Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G363400.1 | Wheat | cytosol | 96.36 | 96.04 |
| TraesCS1A01G358500.1 | Wheat | cytosol | 93.09 | 95.73 |
| HORVU1Hr1G080240.9 | Barley | cytosol | 94.07 | 93.85 |
| Os05t0537200-01 | Rice | cytosol, plasma membrane | 15.5 | 89.25 |
| Zm00001d038844_P001 | Maize | cytosol | 25.68 | 87.3 |
| Os05t0537300-01 | Rice | cytosol, mitochondrion, peroxisome | 13.17 | 78.55 |
| OQU78360 | Sorghum | cytosol | 75.07 | 74.79 |
| Zm00001d038845_P002 | Maize | nucleus | 47.34 | 71.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.66 | 64.09 |
| TraesCS3B01G277500.1 | Wheat | cytosol | 71.38 | 64.03 |
| GSMUA_Achr8P26250_001 | Banana | cytosol | 44.44 | 62.18 |
| TraesCS3B01G239700.1 | Wheat | cytosol, golgi | 43.88 | 61.48 |
| KRH19248 | Soybean | cytosol | 43.65 | 61.11 |
| GSMUA_Achr5P09720_001 | Banana | cytosol | 44.3 | 60.72 |
| KRH02661 | Soybean | cytosol | 43.32 | 60.65 |
| VIT_11s0016g01710.t01 | Wine grape | cytosol | 42.95 | 60.57 |
| Solyc07g041150.2.1 | Tomato | nucleus | 43.14 | 60.43 |
| PGSC0003DMT400053991 | Potato | cytosol | 42.95 | 60.17 |
| VIT_09s0002g01910.t01 | Wine grape | cytosol, endoplasmic reticulum, nucleus | 43.09 | 59.24 |
| AT5G20490.2 | Thale cress | cytosol | 42.25 | 59.11 |
| CDY66597 | Canola | cytosol | 41.92 | 59.0 |
| Bra020105.1-P | Field mustard | cytosol | 41.97 | 58.87 |
| Bra006561.1-P | Field mustard | cytosol | 42.2 | 58.82 |
| CDX70927 | Canola | cytosol | 42.34 | 58.29 |
| CDY45087 | Canola | cytosol | 41.92 | 57.97 |
| Bra030993.1-P | Field mustard | cytosol | 40.8 | 57.88 |
| AT1G17580.1 | Thale cress | cytosol | 40.99 | 57.76 |
| TraesCS7B01G094100.1 | Wheat | cytosol | 41.27 | 57.7 |
| CDY21744 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.8 | 57.65 |
| CDX81833 | Canola | cytosol | 39.36 | 57.54 |
| CDY51846 | Canola | cytosol | 42.25 | 57.24 |
| TraesCS5B01G391400.2 | Wheat | cytosol | 38.7 | 53.21 |
| TraesCS6B01G431400.1 | Wheat | cytosol | 37.44 | 53.11 |
| TraesCS1B01G183200.1 | Wheat | cytosol | 36.65 | 51.99 |
| TraesCS5B01G566200.1 | Wheat | cytosol | 34.73 | 50.03 |
| TraesCS6B01G367000.1 | Wheat | cytosol | 33.47 | 47.9 |
| TraesCS3B01G070600.1 | Wheat | cytosol | 11.06 | 30.9 |
| TraesCS1B01G179500.2 | Wheat | mitochondrion | 16.95 | 30.4 |
| TraesCS2B01G232300.1 | Wheat | cytosol, endoplasmic reticulum | 17.69 | 29.8 |
Protein Annotations
| Gene3D:1.10.10.820 | Gene3D:1.20.120.720 | Gene3D:1.20.5.190 | Gene3D:1.20.58.530 | MapMan:20.2.4.1 | Gene3D:3.30.70.3240 |
| Gene3D:3.40.850.10 | ncoils:Coil | InterPro:Dilute_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003774 |
| GO:GO:0003777 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0007018 | GO:GO:0008017 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016459 | GO:GO:0016787 | InterPro:IPR000048 | InterPro:IPR001609 | InterPro:IPR002710 |
| InterPro:IPR004009 | InterPro:IPR036961 | InterPro:IQ_motif_EF-hand-BS | InterPro:Kinesin_motor_dom_sf | InterPro:MYSc_Myo11 | InterPro:Myosin_N |
| InterPro:Myosin_head_motor_dom | InterPro:P-loop_NTPase | PFAM:PD936484 | PFAM:PF00063 | PFAM:PF01843 | PFAM:PF02736 |
| PRINTS:PR00193 | PFscan:PS50096 | PFscan:PS51126 | PFscan:PS51456 | PFscan:PS51844 | PANTHER:PTHR13140 |
| PANTHER:PTHR13140:SF510 | SMART:SM00015 | SMART:SM00242 | SMART:SM01132 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1B01G375000 |
| EnsemblPlants:TraesCS1B01G375000.1 | TIGR:cd01384 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:+:605912632..605932837
Molecular Weight (calculated)
244535.0 Da
IEP (calculated)
6.924
GRAVY (calculated)
-0.595
Length
2142 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGTLNIVVG SHVWLEDKDL AWIDGEVFRI EGLNAHVRTT NGKTVTASIS NIHPKDTEIL PDGIDDMTRL SYLHEPGVLD NLAVRYAKNI IYTYTGNILI
0101: AINPFQRLPH IAEPSTMEKY KGANFGELDP HVFALADVSY RQMMNEEKSN SILVSGESGA GKTETTKLLM RYLAFLGGRS KTGGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IHFDKSGKIS GAAIRTYLLE RSRVCQINSP ERNYHCFYFL CSAPSEDIKR YKLGDPSSFH YLNQSSCIKV DGMSDAEEYL
0301: ATRSAMNTVG ITEQEQEATF RVVAAVLHLG NINFVKGRDA DSSVVKDEKA KFHLNAAAEL LMCDREKLEN ALIKRKINTP EGVITTTVDP NSATVSRDGL
0401: AKQIYCRLFD WLVNRLNASI GQDAQSARLI GVLDIYGFES FKTNSFEQLC INFTNEKLQQ HFNQNVFKME QEEYNREQID WSYIEFVDNQ DVLDLIERKP
0501: GGIIALLDEA CMFPKCTHES FSQKLYEKFK NNKRFSKPKL SRTAFTIQHY AGEVTYQSDH FLDKNRDYVV VEHEELLNAS KCSFVSGLFP SAPEENTKSS
0601: KSSIANRFKG QLHELMETLS STEPHYIRCV KPNNLLKPAT FENINVLQQL RCSGVLEAIR ISCAGYPTRK LFHDFLQRFR ILAPEILKER NDDKVICRKI
0701: LDKTELQGYQ IGRTKVFLRA GQMAELDARR TEVRSKAARV IQSRYHTHVA RQKFLAIRDT SVSFQSIVRV ILACKRRAFL RNQVAALKVQ KSVRWYLAFK
0801: SYSTMRCAAI TLQAGLRAFG AYKEYVHRKQ RKASIHIQAR WRCHRDNSNY LKLKRSVLIY QCAWRRRIAR RELRKLKMAA RDTENLKVEK EKLEEHVEEL
0901: TSRLGLEMKL RADLENSKAG EISKLQAALR EMEHRVEEAT AVQESESAKR AVEEALAQER EKITILTNEV EGIKVLLSRE REENTATKND LAIAQERCED
1001: LNGKIEVADE NIKQLRDTVK RFEENVTELE SSLMTEKQHN EATRGELGEA HQRIEELLRQ VADADGKSTV LQSTVQRLEE SLTEREGTLL LERQESEAIK
1101: KSLAEARGEN EELVHKTEVA EKDIARFQNN IERLEEAART FETSLLAEKQ HSAAIMSQLA ETKEEIEELQ KKFTDANRTN DTLQDSLKRL EETAAARDAL
1201: HVAEKKEHGQ TKEALSKSQE RNSELLKKVD ESEKTINKLM ENVKRLEKHA TSRESLLLKT KQNQDGTTKA LAEAEKRNQE LMKSSEDSDK KISLLEDSVN
1301: RLEECIAEKD SLLATERQEN NATKEELANA QKKTKELVNE LQHCQEISKR LEQDGTAKDA LLISEKQTHE ATKKTLTETL GRNEELIKKI QDSDKHSLQL
1401: QLTIERLQEN ASAKEALLLR EREQNNATMK VQEESQEKNS QLLKKFEDVD KKIDLLQGTI QRLGDHTEKD TLLLSERQEK DELKKALTET EYKNEELTIK
1501: IGETNKKIEH LQNSIHMLEQ DIVAKDASLE AEKQENDAIR KSLVEAQERN DELFMKIRDG EYKAHQLQDT VQKLQVDAIS RLSSFVLEKQ ESDAVKKALT
1601: EARGRNEDLI RRNEDLLDRN DDLIKKVEEL QETVQRLEGK SSNLEAENQT LRQHSIVSTP STAKSQASYS KISMIHRSQE NGHILNGNVP YAEMRSSFGT
1701: AETRPYMGSA PDLTIHRDYD TGEKMQRVLL SEAYQQPQDD QKLLLKYITQ HLGFSGSKPV AALLIYQYLL HSRSFEVTKT GVFDSILQAI NSATEAQHDT
1801: RSLAYWLSNL STLSVLLQRS FRTARTATSV PYRRKMSYDR IYQANQASGL AYLSGQLLDE PGASHQIDAK YPALLFKQQL VDLIEKVYGL LSDKLKKELN
1901: PLLELCIQDP RTSQAKASVS SAGLGQHNQL THWLGIVKIL NSYLYLLIAN HVPTILVHKL LTQIFSMVNV QLFNRLLLRR ECCSFSNGEH IRAGLAQLKH
2001: WCNDVAQEPA DSAWEALRHI RQAADFLVMS RKPMRTWREI RNEICPALSL QQLERIVGMY WDDMNGTNVL SAEFTSSMRV TLHEESNSLS SFSVLLDDDS
2101: SIPFSLDDIA KSMPNIEDTV ESDLMPFIRE NQSLALILQR RD
0101: AINPFQRLPH IAEPSTMEKY KGANFGELDP HVFALADVSY RQMMNEEKSN SILVSGESGA GKTETTKLLM RYLAFLGGRS KTGGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IHFDKSGKIS GAAIRTYLLE RSRVCQINSP ERNYHCFYFL CSAPSEDIKR YKLGDPSSFH YLNQSSCIKV DGMSDAEEYL
0301: ATRSAMNTVG ITEQEQEATF RVVAAVLHLG NINFVKGRDA DSSVVKDEKA KFHLNAAAEL LMCDREKLEN ALIKRKINTP EGVITTTVDP NSATVSRDGL
0401: AKQIYCRLFD WLVNRLNASI GQDAQSARLI GVLDIYGFES FKTNSFEQLC INFTNEKLQQ HFNQNVFKME QEEYNREQID WSYIEFVDNQ DVLDLIERKP
0501: GGIIALLDEA CMFPKCTHES FSQKLYEKFK NNKRFSKPKL SRTAFTIQHY AGEVTYQSDH FLDKNRDYVV VEHEELLNAS KCSFVSGLFP SAPEENTKSS
0601: KSSIANRFKG QLHELMETLS STEPHYIRCV KPNNLLKPAT FENINVLQQL RCSGVLEAIR ISCAGYPTRK LFHDFLQRFR ILAPEILKER NDDKVICRKI
0701: LDKTELQGYQ IGRTKVFLRA GQMAELDARR TEVRSKAARV IQSRYHTHVA RQKFLAIRDT SVSFQSIVRV ILACKRRAFL RNQVAALKVQ KSVRWYLAFK
0801: SYSTMRCAAI TLQAGLRAFG AYKEYVHRKQ RKASIHIQAR WRCHRDNSNY LKLKRSVLIY QCAWRRRIAR RELRKLKMAA RDTENLKVEK EKLEEHVEEL
0901: TSRLGLEMKL RADLENSKAG EISKLQAALR EMEHRVEEAT AVQESESAKR AVEEALAQER EKITILTNEV EGIKVLLSRE REENTATKND LAIAQERCED
1001: LNGKIEVADE NIKQLRDTVK RFEENVTELE SSLMTEKQHN EATRGELGEA HQRIEELLRQ VADADGKSTV LQSTVQRLEE SLTEREGTLL LERQESEAIK
1101: KSLAEARGEN EELVHKTEVA EKDIARFQNN IERLEEAART FETSLLAEKQ HSAAIMSQLA ETKEEIEELQ KKFTDANRTN DTLQDSLKRL EETAAARDAL
1201: HVAEKKEHGQ TKEALSKSQE RNSELLKKVD ESEKTINKLM ENVKRLEKHA TSRESLLLKT KQNQDGTTKA LAEAEKRNQE LMKSSEDSDK KISLLEDSVN
1301: RLEECIAEKD SLLATERQEN NATKEELANA QKKTKELVNE LQHCQEISKR LEQDGTAKDA LLISEKQTHE ATKKTLTETL GRNEELIKKI QDSDKHSLQL
1401: QLTIERLQEN ASAKEALLLR EREQNNATMK VQEESQEKNS QLLKKFEDVD KKIDLLQGTI QRLGDHTEKD TLLLSERQEK DELKKALTET EYKNEELTIK
1501: IGETNKKIEH LQNSIHMLEQ DIVAKDASLE AEKQENDAIR KSLVEAQERN DELFMKIRDG EYKAHQLQDT VQKLQVDAIS RLSSFVLEKQ ESDAVKKALT
1601: EARGRNEDLI RRNEDLLDRN DDLIKKVEEL QETVQRLEGK SSNLEAENQT LRQHSIVSTP STAKSQASYS KISMIHRSQE NGHILNGNVP YAEMRSSFGT
1701: AETRPYMGSA PDLTIHRDYD TGEKMQRVLL SEAYQQPQDD QKLLLKYITQ HLGFSGSKPV AALLIYQYLL HSRSFEVTKT GVFDSILQAI NSATEAQHDT
1801: RSLAYWLSNL STLSVLLQRS FRTARTATSV PYRRKMSYDR IYQANQASGL AYLSGQLLDE PGASHQIDAK YPALLFKQQL VDLIEKVYGL LSDKLKKELN
1901: PLLELCIQDP RTSQAKASVS SAGLGQHNQL THWLGIVKIL NSYLYLLIAN HVPTILVHKL LTQIFSMVNV QLFNRLLLRR ECCSFSNGEH IRAGLAQLKH
2001: WCNDVAQEPA DSAWEALRHI RQAADFLVMS RKPMRTWREI RNEICPALSL QQLERIVGMY WDDMNGTNVL SAEFTSSMRV TLHEESNSLS SFSVLLDDDS
2101: SIPFSLDDIA KSMPNIEDTV ESDLMPFIRE NQSLALILQR RD
0001: MGTPVNIIVG SHVWFEDPEV AWIDGEVEKI NGQEVVIQAT TGKKVTAKLS KIYPKDVEAP AGGVDDMTKL SYLHEPGVLQ NLKIRYELNE IYTYTGNILI
0101: AINPFQRLPH IYDAHMMQQY KGAPLGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEEIEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYL
0301: ATRRAMDIVG ISEKEQEAIF RVVAAILHIG NIDFTKGKEV DSSVPKDEKS KFHLKTAAEL LMCDLKALED ALCKRVMITP EEVIKRSLDP QSAVTSRDGL
0401: AKTVYSRLFD WLVDKINKSI GQDANSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NCTEPHYIRC VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG NFDEKVACQK
0701: ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR
0801: KSYKKLHVAS LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA KRELRKLKMA ARETGALKEA KDMLEKKVEE
0901: LTYRVQLEKR SRGDLEEAKT QEILKLKSSF EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE NEKQRADDAV
1001: RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE
1101: VEDKPQKSLN EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MSQSFRGAPP GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC IQAPRTSRAS
1301: LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG
1401: SSWDELKHIR QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS IPFSVDDLSK
1501: SMEKFEIADI EPPPLIRENS GFSFLLPVSE
0101: AINPFQRLPH IYDAHMMQQY KGAPLGELSP HVFAVADVAY RAMINEGKSN SILVSGESGA GKTETTKMLM RYLAYLGGRA VTEGRTVEQQ VLESNPVLEA
0201: FGNAKTVRNN NSSRFGKFVE IQFDKQGRIS GAAIRTYLLE RSRVCQISDP ERNYHCFYLL CAAPQEEIEK YKLGHPKTFH YLNQSKCFEL VGISDAHDYL
0301: ATRRAMDIVG ISEKEQEAIF RVVAAILHIG NIDFTKGKEV DSSVPKDEKS KFHLKTAAEL LMCDLKALED ALCKRVMITP EEVIKRSLDP QSAVTSRDGL
0401: AKTVYSRLFD WLVDKINKSI GQDANSRSLI GVLDIYGFES FKTNSFEQFC INFTNEKLQQ HFNQHVFKME QEEYTKEAID WSYIEFVDNQ DVLDLIEKKP
0501: GGIVALLDEA CMFPKSTHET FANKLYQTFK THKRFIKPKL SRTDFAVAHY AGEVLYQSEL FLDKNKDYVI PEHQDLLGAS KCPFVVGLFP PLPEETSKSS
0601: KFSSIGSRFK LQLQQLMETL NCTEPHYIRC VKPNNLLKPA IFENVNIMQQ LRCGGVLEAI RISCAGYPTR KPFFEFINRF GLLSPAALEG NFDEKVACQK
0701: ILDNMGLKGY QIGKTKVFLR AGQMAELDAR RAEVLSSAAK KIQRRIRTHQ AQKRFIVLRK ATISLQAICR GRLSCKHYDN LRREAAAVKI QKNGRRHYSR
0801: KSYKKLHVAS LVVQTGLRAM AARKQFRFRK QTKAATIVQA QWRCHRAISY YKKLKNGVVL SQTRWRGRLA KRELRKLKMA ARETGALKEA KDMLEKKVEE
0901: LTYRVQLEKR SRGDLEEAKT QEILKLKSSF EEMRKKVDET NALLLKEREA AKKAAEEAPP VIKETQILVE DTKKIELMTE ELESVKVTLE NEKQRADDAV
1001: RKFEEAQESL EDKKKKLEET EKKGQQLQES LTRMEEKCSN LESENKVLRQ QAVSMAPNKF LSGRSRSILQ RGSESGHLAV DARSNLDLHS HSINHRDPSE
1101: VEDKPQKSLN EKQQENQDLL IRSIVQHLGF QGNRPITACI IYKCLLQWRS FEVERTSVFD RIIQTIGHAI ETQDNNNTLA YWLSNTSTLL LLLQRTLKAS
1201: GAAGMAPQRR RSSSATLFGR MSQSFRGAPP GVNLAMINGA AGGGADTFRQ VEAKYPALLF KQQLTAYVEK IYGMIRDNLK KEISPLLGLC IQAPRTSRAS
1301: LVKGASRSVG NTAAQQALIA HWQGIVKSLT NFLNTLKSNN VPSFLVRKVF TQIFSFINVQ LFNSLLLRRE CCSFSNGEYV KAGLSELEHW CFKATNEYAG
1401: SSWDELKHIR QAIGFLVVHQ KPKKTLDEIS HDLCPVLSIQ QLYRISTMYW DDKYGTHSVS PDVIANMRVL MTEDSNNAVS NSFLLDDDSS IPFSVDDLSK
1501: SMEKFEIADI EPPPLIRENS GFSFLLPVSE
Arabidopsis Description
XI-CMyosin-9 [Source:UniProtKB/Swiss-Prot;Acc:F4HXP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.