Factsheet for Os05t0537300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0713900-01
Os03t0164800-00
Os03t0650800-00
Os03t0686300-00
Os03t0799200-01
Os05t0537200-01
Os05t0537300-01
Os10t0414800-01
Os12t0488700-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17580.1	Os03t0164800-00	AT1G08800.1	23995081
AT1G17580.1	Os03t0799200-01	AT1G08800.1	23995081
AT1G17580.1	Os10t0414800-01	AT1G08800.1	23995081
AT1G17580.1	Os01t0713900-01	AT1G17580.1	18429938
AT1G17580.1	Os03t0686300-00	AT1G17580.1	18429938
AT1G17580.1	Os05t0537200-01	AT1G17580.1	18429938
AT1G17580.1	Os05t0537300-01	AT1G17580.1	18429938
AT1G17580.1	Os03t0650800-00	AT5G06560.1	23995081
AT1G17580.1	Os12t0488700-00	AT5G06560.1	23995081

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0545000-01	Rice	cytosol, nucleus	9.75	37.63
Os10t0395100-01	Rice	cytosol	40.39	30.15
Os01t0584200-00	Rice	mitochondrion	45.4	24.44
Os02t0777700-00	Rice	cytosol	41.5	20.44
Os10t0339400-01	Rice	cytosol	40.95	20.16
Zm00001d038845_P002	Maize	nucleus	73.82	18.74
TraesCS1A01G358500.1	Wheat	cytosol	78.83	13.59
HORVU1Hr1G080240.9	Barley	cytosol	79.11	13.23
TraesCS1B01G375000.1	Wheat	cytosol	78.55	13.17
TraesCS1D01G363400.1	Wheat	cytosol	78.55	13.12
Os03t0686300-00	Rice	plasma membrane	56.27	13.06
GSMUA_Achr8P26250_001	Banana	cytosol	54.87	12.87
Os02t0816900-01	Rice	cytosol, plasma membrane	45.13	12.77
VIT_11s0016g01710.t01	Wine grape	cytosol	51.81	12.24
Os06t0488200-01	Rice	cytosol, plasma membrane	52.09	12.23
KRH19248	Soybean	cytosol	52.09	12.22
KRH02661	Soybean	cytosol	52.09	12.22
Solyc07g041150.2.1	Tomato	nucleus	51.81	12.16
PGSC0003DMT400053991	Potato	cytosol	51.53	12.1
GSMUA_Achr5P09720_001	Banana	cytosol	52.65	12.09
AT5G20490.2	Thale cress	cytosol	51.53	12.08
CDX70927	Canola	cytosol	51.25	11.83
Bra006561.1-P	Field mustard	cytosol	50.42	11.78
AT1G17580.1	Thale cress	cytosol	49.58	11.71
CDY51846	Canola	cytosol	50.7	11.51
Bra030993.1-P	Field mustard	cytosol	48.19	11.46
CDY21744	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.19	11.41
CDY66597	Canola	cytosol	48.19	11.37
Bra020105.1-P	Field mustard	cytosol	47.91	11.26
CDY45087	Canola	cytosol	47.91	11.1
VIT_09s0002g01910.t01	Wine grape	cytosol, endoplasmic reticulum, nucleus	46.24	10.65
OQU78360	Sorghum	cytosol	61.28	10.23
CDX81833	Canola	cytosol	39.0	9.56
Os03t0747900-00	Rice	cytosol, plasma membrane	30.64	7.57
Os10t0488800-01	Rice	cytosol	5.29	2.0
Os07t0562800-01	Rice	plasma membrane	5.85	1.68
Os05t0537200-01	Rice	cytosol, plasma membrane	0.84	0.81
Os01t0713900-01	Rice	cytosol	0.84	0.81
Zm00001d038844_P001	Maize	cytosol	1.39	0.79
GSMUA_AchrUn_...	Banana	cytosol	1.67	0.67
Os03t0860700-00	Rice	cytosol, plasma membrane	1.11	0.45
Os10t0395150-00	Rice	plasma membrane	0.56	0.37
Os03t0747800-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.1	ProteinID:BAF18082.1	ProteinID:BAS95090.1	InterPro:Dilute_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003774	GO:GO:0003777	GO:GO:0003779	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005856	GO:GO:0007015
GO:GO:0007018	GO:GO:0008017	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	GO:GO:0016459
GO:GO:0016787	InterPro:IPR002710	EnsemblPlantsGene:Os05g0537300	EnsemblPlants:Os05t0537300-01	PFAM:PF01843	PFscan:PS51126
PANTHER:PTHR13140	PANTHER:PTHR13140:SF510	UniProt:Q0DGE1	SMART:SM01132	UniParc:UPI0000E125B4	:

Description

Similar to Unconventional myosin heavy chain. (Os05t0537300-01)

Coordinates

chr5:+:26701863..26705017

Molecular Weight (calculated)

40947.0 Da

IEP (calculated)

7.125

GRAVY (calculated)

-0.203

Length

359 amino acids

Sequence
(BLAST)

001: HSSYFKAQHD TRSLAYWLSN LSTLSVLLQL SFKTTRAAIS TPHRRRFSYE RIFQASQTSN SGLAYFSAQP VDGPSGLQQI DAKYPALLFK QQLVDLIEKV
101: YGMISDKVKK ELNPLLELCI QDPRTSHSNQ AKASLSSASH LGQQSQLTHW LGIVKILNNC LHLLRANHVP SILIHKLLTQ IFSMVNVQLF NRLLLRRECC
201: SFSNGEYIRA GLTQIKHWCN DVNQEFADSA WEALRHIRQA VDFLVISLKP IRTWSEICDD VCPALSLQQL ERIVGMYWDD MNGTNIISAE FTSSMRTMMK
301: EESNNATSFS VLLDDDSSIP FSLEDIAKSM PTIEETTEND LLPFVRENQS FAFILHRRD

Best Arabidopsis Sequence Match ( AT1G54560.1 )
(BLAST)

0001: MRNSGTPVNI IVGSHVWIED SDVAWIDGLV EKINGQDVEV QATNGKKITA KLSKIYPKDM EAPAGGVDDM TKLSYLHEPG VLQNLKIRYE LNEIYTYTGN
0101: ILIAINPFQR LPHIYDAHMM QQYKGAPFGE LSPHVFAVAD VAYRAMINEG KSNSILVSGE SGAGKTETTK MLMRYLAYLG GRAVTEGRTV EQQVLESNPV
0201: LEAFGNAKTV RNNNSSRFGK FVEIQFDKQG RISGAAVRTY LLERSRVCQI SDPERNYHCF YLLCAAPQEE LEKYKLGHPK TFHYLNQSKC FELVGISDAH
0301: DYIATRRAMD IVGMSEKEQE AIFRVVAAIL HLGNVEFTKG KEVDSSVPKD DKSKFHLNTV AELLMCDVKA LEDALCKRVM VTPEEVIKRS LDPQSALISR
0401: DGLAKTIYSR LFDWLVEKIN VSIGQDATSR SLIGVLDIYG FESFKTNSFE QFCINFTNEK LQQHFNQHVF KMEQEEYTKE AIDWSYIEFV DNQDVLDLIE
0501: KKPGGIVALL DEACMFPKST HETFANKLYQ TFKTHKRFIK PKLSRTDFAV AHYAGEVQYQ SDLFLDKNKD YVIPEHQDLL GASKCPFVVG LFPPLPEETS
0601: KSSKFSSIGS RFKLQLQQLM ETLNSTEPHY IRCVKPNNLL KPAVFENVNI MQQLRCGGVL EAIRISCAGY PTRKPFFEFI NRFGLLYPRA LEGNYEEKAA
0701: AQKILDNIGL KGYQVGKTKV FLRAGQMAEL DARRTMVLSA AAKKIQRRIR THQAQRRFIL LRKATISLQA LCRGRLSSKI FDNLRRQAAA VKIQKNARRL
0801: HSRKSYKNLH VAALVVQTGL RAMAAHKQFR FRKQTKAATT IQAQFRCHRA TLYFKKLKKG VILSQTRWRG KLARRELRQL KMASRETGAL KEAKDMLEKK
0901: VEELTYRAQL EKRSRVDLEE EKNQEIKKLQ SSLEEMRKKV DETNGLLVKE REAAKKAIEE APPVVTETQV LVEDTQKIEA LTEEVEGLKA NLEQEKQRAD
1001: DATRKFDEAQ ESSEDRKKKL EDTEKKAQQL QESVTRLEEK CNNLESENKV LRQQAVSIAP NKFLSGRSRS ILQRGSESGH LSVDARPSLD LHSHSINRRD
1101: LSEVDDKPQK SLNEKQQENQ ELLIRCIVQH LGFQGKRPVT ACIIYKCLLQ WRSFEVERTS VFDRIIQTIG QAIETQDNNN ILAYWLSNAS TLLLLLQRTL
1201: KASGAAGMAP QRRRSSSATL FGRMTQSFRG TPQGVNLAMI NGGVDTLRQV EAKYPALLFK QQLTAYVEKI YGMIRDNLKK EISPLLGLCI QAPRTSRASL
1301: VKGASRSVGN TAAQQALIAH WQGIVKSLTN FLNNLKSNHV PPFLVRKVFT QIFSFINVQL FNSLLLRREC CSFSNGEYVK AGLAELEHWC YNATDEYAGS
1401: SWDELKHIRQ AIGFLVIHQK PKKTLDEISH ELCPVLSIQQ LYRISTMYWD DKYGTHSVSP DVIANMRVLM TEDSNNAVSN SFLLDDDSSI PFSVDDLSKS
1501: MERIEIGDVE PPPLIRENSG FSFLLPCSD

Arabidopsis Description

XI-EMyosin-11 [Source:UniProtKB/Swiss-Prot;Acc:F4HWY6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.