Factsheet for AT5G20470.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002304.1-P	Field mustard	cytosol	33.09	42.2
CDY16536	Canola	cytosol	32.91	40.76
CDX92461	Canola	cytosol	33.09	39.74
TraesCS3D01G058300.1	Wheat	cytosol	41.55	30.16
Os01t0584200-00	Rice	mitochondrion	36.15	30.13
HORVU3Hr1G011330.5	Barley	cytosol	41.37	30.07
TraesCS3B01G070600.1	Wheat	cytosol	41.37	29.99
TraesCS3A01G058100.1	Wheat	cytosol	41.55	29.17
Zm00001d011197_P007	Maize	cytosol	38.49	27.83
KXG32782	Sorghum	cytosol	38.31	27.73
AT5G20490.2	Thale cress	cytosol	43.17	15.68
AT1G54560.1	Thale cress	cytosol	39.21	14.26
AT1G08730.1	Thale cress	endoplasmic reticulum	38.49	13.91
AT1G17580.1	Thale cress	cytosol	36.51	13.36
AT4G28710.1	Thale cress	cytosol	33.45	12.27
AT1G04160.1	Thale cress	cytosol	31.47	11.67
AT4G33200.4	Thale cress	cytosol	31.3	11.42
AT2G20290.1	Thale cress	endoplasmic reticulum	30.22	11.25
AT5G43900.3	Thale cress	cytosol	31.47	11.18
AT2G31900.2	Thale cress	cytosol	30.4	10.85
AT1G04600.1	Thale cress	cytosol	28.42	9.13
AT2G33240.1	Thale cress	cytosol	28.24	8.87
AT3G58160.1	Thale cress	cytosol	10.61	4.75
AT1G50360.1	Thale cress	cytosol	8.09	3.9
AT3G19960.2	Thale cress	cytosol, plastid	7.73	3.66
AT5G54280.2	Thale cress	cytosol	7.91	3.61
AT4G27370.2	Thale cress	cytosol	6.83	3.35
PGSC0003DMT400064422	Potato	cytosol	1.26	1.89

Protein Annotations

MapMan:35.1	EntrezGene:832169	ProteinID:AED92849.1	ArrayExpress:AT5G20470	EnsemblPlantsGene:AT5G20470	RefSeq:AT5G20470
TAIR:AT5G20470	RefSeq:AT5G20470-TAIR-G	EnsemblPlants:AT5G20470.1	TAIR:AT5G20470.1	ncoils:Coil	InterPro:Dilute_dom
UniProt:F4K5I9	GO:GO:0005575	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:IPR002710
RefSeq:NP_197547.1	PFAM:PF01843	PFscan:PS51126	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM01132
TMHMM:TMhelix	UniParc:UPI0000162537	SEG:seg	:	:	:

Description

Myosin [Source:UniProtKB/TrEMBL;Acc:F4K5I9]

Coordinates

chr5:-:6916181..6920120

Molecular Weight (calculated)

63518.4 Da

IEP (calculated)

4.541

GRAVY (calculated)

-0.366

Length

556 amino acids

Sequence
(BLAST)

001: MHQDMVLLVR EPKPEFRLCL YIVFDFIQIL IFFFCLMFIQ TWLHSEQEAA KDLRKALSEA EARNLELATE LETVTRKLDQ LQESVQRFNE YLNMSLKMAA
101: RDTGALREAK DKLEKRVEEL TLRLQLETRQ RTDLEEAKTQ EYAKQQEALQ AMWLQVEEAN AVVVREREAA RKAIEEAPPV IKEIPVLVED TEKINSLTSE
201: VEALKAERQA AEHLEKAFSE TEARNSELAT ELENATRKAD QLHESVQRLE EKLSNSESEI QVLRQQALAI SGETKTTPED ILVKCISQNL GYNGDMPVAA
301: CVIYKCLLHW RSFELERTSV FDRIIETIGS AVEVLEDNEV LAYWLSNLAS LSLFLEQIIN AARSASTNDI NGKFGERKST RKCCSDCTLG KYQEKPKHNG
401: EYVKAGLAEL EQWCIEATDE YAGSAWDELR HIRQAVGFLV TYQKPKMSLA VITSFFPVLS IQQLYRISTN YWDEKYGTHS VSSDVIANMR VMMTEDSNNA
501: VSSSFLLDED DSIPFTVGDI TESMEQVNVN DIELPQLIRE NSSFSFLLTR KEASPS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.