Factsheet for Bra030993.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009206.1-P
Bra018599.1-P
Bra028728.1-P
Bra030742.1-P
Bra030993.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17580.1	Bra018599.1-P	AT1G08800.1	23995081
AT1G17580.1	Bra030742.1-P	AT1G08800.1	23995081
AT1G17580.1	Bra030993.1-P	AT1G17580.1	18429938
AT1G17580.1	Bra009206.1-P	AT5G06560.1	23995081
AT1G17580.1	Bra028728.1-P	AT5G06560.1	23995081

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	99.93	99.54
AT1G17580.1	Thale cress	cytosol	89.14	88.55
Os01t0713900-01	Rice	cytosol	18.68	75.81
Os05t0537200-01	Rice	cytosol, plasma membrane	18.01	73.12
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	74.24	71.95
GSMUA_Achr8P26250_001	Banana	cytosol	72.52	71.52
GSMUA_Achr5P09720_001	Banana	cytosol	72.85	70.38
Zm00001d044303_P003	Maize	plasma membrane	71.13	70.24
EES03165	Sorghum	cytosol	71.06	70.18
Bra020105.1-P	Field mustard	cytosol	70.86	70.07
Bra006561.1-P	Field mustard	cytosol	71.26	70.01
Zm00001d038844_P001	Maize	cytosol	29.14	69.84
TraesCS3A01G209500.1	Wheat	cytosol	70.4	69.75
HORVU3Hr1G050290.1	Barley	cytosol	70.6	69.72
Os03t0686300-00	Rice	plasma membrane	71.19	69.49
TraesCS3B01G239700.1	Wheat	cytosol, golgi	70.26	69.39
TraesCS3D01G212400.3	Wheat	cytosol	70.2	69.33
GSMUA_AchrUn_...	Banana	cytosol	40.6	68.8
Bra027968.1-P	Field mustard	cytosol	66.62	66.23
Bra030739.1-P	Field mustard	cytosol	64.5	62.72
Bra011053.1-P	Field mustard	cytosol	59.8	59.96
Bra027512.1-P	Field mustard	cytosol	47.88	58.78
Bra032526.1-P	Field mustard	cytosol	58.54	58.78
Bra036688.1-P	Field mustard	cytosol	54.44	56.89
Bra018605.1-P	Field mustard	cytosol	65.83	56.32
Bra014582.1-P	Field mustard	cytosol	43.58	56.0
Bra033704.1-P	Field mustard	cytosol, plastid	60.4	55.01
Bra036460.1-P	Field mustard	cytosol	53.97	54.77
Bra011426.1-P	Field mustard	cytosol	54.7	54.45
Bra003324.1-P	Field mustard	cytosol	43.31	53.08
Bra037016.1-P	Field mustard	cytosol	52.58	52.72
Os05t0537300-01	Rice	cytosol, mitochondrion, peroxisome	11.46	48.19
Bra002304.1-P	Field mustard	cytosol	13.91	48.17
Bra030576.1-P	Field mustard	cytosol	53.38	47.66
Bra022871.1-P	Field mustard	cytosol	59.87	40.92
HORVU1Hr1G080240.9	Barley	cytosol	58.15	40.89
TraesCS1B01G375000.1	Wheat	cytosol	57.88	40.8
TraesCS1D01G363400.1	Wheat	cytosol	57.75	40.58
TraesCS1A01G358500.1	Wheat	cytosol	55.23	40.04
OQU78360	Sorghum	cytosol	55.43	38.93
TraesCS3A01G248800.7	Wheat	cytosol	61.32	38.73
TraesCS3B01G277500.1	Wheat	cytosol	60.93	38.53
TraesCS3D01G248700.2	Wheat	cytosol	60.79	38.49
OQU87414	Sorghum	cytosol	60.73	38.42
Zm00001d011713_P003	Maize	endoplasmic reticulum	57.28	36.58
Bra001768.1-P	Field mustard	cytosol	26.09	34.68
Bra018844.1-P	Field mustard	cytosol	26.36	34.55
Bra035834.1-P	Field mustard	cytosol	26.16	34.29
Bra039641.1-P	Field mustard	cytosol	26.03	34.23
Zm00001d043667_P003	Maize	endoplasmic reticulum	45.23	34.17
Bra022708.1-P	Field mustard	cytosol	26.56	33.11
Bra002998.1-P	Field mustard	cytosol, plastid	25.83	32.37
Bra031394.1-P	Field mustard	cytosol	14.44	32.25
Zm00001d038845_P002	Maize	nucleus	28.34	30.27
Bra026355.1-P	Field mustard	cytosol	23.58	28.62
HORVU3Hr1G067400.2	Barley	cytosol	35.23	28.34

Protein Annotations

Gene3D:1.10.10.820	Gene3D:1.20.120.720	Gene3D:1.20.5.190	Gene3D:1.20.58.530	MapMan:20.2.4.1	Gene3D:3.30.70.3240
Gene3D:3.40.850.10	EnsemblPlantsGene:Bra030993	EnsemblPlants:Bra030993.1	EnsemblPlants:Bra030993.1-P	ncoils:Coil	InterPro:Dilute_dom
GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003774	GO:GO:0003777	GO:GO:0003779
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005856	GO:GO:0007015	GO:GO:0007018	GO:GO:0007275	GO:GO:0008017
GO:GO:0008150	GO:GO:0009653	GO:GO:0009791	GO:GO:0009826	GO:GO:0009908	GO:GO:0009987
GO:GO:0010090	GO:GO:0010154	GO:GO:0016043	GO:GO:0016049	GO:GO:0016459	GO:GO:0016787
GO:GO:0030154	GO:GO:0040007	GO:GO:0042802	GO:GO:0048467	GO:GO:0051301	GO:GO:0051645
GO:GO:0051646	GO:GO:0060151	GO:GO:0090436	InterPro:IPR000048	InterPro:IPR001609	InterPro:IPR002710
InterPro:IPR004009	InterPro:IPR036961	InterPro:IQ_motif_EF-hand-BS	InterPro:Kinesin_motor_dom_sf	UniProt:M4EQC2	InterPro:MYSc_Myo11
InterPro:MyosinXI_CBD	InterPro:Myosin_N	InterPro:Myosin_head_motor_dom	InterPro:P-loop_NTPase	PFAM:PF00063	PFAM:PF00612
PFAM:PF01843	PFAM:PF02736	PRINTS:PR00193	PFscan:PS50096	PFscan:PS51126	PFscan:PS51456
PFscan:PS51844	PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	SMART:SM00015	SMART:SM00242	SMART:SM01132
SUPFAM:SSF52540	UniParc:UPI0002542B50	SEG:seg	:	:	:

Description

AT1G17580 (E=0.0) MYA1, ATMYA1, XI-1 | MYA1 (MYOSIN 1); motor/ protein binding

Coordinates

chrA09:-:33028823..33037681

Molecular Weight (calculated)

171746.0 Da

IEP (calculated)

8.357

GRAVY (calculated)

-0.355

Length

1510 amino acids

Sequence
(BLAST)

0001: MQAAPVIIVG SHVWVEDPHL AWIDGQVTRI DGQNIHVRTK KGKTVVTSVY FPKDTEASPG GVDDMTKLSY LHEPGVLQNL ETRYELNHIY TYTGNILIAV
0101: NPFQRLPHLY ATDMMEQYKG IGLGELSPHV FAIGDAAYRA MINEGKSNSI LVSGESGAGK TETTKMLMRY LAFLGGRSGV EGRTVEQQVL ESNPVLEAFG
0201: NAKTLRNNNS SRFGKFVEIQ FDKHGRISGA AIRTYLLERS RVCQISDPER NYHCFYLLCA APPEDIKKYK LGNPQSFHYL NQSSCYELDG VDDASEYLET
0301: RRAMDVVGIS NEEQEAIFRV VAAILHLGNI DFGLGEEIDS SVIKDENSRF HLNLAAELLM CNAQSLEDAL IRRVMVTPEE IITKTLDPDN AIASRDTLAK
0401: TIYSHLFDWI VNKINTSIGQ DPRSKSIIGV LDIYGFESFK CNSFEQFCIN FTNEKLQQHF NQHVFKMEQE EYTKEEIDWS YIEFIDNQDV LDLIEKKPGG
0501: IISLLDEACM FPKSTHETFS NKLFQTFKGH ERFSKPKLSQ TDFTISHYAG EVTYQSNHFI DKNKDYIVAE HQALFTASNC SFVAGLFHAL HEDSSRSSKF
0601: SSIGSRFKQQ LHSLMETLNG TEPHYIRCIK PNNILKPGIF ENFNVIHQLR CGGVLEAIRI SCAGYPTRLA FYDFLERFGL LAPEVLDGNY DDEVACQMIL
0701: DKKGLRDYQV GKTKIFLRAG QMAELDARRA EVLGNAARVI QRQFRTWIGR KKFRSIRNAA IVLQSFLRGE IARTVHKKLI IEAAALRFQK NFRRYIARKS
0801: FVTNRSAAIV LQTGFKGMIA RNEFRLRRQT KAAIVIQAHW RGQRAYAYYI RLKKAAIVTQ CAWRCRLARR ELRMLKLAAR ETGALKDAKD KLEKRVEELT
0901: WRLQLEKRLR TDLEEAKVQE VAKLQEALHT MRSQLKEATV MALKEQEAAR MANEEASSVK KEPVVVEDTA KIKSLSNEIE KLKGILSSET HRADEATQAY
1001: RSALVQNEEL SKRLDEAGKK INQLQDSVQR FQEKVSNLES ENKVLRQQSL ALSPASRALA LRPKTTIVQM QRTPERFNFS NGETKQVQEP ETEDRPQKSL
1101: NQKQLENQEL LLKSISEDIG FSEGKPVAAC LIYKCLIHWR SFEVERTNIF NRIIETIASA IEMQENDDVL CYWLSNSATL LMLLERTLKA GNIPPSRHRA
1201: MSTSLFGRVS QVSFIGSPQS VGFPFMNGRA IGGGLDELRQ VEAKYPALLF KQQLTAYLEK IYGVIRDRMK REIAPLLAVC IQAPRQPRSG LIKGRSHNNF
1301: EAQKALSAHW QSIVTCLNGH LRTMRANYVP SLLISKVFGQ IFSFINVQLF NSLVLRRECC SFSNGEYVKT GLAELEKWCH DATEEFAGSA WDELKHIRQA
1401: VGFLVIHQKP KKSLDEITTE LCPVLTVQQL YRISTMYSDD KYGTHSVMAS MRQTVSEDTN KSFLLDDDSS IPFSLEDISK SMPNVEVAEI DPPPLIRQNT
1501: SFMFLLERSD

Best Arabidopsis Sequence Match ( AT1G17580.1 )
(BLAST)

0001: MAAPVIIVGS HVWVEDPHLA WIDGEVTRID GINVHVKTKK GKTVVTNVYF PKDTEAPSGG VDDMTKLSYL HEPGVLRNLE TRYELNEIYT YTGNILIAVN
0101: PFQRLPHIYE TDMMEQYKGI ALGELSPHVF AIGDAAYRAM INEGKNNSIL VSGESGAGKT ETTKMLMRYL AFLGGRSGVE GRTVEQQVLE SNPVLEAFGN
0201: AKTLRNNNSS RFGKFVEIQF DKNGRISGAA IRTYLLERSR VCQISDPERN YHCFYLLCAA PPEDIKKYKL ENPHKFHYLN QSSCYKLDGV DDASEYLETR
0301: RAMDVVGISN EEQEAIFRVV AAILHLGNID FGKGEEIDSS VIKDKDSRSH LNMAAELLMC NAQSLEDALI RRVMVTPEEI ITRTLDPDNA IASRDTLAKT
0401: IYSHLFDWIV NKINTSIGQD PRSKSIIGVL DIYGFESFKC NSFEQFCINF TNEKLQQHFN QHVFKMEQEE YTKEEIAWSY IEFIDNQDVL ELIEKKPGGI
0501: ISLLDEACMF PKSTHETFSQ KLFQTFKEHE RFAKPKLSRT DFTISHYAGE VTYQSNHFID KNKDYIVAEH QALFTASNCK FVAGLFHALH EDSSRSSKFS
0601: SIGSRFKQQL HSLMESLNGT EPHYIRCIKP NNVLKPGIFE NFNVIHQLRC GGVLEAIRIS CAGYPTRLAF YDFLDRFGLL APEVLEGNYD DKVACQMILD
0701: KKSLTDYQIG KTKIFLRAGQ MAELDARRAE VLGNAARVIQ RQFRTCMARK NYRSIRNAAI VLQSFLRGEI ARAVHKKLRI EAAALRVQKN FRRYVDRKSF
0801: VTTRSSTIVL QTGLRAMIAR SEFRLRRQRK AAIVLQAHWR GRQAFSYYTR LQKAAIVTQC AWRCRLARRE LRMLKMAARD TGALKDAKNK LEQRVEELSL
0901: RLHLEKRLRT DLEEAKVQEV AKLQEALHTM RLQLKETTAM VVKEQEAARV AIEEASSVNK EPVVVEDTEK IDSLSNEIDR LKGLLSSETH KADEAQHAYQ
1001: SALVQNEELC KKLEEAGRKI DQLQDSVQRF QEKVFSLESE NKVLRQQTLT ISPTTRALAL RPKTTIIQRT PEKDTFSNGE TTQLQEPETE DRPQKSLNQK
1101: QQENQELLLK SISEDIGFSE GKPVAACLIY KCLIHWRSFE VERTSIFNRI IETIASAIEM QENSDVLCYW LSNSATLLMF LQRTLKAGAT GSITTPRRRG
1201: MPSSLFGRVS QSFRGSPQSA GFPFMTGRAI GGGLDELRQV EAKYPALLFK QQLTAFLEKI YGMIRDKMKK EISPLLASCI QVPRTPRSGL VKGRSQNTQN
1301: NVVAPKPMIA HWQNIVTCLN GHLRTMRANY VPSLLISKVF GQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KTGLAELEKW CHDATEEFVG SAWDELKHIR
1401: QAVGFLVIHQ KPKKSLKEIT TELCPVLSIQ QLYRISTMYW DDKYGTHSVS TEVIATMRAE VSDVSKSAIS NSFLLDDDSS IPFSLDDISK SMQNVEVAEV
1501: DPPPLIRQNS NFMFLLERSD

Arabidopsis Description

XI-1Myosin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q39160]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.