Factsheet for TraesCS5D01G451800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 4
extracellular 2
vacuole 2
plasma membrane 2
golgi 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G448800.1	Wheat	mitochondrion	92.09	91.1
TraesCS5A01G444100.1	Wheat	plastid	90.54	88.62
EER93280	Sorghum	golgi, vacuole	44.19	39.69
Os03t0799200-01	Rice	golgi, vacuole	44.03	39.06
TraesCS1D01G135800.1	Wheat	cytosol, golgi, mitochondrion, plastid	21.86	22.63
VIT_07s0141g00860.t01	Wine grape	golgi	25.89	21.86
TraesCS3D01G309900.1	Wheat	golgi	28.53	21.15
VIT_14s0081g00320.t01	Wine grape	nucleus	23.72	21.05
KRH68762	Soybean	golgi, plasma membrane	27.75	20.72
KRG97006	Soybean	plastid	27.29	20.49
KRH19519	Soybean	golgi	26.67	20.12
TraesCS4D01G278300.1	Wheat	golgi, vacuole	23.26	19.92
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	25.58	19.16
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	25.58	18.11
CDY29652	Canola	endoplasmic reticulum	20.31	17.97
Bra021657.1-P	Field mustard	endoplasmic reticulum	20.0	17.39
CDY47125	Canola	endoplasmic reticulum, plasma membrane	19.38	17.34
CDY10753	Canola	endoplasmic reticulum, plasma membrane	19.07	17.3
KRH32143	Soybean	extracellular	20.62	17.27
CDY67896	Canola	endoplasmic reticulum, vacuole	20.16	17.04
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.95	16.93
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	17.83	16.79
KRH15931	Soybean	nucleus	11.78	16.74
TraesCS4D01G218100.3	Wheat	mitochondrion	21.86	16.73
CDX95032	Canola	endoplasmic reticulum, vacuole	24.19	16.3
Bra018599.1-P	Field mustard	extracellular, vacuole	24.19	16.28
CDX93536	Canola	extracellular, vacuole	24.19	16.18
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	18.91	16.05
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	26.2	14.68
TraesCS4D01G041500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	19.84	14.22
TraesCS2D01G272500.1	Wheat	plastid	10.54	14.02
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.96	13.47
AT1G08800.1	Thale cress	extracellular, vacuole	22.95	13.3
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	23.26	13.02
TraesCS1D01G145300.1	Wheat	cytosol	7.29	12.37
TraesCS5D01G410200.1	Wheat	nucleus	7.13	12.14
TraesCS7D01G282800.1	Wheat	nucleus	7.6	11.24
TraesCS5D01G380300.1	Wheat	cytosol	6.51	10.55

Protein Annotations

EnsemblPlants:TraesCS5D01G451800.1	EnsemblPlantsGene:TraesCS5D01G451800	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31448
PANTHER:PTHR31448:SF26	PFAM:PF04576	PFscan:PS51775	SEG:seg	TMHMM:TMhelix	MapMan:20.2.4.3

Description

No Description!

Coordinates

chr5D:-:499867929..499871170

Molecular Weight (calculated)

70668.0 Da

IEP (calculated)

4.463

GRAVY (calculated)

-0.787

Length

645 amino acids

Sequence
(BLAST)

001: MATTSSTAWG SHRQFSALLS SAVLEWVLIL LMLLEGLLSR LATAFARLCN LPPPCPACAR LDAVLGGARP GSSYRDLLCS SHRAEASSSR AFCHDGGMGI
101: GDVLRDRLAV DDEIDRAGYS ELRASDSESE LRRRSPEDAA AIDRLKEQLT LTQVQSGVPD RTHAAEDSRE PGSIEADIQS TDLPTKDEEP HTKVANGVLQ
201: SELMQVQSGK LHSEDPDNIQ TSDVSTKDEE PHTDTGDHNP EEDVWHDADD GEPSETEAAA DEPDPEFSDR ATTRQDSLRV HQHLKLLLSQ LSTSSSFRAP
301: DSPSVQEQQH EQAVLRNITR ALSLQRNYSG VSDGSVAGAE GEAEECGTVD ELKRRVELDR RSMALLWKEL EEERSASAVA TSQAMAMITR LQEEKAAMRT
401: EAAQYRRVME EQSAYDRDDA ERLAGVVREL EAEVEGYKAR LRDHEIVGEI RDHMRLLPCQ REGETGGVPG AAGEEFSGGG SEDDENARAW KQLRGLTDRL
501: HRLSNNSSGS VQEPEPTDVE QEEEGGGGKE EDTTEASVVG KRVRNGDNFT KWQHLQSIET TSKGSTHGHG HRGDDGGGEG DDTAALEEEI GELSRRLQAL
601: EADRSFLEHS VNSLRNGRDG EAVIHDIARS LRELRKTLGE DTMAS

Best Arabidopsis Sequence Match ( AT1G70750.1 )
(BLAST)

001: MAANKFATLI HRKTNRITLI LVYAFLEWSL IFFILLNSLF SYFILRFADY FGLKRPCLFC SRLDRFFDAS GKSPSHRDLL CDDHALQLHS KPVEESNCGF
101: GEFHNDLVHR GCCVEKISSS LCAPIESDFG NLDYPIGDEG QIYNGLKFPR SIFVFEEEKV GSVNLNDSQE ETEEKKVPQS HEKLEDDDVD EEFSCYVSSF
201: DCKNKEIATE KEEENRVDLP IEVETAESAP KNLEFYIDEE DCHLIPVEFY KPSEEVREIS DINGDFILDF GVEHDFTAAA ETEEISDFAS PGESKPEDAE
301: TNLVASEMEN DDEETDAEVS IGTEIPDHEQ IGDIPSHQLI PHHDDDDHEE ETLEFKTVTI ETKMPVLNIN EERILEAQGS MESSHSSLHN AMFHLEQRVS
401: VDGIECPEGV LTVDKLKFEL QEERKALHAL YEELEVERNA SAVAASETMA MINRLHEEKA AMQMEALQYQ RMMEEQAEFD QEALQLLNEL MVNREKENAE
501: LEKELEVYRK RMEEYEAKEK MGMLRRRLRD SSVDSYRNNG DSDENSNGEL QFKNVEGVTD WKYRENEMEN TPVDVVLRLD ECLDDYDGER LSILGRLKFL
601: EEKLTDLNNE EDDEEEAKTF ESNGSINGNE HIHGKETNGK HRVIKSKRLL PLFDAVDGEM ENGLSNGNHH ENGFDDSEKG ENVTIEEEVD ELYERLEALE
701: ADREFLRHCV GSLKKGDKGV HLLHEILQHL RDLRNIDLTR VRENGDMSL

Arabidopsis Description

MYOB2Myosin-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC4]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.