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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29652 Canola endoplasmic reticulum 69.87 72.84
Bra021657.1-P Field mustard endoplasmic reticulum 68.42 70.08
CDY67896 Canola endoplasmic reticulum, vacuole 67.89 67.63
GSMUA_Achr1P05380_001 Banana golgi, plasma membrane 20.66 26.75
KRH32143 Soybean extracellular 26.97 26.62
VIT_07s0141g00860.t01 Wine grape golgi 26.58 26.44
KRH15931 Soybean nucleus 15.0 25.11
GSMUA_AchrUn_... Banana golgi, vacuole 20.39 24.29
KRH19519 Soybean golgi 27.11 24.09
KXG38537 Sorghum golgi, plasma membrane, plastid 17.37 23.49
AT1G18990.1 Thale cress endoplasmic reticulum, plasma membrane 15.53 22.52
GSMUA_Achr4P17820_001 Banana golgi 21.58 22.25
AT1G74830.1 Thale cress extracellular, golgi, vacuole 15.79 22.14
Os10t0414800-01 Rice mitochondrion, nucleus, plastid, vacuole 16.71 21.24
EER93280 Sorghum golgi, vacuole 19.87 21.03
GSMUA_Achr7P01610_001 Banana golgi, mitochondrion 21.97 20.98
Zm00001d032962_P003 Maize endoplasmic reticulum, nucleus, plasma membrane 16.97 20.91
TraesCS1D01G135800.1 Wheat cytosol, golgi, mitochondrion, plastid 16.84 20.55
Os03t0164800-00 Rice golgi, mitochondrion 19.47 20.33
TraesCS1B01G153100.1 Wheat cytosol, golgi, mitochondrion, plastid 16.45 20.06
Os03t0799200-01 Rice golgi, vacuole 18.95 19.81
HORVU1Hr1G035080.2 Barley cytosol, golgi, mitochondrion, plastid 16.18 19.71
AT5G16720.1 Thale cress endoplasmic reticulum, golgi, vacuole 16.97 19.11
TraesCS5B01G448800.1 Wheat mitochondrion 16.32 19.02
TraesCS5A01G444100.1 Wheat plastid 16.45 18.97
TraesCS5D01G451800.1 Wheat endoplasmic reticulum 16.05 18.91
EER92810 Sorghum mitochondrion 19.61 18.86
PGSC0003DMT400080686 Potato endoplasmic reticulum, golgi, plastid 27.5 18.16
Zm00001d048439_P007 Maize golgi, mitochondrion, nucleus, plastid 19.08 18.12
AT4G13160.1 Thale cress endoplasmic reticulum 6.71 18.09
TraesCS4D01G278300.1 Wheat golgi, vacuole 17.89 18.06
TraesCS3D01G309900.1 Wheat golgi 20.66 18.05
HORVU4Hr1G074110.1 Barley golgi 18.42 18.02
TraesCS3A01G321400.1 Wheat golgi 20.66 17.96
HORVU3Hr1G075790.2 Barley golgi, mitochondrion 20.53 17.73
TraesCS3B01G343400.3 Wheat golgi, mitochondrion 20.26 17.52
TraesCS4A01G023700.1 Wheat golgi, vacuole 18.55 17.43
Solyc09g066140.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 27.24 17.32
TraesCS4B01G279900.1 Wheat golgi, vacuole 18.03 17.21
EES01549 Sorghum golgi 20.26 17.0
AT1G70750.1 Thale cress endoplasmic reticulum, golgi, mitochondrion 16.58 16.82
AT1G08800.1 Thale cress extracellular, vacuole 23.55 16.08
Zm00001d043295_P003 Maize golgi 20.39 15.52
AT1G04890.1 Thale cress mitochondrion 7.37 13.63
AT2G24140.2 Thale cress nucleus 5.66 13.27
AT4G30830.1 Thale cress nucleus 5.79 12.12
AT4G13630.1 Thale cress extracellular, golgi 8.82 11.78
AT3G54740.3 Thale cress cytosol, nucleus, peroxisome 6.71 11.64
AT5G57830.1 Thale cress nucleus 5.53 10.85
AT5G06560.1 Thale cress nucleus 7.37 10.81
AT3G11850.2 Thale cress nucleus 5.53 8.33
Protein Annotations
MapMan:20.2.4.3EntrezGene:817619ProteinID:AAC02740.1ProteinID:AEC08427.1ProteinID:ANM61398.1ArrayExpress:AT2G30690
EnsemblPlantsGene:AT2G30690RefSeq:AT2G30690TAIR:AT2G30690RefSeq:AT2G30690-TAIR-GEnsemblPlants:AT2G30690.2ncoils:Coil
UniProt:F4INW9GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005623
GO:GO:0012505GO:GO:0016020GO:GO:0016021GO:GO:0017022InterPro:GTD-bdInterPro:IPR007656
RefSeq:NP_001318321.1RefSeq:NP_180627.2PFAM:PF04576PFscan:PS51775PANTHER:PTHR31448PANTHER:PTHR31448:SF13
TMHMM:TMhelixUniParc:UPI00017391A7SEG:seg:::
Description
MYOB4Probable myosin-binding protein 4 [Source:UniProtKB/Swiss-Prot;Acc:F4INW9]
Coordinates
chr2:+:13076036..13079116
Molecular Weight (calculated)
85663.5 Da
IEP (calculated)
4.476
GRAVY (calculated)
-0.838
Length
760 amino acids
Sequence
(BLAST)
001: MDSNLIFDQK VINGFAPVLT YAACEWFLIL LMFIDALLSY LLVWFARYCR LQMPCFLCSK LLHPLHWRFL LCRNHRSEVS SYMSCQNHGN NLADCRGMCD
101: DCLLSFTKMT GPNPDMNRLL LGKLGYDLLS RSHFAHPRSC SCCNKPWRTR HHTQRLIRLG SRGRNSSSKP NIPAPRHLTR RGSGGSLKKM RDHIATSGSE
201: YVDVGSRDGM AHVGYTELKI HSDSESEFLF SDDDAFLHIT DFNVEPSEKR THKSRRRKSF DDKKMSNHKQ PVLQDNQYKK IHVEDNETVE SSMLGYNLEN
301: RTRQKQPVKA KEHDDVLSEL ITMSEARPFL LGSPRKYAAG VVTQNENEAE VSGSSSPSGG EFLSPSAENG ASREIRIQEH DDSSDFSQNI TSSAMEIEEF
401: EAAIEQKESD HMDVSGSVAN EPSSDEENEV EGDSKPLISN NMSDSLEQEQ SGEEESEVNE NNVAEEYFSN EEEDEVNGHT EPLTSKSESG SFAEEQSSED
501: EDGSNIYSVA KDHSSNEEDV DNEESEPMTS NNVTGVVKEE HSAKEEHGDH EETEPLTSLN ISKEEPSLEH SDKDSLKITE TRNTSNGSPE LKHSASVESF
601: VSISSDIEGE SLVEVLKQQL EHGRKSLRDL NKEFEEERNA SAIATNQAMA MITRLQEEKA ALHMEALQYL RMMDEQAEHD MDALERANDV LADREKEIQD
701: LEMELEYYRV KYPDEPREEI LASMGILGNT EETNVTSPTD ETSIKDSTDT KLTGSPSAEN
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.