
InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M4FEW9	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N
InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PRINTS:PR00193	PFscan:PS50096
PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015	SMART:SM00242
SUPFAM:SSF52540	UniParc:UPI000253EA45	SEG:seg	:	:	:

Description

AT1G50360 (E=0.0) VIIIA, ATVIIIA | VIIIA; motor

Coordinates

chrScaffold000172:-:110173..116117

Molecular Weight (calculated)

129466.0 Da

IEP (calculated)

9.058

GRAVY (calculated)

-0.467

Length

1148 amino acids

Sequence
(BLAST)

0001: MSEKKAKPFV QSLKSMPADY RFLGSSPLED SSSSGSSVPV SIPRNGHLKN GAVGGVDSGS EDSPYGLQSI SNGDESSLVD EDPIVPLPES NDRRWSDTSV
0101: YARKKALQFW VQLPNGNWEL GKVLSTSGDE SVIKLPEGNV LKVISETLVP ANPDILDGVD DLMQLSYLNE PSVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGDRN IEAYRKRSNQ SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLASLGG GSGIENEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETRKISGAK IQTFLLEKSR VVQCAEGERS YHIFYQLCAG ASPALREKLN LTSAKEYNYL RQSNCYSIKG VDDAERFQAV QEALDIVHVS
0401: KDDQESVFAM LAAVLWLGNV SFSIIDNENH AEPESDESLS TVARLIGCNI NDLKLALSKR NIKVRNETFV QKLTLSQAID ARDALAKSIY ASLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IKDGIDWTRV DFEDNQTCLR LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKEHLSDNSC FRGDRGKTFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIKL LSSCSRDLPQ AFASSMLVHS EKPVVGSLHK AGGADSQRLS
0701: VATKFKGQLF ELMQRLGKTT PHFIRCIKPN SVQSPGLYEQ ELVLQQLRCC GVLEVVRISR SGFPTRMSHQ KFALRYGFLL LESIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS CFRGHQARSR LREYKRGITY LQSFVRGEKI RKEYTELLRR HRACSAIQSH VKRSIAKRRY
0901: KAKVDASLVI QSAIRGELVR RCGGDIKYGG TKRNESGEVL VQASVLSELQ RRALRTEAAL REKEEENDIL RQRLQQYDNR WSEYEMKMKS MEEIWQKQMR
1001: SLQSSLSIAK RSLDVEGSPR YSDASVNASD ASDFSVSGDF RTPGRSGSVG LSVISRLAEE FGQRAQVFGD DTKFLMEVKS GKVEANLSPE RELRRLKQMF
1101: ETWKKDYGGR LRETKTILSR LGNEETGGSP LVERVKTKWW GRLRSTRF

Best Arabidopsis Sequence Match ( AT1G50360.1 )
(BLAST)

0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY

Arabidopsis Description

VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.