Factsheet for TraesCS5B01G448800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid, vacuole
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G451800.1	Wheat	endoplasmic reticulum	91.1	92.09
TraesCS5A01G444100.1	Wheat	plastid	86.96	86.04
EER93280	Sorghum	golgi, vacuole	42.94	39.0
Os03t0799200-01	Rice	golgi, vacuole	43.1	38.65
TraesCS1B01G153100.1	Wheat	cytosol, golgi, mitochondrion, plastid	21.78	22.79
VIT_07s0141g00860.t01	Wine grape	golgi	25.15	21.47
KRH68762	Soybean	golgi, plasma membrane	27.76	20.95
TraesCS3B01G343400.3	Wheat	golgi, mitochondrion	28.22	20.93
VIT_14s0081g00320.t01	Wine grape	nucleus	23.31	20.91
KRG97006	Soybean	plastid	27.15	20.61
KRH19519	Soybean	golgi	25.92	19.77
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	25.77	19.51
TraesCS4B01G279900.1	Wheat	golgi, vacuole	23.62	19.35
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	25.61	18.33
CDY29652	Canola	endoplasmic reticulum	20.4	18.24
Bra021657.1-P	Field mustard	endoplasmic reticulum	20.09	17.66
CDY10753	Canola	endoplasmic reticulum, plasma membrane	18.86	17.3
CDY47125	Canola	endoplasmic reticulum, plasma membrane	19.02	17.2
CDY67896	Canola	endoplasmic reticulum, vacuole	20.09	17.17
KRH32143	Soybean	extracellular	20.09	17.01
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.7	16.93
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	17.64	16.79
CDX95032	Canola	endoplasmic reticulum, vacuole	24.39	16.61
Bra018599.1-P	Field mustard	extracellular, vacuole	24.39	16.6
KRH15931	Soybean	nucleus	11.5	16.52
CDX93536	Canola	extracellular, vacuole	24.39	16.49
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	19.02	16.32
TraesCS4B01G217800.2	Wheat	mitochondrion	20.55	15.86
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	25.31	14.34
TraesCS4B01G044000.1	Wheat	plastid	19.48	14.11
TraesCS2B01G291300.1	Wheat	plastid	10.28	13.81
TraesCS1B01G165300.1	Wheat	plastid	9.97	13.57
AT1G08800.1	Thale cress	extracellular, vacuole	23.16	13.57
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	24.39	13.31
TraesCS5B01G373100.1	Wheat	nucleus	9.97	13.0
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	22.7	12.85
TraesCS5B01G405000.1	Wheat	nucleus	6.9	11.94
TraesCS7B01G199800.1	Wheat	nucleus	7.36	10.84

Protein Annotations

EnsemblPlants:TraesCS5B01G448800.1	EnsemblPlantsGene:TraesCS5B01G448800	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31448
PANTHER:PTHR31448:SF26	PFAM:PF04576	PFscan:PS51775	SEG:seg	TMHMM:TMhelix	MapMan:20.2.4.3

Description

No Description!

Coordinates

chr5B:-:621259658..621261713

Molecular Weight (calculated)

71116.6 Da

IEP (calculated)

4.484

GRAVY (calculated)

-0.747

Length

652 amino acids

Sequence
(BLAST)

001: MAPRARATGT AWGSHRQQLS ALLSSAVLEW VLILLMLLEG LLSYLATAFA RLCNLPPPCP ACARLDAVLG GARPGSSYRD LLCSSHRAEA FCHDGGGVGI
101: GEVCSGDVSG GRLAVDDGFD RAGYSELRTS DSESELRRRS PEDAAAIDRL KEQLTLTQVQ SGVPDRTHAA EDSRELGSII QTSELPTKDE ESHTKVADSV
201: LQSELTQVQS GKLHCEDPDS IQTSDLPTKD EEPHTDTGDD HNPEEDVWHN ATDTGEPSET KAAADEPDPE FSDRATTRQD SLRVHQHLKL LLSQLSTSSS
301: FRAPDSPSVQ EQQHEQAVLR NITRALSLQR NYSGVSDGSV AGAEGEAEEC GTVDELKRRV ELDRRSMALL WKELEEERSA SAVATSQAMA MITRLQEEKA
401: AMRTEAAQYR RVMEEQSAYD RDEADRLAGA VRELEAEVEG YKARLRDHEI VGEIRDHMRL LPCQTQGETG GVSGSGPAGE EFSGGGSEDD ENARAWKQLR
501: GLTDRLHRLS NNSSGIVQEP EPTDVEEEEE DGDGGKEEDT TEASVVGKRV RNGDNFTKWQ HLQSIETTSK GSTHGHGHRG DDGGGEGDDT AALEEEIGEL
601: SRRLQALEAD RSFLEHSVNS LRNGRDGEAV VHDIARSLRV LRRTLGEDTM AT

Best Arabidopsis Sequence Match ( AT1G70750.1 )
(BLAST)

001: MAANKFATLI HRKTNRITLI LVYAFLEWSL IFFILLNSLF SYFILRFADY FGLKRPCLFC SRLDRFFDAS GKSPSHRDLL CDDHALQLHS KPVEESNCGF
101: GEFHNDLVHR GCCVEKISSS LCAPIESDFG NLDYPIGDEG QIYNGLKFPR SIFVFEEEKV GSVNLNDSQE ETEEKKVPQS HEKLEDDDVD EEFSCYVSSF
201: DCKNKEIATE KEEENRVDLP IEVETAESAP KNLEFYIDEE DCHLIPVEFY KPSEEVREIS DINGDFILDF GVEHDFTAAA ETEEISDFAS PGESKPEDAE
301: TNLVASEMEN DDEETDAEVS IGTEIPDHEQ IGDIPSHQLI PHHDDDDHEE ETLEFKTVTI ETKMPVLNIN EERILEAQGS MESSHSSLHN AMFHLEQRVS
401: VDGIECPEGV LTVDKLKFEL QEERKALHAL YEELEVERNA SAVAASETMA MINRLHEEKA AMQMEALQYQ RMMEEQAEFD QEALQLLNEL MVNREKENAE
501: LEKELEVYRK RMEEYEAKEK MGMLRRRLRD SSVDSYRNNG DSDENSNGEL QFKNVEGVTD WKYRENEMEN TPVDVVLRLD ECLDDYDGER LSILGRLKFL
601: EEKLTDLNNE EDDEEEAKTF ESNGSINGNE HIHGKETNGK HRVIKSKRLL PLFDAVDGEM ENGLSNGNHH ENGFDDSEKG ENVTIEEEVD ELYERLEALE
701: ADREFLRHCV GSLKKGDKGV HLLHEILQHL RDLRNIDLTR VRENGDMSL

Arabidopsis Description

MYOB2Myosin-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAC4]
SUBAcon: [mitochondrion,endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.