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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:
  • nucleus 2
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400080686 Potato endoplasmic reticulum, golgi, plastid 87.78 91.14
VIT_07s0141g00860.t01 Wine grape golgi 24.52 38.35
Solyc11g045470.1.1 Tomato cytosol 2.68 38.1
GSMUA_Achr1P05380_001 Banana golgi, plasma membrane 18.33 37.31
GSMUA_AchrUn_... Banana golgi, vacuole 19.25 36.05
KRH19519 Soybean golgi 24.35 34.04
KRH32143 Soybean extracellular 21.0 32.6
KRH15931 Soybean nucleus 12.3 32.38
GSMUA_Achr4P17820_001 Banana golgi 19.33 31.34
GSMUA_Achr7P01610_001 Banana golgi, mitochondrion 20.0 30.03
KXG38537 Sorghum golgi, plasma membrane, plastid 13.81 29.36
Solyc01g097040.2.1 Tomato golgi, plasma membrane, plastid 22.09 28.98
Os10t0414800-01 Rice mitochondrion, nucleus, plastid, vacuole 14.48 28.93
EER93280 Sorghum golgi, vacuole 17.32 28.83
Solyc12g027730.1.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 12.47 28.71
CDY10753 Canola endoplasmic reticulum, plasma membrane 16.99 28.55
CDY47125 Canola endoplasmic reticulum, plasma membrane 17.07 28.29
HORVU3Hr1G075790.2 Barley golgi, mitochondrion 20.67 28.07
Bra018297.1-P Field mustard endoplasmic reticulum, extracellular 16.07 28.03
CDY29652 Canola endoplasmic reticulum 17.07 27.98
TraesCS3A01G321400.1 Wheat golgi 20.33 27.8
TraesCS1B01G153100.1 Wheat cytosol, golgi, mitochondrion, plastid 14.48 27.77
TraesCS3B01G343400.3 Wheat golgi, mitochondrion 20.25 27.53
Bra021657.1-P Field mustard endoplasmic reticulum 17.07 27.49
AT2G30690.2 Thale cress endoplasmic reticulum, plasma membrane, plastid 17.32 27.24
Os03t0799200-01 Rice golgi, vacuole 16.57 27.24
TraesCS1D01G135800.1 Wheat cytosol, golgi, mitochondrion, plastid 14.14 27.13
TraesCS3D01G309900.1 Wheat golgi 19.75 27.13
CDY67896 Canola endoplasmic reticulum, vacuole 17.15 26.87
Os03t0164800-00 Rice golgi, mitochondrion 16.23 26.65
HORVU1Hr1G035080.2 Barley cytosol, golgi, mitochondrion, plastid 13.89 26.6
Solyc03g113600.2.1 Tomato golgi 12.97 25.92
EER92810 Sorghum mitochondrion 16.82 25.44
EES01549 Sorghum golgi 19.25 25.39
TraesCS5D01G451800.1 Wheat endoplasmic reticulum 13.47 24.96
Zm00001d048439_P007 Maize golgi, mitochondrion, nucleus, plastid 16.65 24.88
TraesCS5A01G444100.1 Wheat plastid 13.64 24.73
Zm00001d032962_P003 Maize endoplasmic reticulum, nucleus, plasma membrane 12.72 24.64
HORVU4Hr1G074110.1 Barley golgi 15.9 24.45
Solyc06g071190.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 13.05 24.41
TraesCS5B01G448800.1 Wheat mitochondrion 13.31 24.39
TraesCS4D01G278300.1 Wheat golgi, vacuole 15.31 24.3
Zm00001d043295_P003 Maize golgi 19.83 23.72
TraesCS4A01G023700.1 Wheat golgi, vacuole 15.73 23.24
TraesCS4B01G279900.1 Wheat golgi, vacuole 15.23 22.86
Solyc04g007870.2.1 Tomato endoplasmic reticulum, golgi 14.06 20.19
Solyc10g081620.1.1 Tomato cytosol, plastid 7.2 16.67
Solyc12g098380.1.1 Tomato extracellular, plasma membrane, vacuole 8.95 14.36
Solyc07g005910.2.1 Tomato nucleus 5.1 13.47
Solyc11g020850.1.1 Tomato nucleus 5.77 13.14
Solyc11g045480.1.1 Tomato mitochondrion 1.92 11.33
Solyc12g009900.1.1 Tomato cytosol 5.44 10.2
Protein Annotations
EnsemblPlants:Solyc09g066140.2.1EnsemblPlantsGene:Solyc09g066140.2GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0017022InterPro:GTD-bdInterPro:IPR007656ncoils:Coil
PANTHER:PTHR31448PANTHER:PTHR31448:SF13PFAM:PF04576PFscan:PS51775SEG:segTMHMM:TMhelix
UniParc:UPI000276CB50UniProt:K4CUN9MapMan:20.2.4.3:::
Description
No Description!
Coordinates
chr9:+:64544836..64548881
Molecular Weight (calculated)
130664.0 Da
IEP (calculated)
4.787
GRAVY (calculated)
-0.755
Length
1195 amino acids
Sequence
(BLAST)
0001: MAAGGISSPG GFMTVLSYAV CEWFLMFMLF IDAALAQFIA KFASYYELQT PCMLCSRFNH ILGDKKSGCY GSHLCRNHKE DVSFQVFCHI HGNLADVRAM
0101: CEECLVSFAT ENILIKESDN LMIDKLGNKS FIPTSPGPWN CSCCQKTWRA RSSAQRLLQL TSVGFGASKA NVKPPLPRAP GRSRFSRRDS FKKIRDKISG
0201: PESPRTRASA LDPLSHVGYT ELKITSDSES EIQMSDDEDG CSATRGKNDS RSEDNVPHDK GITQKLETDQ PRQSSESKPY HLDQPRQLTV NSGKTVSFQA
0301: SDDFVGHGLA ELDWESLSPK TGASVLPEFI SSYNVAHASN PLEDHHMSRE SLTSNVFLPR ISDLSALSEL ISVTKTPSLS TINIHQTDLT EANDEGSNLT
0401: EKNNAKAPVH LDEGAPPISN QKNQADLSVV SNGGIKVSDR LEEPSAITDS ANAGEGMKSI PQLSTAVTDK SKTTSLRNHD RLGEPSEISD SVNAGEAMKS
0501: LPQLSTSVMD ESQTPSLQNH DRLEEPKATS DSANAGEGMK SLPQLSTSVT DESQTTSLRN HDRLGEAKAI SDSANAGEGM KSLPQLSTSV TDESQTTSLR
0601: NHDKLGEEKA ISDSANAGEG MKSLPQLSTS VTDESQTTNI RNHDKLGEAK AISDSANAGE GMKSLPQLST SVTDESQTTS LRNHDKLGEA KAISDSANAG
0701: EGMKSLTQRS TSVTDESQTT CLGNHDKLGE AKVISDSANA GEGMKSLPQR STSVTDESQT TSLRNHDRLG EPSAISASVN AGEGMKSLPQ LSASVMDESQ
0801: TASLRNHDHG DDQQRSDASS SDGVHVVQTS TIKGRDDSGN ESADGFSVSD IEDESIVDRL KRQIEHDQRY INSLYKELEE ERSASAIATN QAMAMITRLQ
0901: EEKASLHMEA LQYLRMMEEQ AEYDMEALER ANDQLAEREK ELQDMEEELL EYRNNIPDEL SAEDPQKENK NLKEENVINE NHSKEHVENK LNGSSDSKTI
1001: KVSKICDKPR QFNDSICNFE DEKLSISKHL ENLEKKLSQI SGRKASDNVP CNGCSERIKK DVDNQVKKQS NDAGSIYSQQ EEEISSSTRN DFSKSNGGPI
1101: DKPAALDVEN AFVSEKKNHV DNNNSKLSSL GGEVDGASIG NEISELSGRL QALEDDYKFL MHAFNSLQNG HEGIQLIQEI THQLQEIRKV EFDKR
Best Arabidopsis Sequence Match ( AT2G30690.1 )
(BLAST)
001: MDSNLIFDQK VINGFAPVLT YAACEWFLIL LMFIDALLSY LLVWFARYCR LQMPCFLCSK LLHPLHWRFL LCRNHRSEVS SYMSCQNHGN NLADCRGMCD
101: DCLLSFTKMT GPNPDMNRLL LGKLGYDLLS RSHFAHPRSC SCCNKPWRTR HHTQRLIRLG SRGRNSSSKP NIPAPRHLTR RGSGGSLKKM RDHIATSGSE
201: YVDVGSRDGM AHVGYTELKI HSDSESEFLF SDDDAFLHIT DFNVEPSEKR THKSRRRKSF DDKKMSNHKQ PVLQDNQYKK IHVEDNETVE SSMLGYNLEN
301: RTRQKQPVKA KEHDDVLSEL ITMSEARPFL LGSPRKYAAG VVTQNENEAE VSGSSSPSGG EFLSPSAENG ASREIRIQEH DDSSDFSQNI TSSAMEIEEF
401: EAAIEQKESD HMDVSGSVAN EPSSDEENEV EGDSKPLISN NMSDSLEQEQ SGEEESEVNE NNVAEEYFSN EEEDEVNGHT EPLTSKSESG SFAEEQSSED
501: EDGSNIYSVA KDHSSNEEDV DNEESEPMTS NNVTGVVKEE HSAKEEHGDH EETEPLTSLN ISKEEPSLEH SDKDSLKITE TRNTSNGSPE LKHSASVESF
601: VSISSDIEGE SLVEVLKQQL EHGRKSLRDL NKEFEEERNA SAIATNQAMA MITRLQEEKA ALHMEALQYL RMMDEQAEHD MDALERANDV LADREKEIQD
701: LEMELEYYRV KYPDEPREEI LASMGILGNT EETNVTSPTD ETSIKDSTDT KLTGSPSAEN
Arabidopsis Description
MYOB4Probable myosin-binding protein 4 [Source:UniProtKB/Swiss-Prot;Acc:F4INW9]
SUBAcon: [endoplasmic reticulum,plastid,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.