Factsheet for AT1G50360.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018844.1-P	Field mustard	cytosol	89.68	89.76
CDY22791	Canola	cytosol, plastid	89.85	89.54
CDY42506	Canola	cytosol, plastid	89.07	89.38
CDY29324	Canola	cytosol	86.3	86.67
Bra039641.1-P	Field mustard	cytosol	86.04	86.41
CDY53932	Canola	cytosol, plastid	85.86	83.83
AT3G19960.2	Thale cress	cytosol, plastid	82.65	81.04
KRG90612	Soybean	cytosol	76.5	75.38
KRH36145	Soybean	cytosol	76.76	75.26
VIT_10s0071g00210.t01	Wine grape	plastid	76.5	74.75
KRG89103	Soybean	cytosol	75.8	74.32
Solyc02g020910.2.1	Tomato	nucleus	74.24	73.98
KRH40907	Soybean	cytosol	74.85	73.76
Os10t0488800-01	Rice	cytosol	58.89	71.47
HORVU1Hr1G043440.4	Barley	cytosol	65.22	66.61
Zm00001d013967_P004	Maize	mitochondrion	67.22	64.91
Zm00001d032637_P004	Maize	mitochondrion	67.04	64.9
GSMUA_Achr1P01870_001	Banana	cytosol	71.21	64.75
EER94044	Sorghum	mitochondrion	67.04	64.63
TraesCS1B01G179500.2	Wheat	mitochondrion	66.18	63.9
TraesCS1D01G159600.1	Wheat	mitochondrion	65.92	63.81
TraesCS1A01G162800.1	Wheat	mitochondrion	66.18	63.69
GSMUA_Achr2P10680_001	Banana	cytosol	65.57	59.9
AT4G27370.2	Thale cress	cytosol	51.26	52.02
AT5G54280.2	Thale cress	cytosol	53.86	50.9
AT3G58160.1	Thale cress	cytosol	30.36	28.18
AT4G28710.1	Thale cress	cytosol	34.0	25.86
AT1G08730.1	Thale cress	endoplasmic reticulum	34.43	25.81
AT5G20490.2	Thale cress	cytosol	34.26	25.8
AT1G17580.1	Thale cress	cytosol	33.91	25.72
AT1G54560.1	Thale cress	cytosol	34.09	25.7
AT1G04160.1	Thale cress	cytosol	33.13	25.47
AT2G20290.1	Thale cress	endoplasmic reticulum	32.87	25.39
AT5G43900.3	Thale cress	cytosol	34.35	25.3
AT4G33200.4	Thale cress	cytosol	33.04	25.02
AT2G31900.2	Thale cress	cytosol	32.35	23.96
AT1G04600.1	Thale cress	cytosol	32.87	21.91
AT2G33240.1	Thale cress	cytosol	32.7	21.3
AT5G20470.1	Thale cress	endoplasmic reticulum	3.9	8.09

Protein Annotations

Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	Gene3D:2.30.30.360	MapMan:20.2.4.2	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EntrezGene:841458	ProteinID:AAD50052.1	ProteinID:AEE32540.1	EMBL:AK220707	EMBL:AK220837
EMBL:AK220844	ArrayExpress:AT1G50360	EnsemblPlantsGene:AT1G50360	RefSeq:AT1G50360	TAIR:AT1G50360	RefSeq:AT1G50360-TAIR-G
EnsemblPlants:AT1G50360.1	TAIR:AT1G50360.1	Unigene:At.43410	ncoils:Coil	UniProt:F4I507	GO:GO:0000166
GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005856	GO:GO:0005886	GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0016020	GO:GO:0016459	GO:GO:0016787	GO:GO:0030048	GO:GO:0051015
InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR004009	InterPro:IPR008989	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS
InterPro:Kinesin_motor_dom_sf	InterPro:MYSc_Myo8	InterPro:Myosin_N	InterPro:Myosin_S1_N	InterPro:Myosin_head_motor_dom	RefSeq:NP_175453.2
InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037
PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00193
PFscan:PS50096	PFscan:PS51456	PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF685	SMART:SM00015
SMART:SM00242	SUPFAM:SSF52540	UniParc:UPI000034F479	Symbol:VIIIA	SEG:seg	:

Description

VIII-AMyosin-3 [Source:UniProtKB/Swiss-Prot;Acc:F4I507]

Coordinates

chr1:+:18649706..18657400

Molecular Weight (calculated)

130016.0 Da

IEP (calculated)

8.501

GRAVY (calculated)

-0.441

Length

1153 amino acids

Sequence
(BLAST)

0001: MAHKVKASFQ SLKTMPADYR FLGSPISDHL ETNLITPPNG HLKNGVNGTA SSVGGMDSVN EDSPYSVRSI LNGERSSIGD GDSILPLPES NDRKWSDTNV
0101: YARKKVLQFW VQLPNGNWEL GKIMSTSGEE SVIVVTEGKV LKVKSETLVP ANPDILDGVD DLMQLSYLNE PAVLYNLEYR YNQDMIYTKA GPVLVAVNPF
0201: KEVPLYGNRN IEAYRKRSNE SPHVYAIADT AIREMIRDEV NQSIIISGES GAGKTETAKI AMQYLAALGG GSGIEYEILK TNPILEAFGN AKTLRNDNSS
0301: RFGKLIEIHF SETGKISGAQ IQTFLLEKSR VVQCTEGERS YHIFYQLCAG ASPTLREKLN LTSAKQYNYL KQSNCYSING VDDAERFHAV KEALDIVHVS
0401: KEDQENVFAM LAAVLWLGNV SFTIIDNENH VEPEPDESLS TVAKLIGCNI NELKLALSKR NMRVNNDTIV QKLTLSQAID ARDALAKSIY ACLFDWLVEQ
0501: INKSLAVGKR RTGRSISILD IYGFESFNKN SFEQFCINYA NERLQQHFNR HLFKLEQEEY IQDGIDWTRV DFEDNQECLS LFEKKPLGLL SLLDEESTFP
0601: NGTDLTLANK LKQHLNDNSC FRGDRGKAFT VAHYAGEVTY ETTGFLEKNR DLLHSDSIQL LSSCSCHLPQ AFASSMLIYS EKPLVGPLHK AGGADSQRLS
0701: VATKFKGQLF QLMQRLGNTT PHFIRCIKPN NVQSAGLYEQ GLVLQQLRCC GVLEVVRISR SGFPTRMFHH KFARRYGFLL LENIAAKDPL SVSVAILHQF
0801: NILPEMYQVG YTKLFFRTGQ IGVLEDTRNR TLHGILRLQS YFRGHQARCR LKELKTGITI LQSFVRGEKM RKEYTELLQR HRASAAIQSH VKRRIASQQY
0901: KATVDASAVI QSAIRGELVR RCAGDIGWLS SGGTKRNESD EVLVKASYLS DLQRRVLRTE AALREKEEEN DILRQRVQQY DNRWSEYETK MKSMEEIWQK
1001: QMKSLQSSLS IAKKSLEVED SARNSDASVN ASDATDLDSG GSHYQMGHGR SRSVGVGLSV ISRLAEEFGQ RAQVFGDDRK FLMEVKSGQV EANLNPDREL
1101: RRLKQMFETW KKDYGGRLRE TKLILSKLGS EETGGSAEKV KMNWWGRLRS TRY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.