Factsheet for AT1G08800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95032	Canola	endoplasmic reticulum, vacuole	57.86	67.29
CDX93536	Canola	extracellular, vacuole	57.95	66.91
Bra018599.1-P	Field mustard	extracellular, vacuole	57.41	66.7
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	50.04	63.73
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	54.9	53.04
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	17.79	33.73
GSMUA_AchrUn_...	Banana	golgi, vacuole	18.6	32.45
GSMUA_Achr4P17820_001	Banana	golgi	21.2	32.02
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	21.29	29.77
KXG38537	Sorghum	golgi, plasma membrane, plastid	14.11	27.94
EER93280	Sorghum	golgi, vacuole	17.97	27.86
Os10t0414800-01	Rice	mitochondrion, nucleus, plastid, vacuole	14.65	27.26
AT1G18990.1	Thale cress	endoplasmic reticulum, plasma membrane	12.76	27.1
TraesCS1D01G135800.1	Wheat	cytosol, golgi, mitochondrion, plastid	15.0	26.81
HORVU1Hr1G035080.2	Barley	cytosol, golgi, mitochondrion, plastid	15.0	26.76
TraesCS1B01G153100.1	Wheat	cytosol, golgi, mitochondrion, plastid	14.82	26.48
Os03t0164800-00	Rice	golgi, mitochondrion	16.71	25.55
AT1G74830.1	Thale cress	extracellular, golgi, vacuole	12.4	25.46
Os03t0799200-01	Rice	golgi, vacuole	16.44	25.17
EER92810	Sorghum	mitochondrion	17.61	24.81
TraesCS3A01G321400.1	Wheat	golgi	19.41	24.71
TraesCS3B01G343400.3	Wheat	golgi, mitochondrion	19.41	24.57
TraesCS3D01G309900.1	Wheat	golgi	19.14	24.48
HORVU3Hr1G075790.2	Barley	golgi, mitochondrion	19.14	24.2
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	16.08	23.55
Zm00001d048439_P007	Maize	golgi, mitochondrion, nucleus, plastid	16.89	23.5
AT5G16720.1	Thale cress	endoplasmic reticulum, golgi, vacuole	14.2	23.41
Zm00001d032962_P003	Maize	endoplasmic reticulum, nucleus, plasma membrane	12.94	23.34
TraesCS5B01G448800.1	Wheat	mitochondrion	13.57	23.16
EES01549	Sorghum	golgi	18.78	23.07
HORVU4Hr1G074110.1	Barley	golgi	16.08	23.04
TraesCS4D01G278300.1	Wheat	golgi, vacuole	15.54	22.97
TraesCS5D01G451800.1	Wheat	endoplasmic reticulum	13.3	22.95
TraesCS5A01G444100.1	Wheat	plastid	13.3	22.46
TraesCS4A01G023700.1	Wheat	golgi, vacuole	16.08	22.13
TraesCS4B01G279900.1	Wheat	golgi, vacuole	15.72	21.98
Zm00001d043295_P003	Maize	golgi	19.5	21.72
AT1G70750.1	Thale cress	endoplasmic reticulum, golgi, mitochondrion	13.84	20.56
AT4G13160.1	Thale cress	endoplasmic reticulum	4.49	17.73
AT3G54740.3	Thale cress	cytosol, nucleus, peroxisome	5.66	14.38
AT2G24140.2	Thale cress	nucleus	4.04	13.89
AT1G04890.1	Thale cress	mitochondrion	5.12	13.87
AT4G30830.1	Thale cress	nucleus	4.49	13.77
AT5G06560.1	Thale cress	nucleus	6.29	13.51
AT4G13630.1	Thale cress	extracellular, golgi	6.65	13.01
AT5G57830.1	Thale cress	nucleus	4.22	12.14
AT3G11850.2	Thale cress	nucleus	5.12	11.31

Protein Annotations

MapMan:20.2.4.3	EntrezGene:837402	ProteinID:AAF99773.1	ProteinID:AEE28348.1	ProteinID:AEE28349.1	EMBL:AK118159
ProteinID:ANM59414.1	ProteinID:ANM59415.1	ArrayExpress:AT1G08800	EnsemblPlantsGene:AT1G08800	RefSeq:AT1G08800	TAIR:AT1G08800
RefSeq:AT1G08800-TAIR-G	EnsemblPlants:AT1G08800.1	TAIR:AT1G08800.1	Unigene:At.43243	ncoils:Coil	UniProt:F4HXQ7
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	GO:GO:0030133
InterPro:GTD-bd	InterPro:IPR007656	RefSeq:NP_001117250.1	RefSeq:NP_001318957.1	RefSeq:NP_001321772.1	RefSeq:NP_172357.2
PFAM:PF04576	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51775	PANTHER:PTHR31448
PANTHER:PTHR31448:SF10	TMHMM:TMhelix	UniParc:UPI000017A04E	SEG:seg	:	:

Description

MYOB1Myosin-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HXQ7]

Coordinates

chr1:-:2812818..2818071

Molecular Weight (calculated)

125435.0 Da

IEP (calculated)

4.400

GRAVY (calculated)

-0.516

Length

1113 amino acids

Sequence
(BLAST)

0001: MGSRSFTRAL ALAFNEWLLM FMLFVNSIFS YVIARFADYS ELQSPCLMCS NLDHILRRTK DLKKTHWDII CSKHKSEISS LVYCHAHGKL VDVRGMCETC
0101: LFSFATTNKS NAETYRLLVG KLGEDSHFGS KSDRSKYPNC SKLTDCTCCN QLWTPQTAAT QVAEREILPK IGLLGKIRTG KQSAPKKSVS FNHLPDVGYT
0201: ELKIHSDTES EAVFSDTEPK QESSLNHLPP VGYNEPKIGL VGDVRTGKPS TPKKSVSFNH LPDVGYTELK IHSDTESEAV FSEDECVVLK DEDHKYQIVD
0301: LQTHPIITLP YDLATDKLLN FDFPLEPFVT RNDREEVQLQ ETNWRTYSSF PVLIPVNDVP ETSEKVFKEE EINSLDNLFL TSRAMKHFAA AKVKEEPIRL
0401: QDISSTPDVK ENPANASLME ETELICLSDV TATSGAMEHS EVILKEREEL IHLQDISVTP DFKENPANAS LLEETELICL NDVTSPLRAV EHSAVLLKDK
0501: VEPIRLQDGG SLTPDFMENS ANASILEETE LICVNDVTST SRTMGHSSVV LKENEEPIRF QDSSLTPDFK ENPASTFLVE ETELICLNDV TSPSRAMEHS
0601: TVFIEEKEEL VRHQNITLTQ DFMENPANSS LREETELICL NDVTSTSEVA ETPEDVLEGI ELMSIHDISL DEVSESVTTN QTSVEISKER DTDQADITSL
0701: ESEYIVVPSP NSMPENSTDN CVSDKKEMKE TSLRISSLSE MAPRDVTSHT EAALESESSS FNSMSVAAET NQYSGELLDL ADAYNIVVGN EGHYDSNGRQ
0801: QIENWMKKDT SRVSEDLKAL LTQISASRGI EFLSPRDVSP KISVNSSDQE TKNLDHDMQL LLQKRMLERN ESNLSLEGVS VTEIEGESEG DRLKRQVDYD
0901: RKLLTGLYKE LEEERSASAV ATNQAMAMIT RLQEEKASFQ MEALQNLRMM EEQAEYDMEA IQRLNDLLVE REKLIQDLEA EIEYFRDQTP QKKNKLDVAE
1001: KVTEMDSPSE GMSNKIQSCL VGFDEERLYI TSCLEKIENR VNGKAHDDNL PAQESVSELH ERVERLKGDL YFLEQVMNSL GHGNEGVQFV KEIASHLQTL
1101: RSLSMKRQDQ TEC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.