Factsheet for Bra002304.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16536	Canola	cytosol	94.95	92.2
CDX92461	Canola	cytosol	96.1	90.5
AT5G20470.1	Thale cress	endoplasmic reticulum	42.2	33.09
Os01t0584200-00	Rice	mitochondrion	47.02	30.73
HORVU3Hr1G011330.5	Barley	cytosol	47.94	27.32
KXG32782	Sorghum	cytosol	47.71	27.08
TraesCS3B01G070600.1	Wheat	cytosol	47.48	26.99
Zm00001d011197_P007	Maize	cytosol	47.48	26.92
TraesCS3D01G058300.1	Wheat	cytosol	47.25	26.89
TraesCS3A01G058100.1	Wheat	cytosol	47.02	25.88
Bra020105.1-P	Field mustard	cytosol	55.28	15.78
Bra006561.1-P	Field mustard	cytosol	55.5	15.74
Bra030993.1-P	Field mustard	cytosol	48.17	13.91
Bra027968.1-P	Field mustard	cytosol	48.39	13.89
Bra030739.1-P	Field mustard	cytosol	49.08	13.78
Bra011053.1-P	Field mustard	cytosol	43.12	12.48
Bra032526.1-P	Field mustard	cytosol	41.05	11.9
Bra018605.1-P	Field mustard	cytosol	48.17	11.9
Bra011426.1-P	Field mustard	cytosol	40.37	11.6
Bra036688.1-P	Field mustard	cytosol	38.07	11.49
Bra037016.1-P	Field mustard	cytosol	38.99	11.29
Bra033704.1-P	Field mustard	cytosol, plastid	41.74	10.98
Bra036460.1-P	Field mustard	cytosol	37.39	10.95
Bra030576.1-P	Field mustard	cytosol	34.86	8.99
Bra027512.1-P	Field mustard	cytosol	24.54	8.7
Bra022871.1-P	Field mustard	cytosol	39.45	7.79
Bra031394.1-P	Field mustard	cytosol	5.5	3.55
Bra001768.1-P	Field mustard	cytosol	7.34	2.82
Bra035834.1-P	Field mustard	cytosol	7.34	2.78
Bra039641.1-P	Field mustard	cytosol	6.88	2.61
Bra018844.1-P	Field mustard	cytosol	6.88	2.6
Bra002998.1-P	Field mustard	cytosol, plastid	7.11	2.57
Bra022708.1-P	Field mustard	cytosol	6.42	2.31
Bra014582.1-P	Field mustard	cytosol	5.28	1.96
Bra003324.1-P	Field mustard	cytosol	5.28	1.87
Bra026355.1-P	Field mustard	cytosol	5.28	1.85
PGSC0003DMT400064422	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra002304.1	EnsemblPlants:Bra002304.1-P	EnsemblPlantsGene:Bra002304	InterPro:Dilute_dom	InterPro:IPR002710	PANTHER:PTHR13140
PANTHER:PTHR13140:SF510	PFAM:PF01843	PFscan:PS51126	SEG:seg	SMART:SM01132	UniParc:UPI0002544C18
UniProt:M4CDM3	MapMan:35.1	:	:	:	:

Description

AT5G20490 (E=4e-112) XIK, ATXIK, XI-17 | XIK; motor/ protein binding

Coordinates

chrA10:+:10400604..10403038

Molecular Weight (calculated)

48587.2 Da

IEP (calculated)

4.363

GRAVY (calculated)

0.032

Length

436 amino acids

Sequence
(BLAST)

001: MPTQEAPVDK VTSVLVKDTE KIISLTSEVE ALKLGVTQEN QELLVTCISE NLGFAGGNPV AACLIYKCLL HWRSFELEET NIFDRIIQTI ASAIEVPDNN
101: QVLAYWLSNS AMLLKLLQHT FTSAAIPASR GCMGGGVVSS LDRQMQVEAK YPATLFKQQL IGFLEKMYVM IRDSLKIEVF SLLRLCTQAP QAQENNVPQQ
201: DLNGHWESIV ERLSSYLNLM KANNVNSTIP GQKINHTNIL LHQSSALKQA CMFTSSNISF SFLSSILLSD DCCYFVNGEY VEAGLAKLKQ WCIEATDEYV
301: GSAWDELSHI RQAAGFLQAI IQKQEMTLDK ITRELCPVLS IRQLYRISAM YFDDIYDMSS VSSDVISSMM IRLIDDLTDG VRSDFLLEDD LSIPFTVEDL
401: SKSTEQGDVN DIDTLALIHE NPSFSFLLTC GEGSSS

Best Arabidopsis Sequence Match ( AT1G54560.1 )
(BLAST)

0001: MRNSGTPVNI IVGSHVWIED SDVAWIDGLV EKINGQDVEV QATNGKKITA KLSKIYPKDM EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE LNEIYTYTGN
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD

Arabidopsis Description

XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.