Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022326 | Potato | nucleus | 96.43 | 16.33 |
| KRH71751 | Soybean | nucleus | 71.43 | 12.24 |
| Solyc10g081620.1.1 | Tomato | cytosol, plastid | 75.0 | 12.21 |
| KRH32933 | Soybean | nucleus | 70.24 | 12.04 |
| Solyc07g005910.2.1 | Tomato | nucleus | 48.81 | 9.05 |
| Solyc11g020850.1.1 | Tomato | nucleus | 46.43 | 7.43 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 40.48 | 6.55 |
| Solyc12g009900.1.1 | Tomato | cytosol | 46.43 | 6.12 |
| Solyc03g113600.2.1 | Tomato | golgi | 38.1 | 5.35 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 38.1 | 5.01 |
| Solyc12g098380.1.1 | Tomato | extracellular, plasma membrane, vacuole | 44.05 | 4.97 |
| Solyc01g097040.2.1 | Tomato | golgi, plasma membrane, plastid | 39.29 | 3.62 |
| Solyc04g007870.2.1 | Tomato | endoplasmic reticulum, golgi | 33.33 | 3.37 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 7.14 | 2.96 |
| Solyc09g066140.2.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 38.1 | 2.68 |
Protein Annotations
| EnsemblPlants:Solyc11g045470.1.1 | EnsemblPlantsGene:Solyc11g045470.1 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | UniParc:UPI000276A782 | UniProt:K4D8L1 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:30426384..30426638
Molecular Weight (calculated)
9871.8 Da
IEP (calculated)
4.047
GRAVY (calculated)
-0.521
Length
84 amino acids
Sequence
(BLAST)
(BLAST)
1: MGNECIALRE MVCGQQETIQ ELSVELEEER EAASLAANEA MSMILRLQRE KADSQMEFRQ FKMFTEEKMA HDQQEMMALE DFLY
001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]
SUBAcon: [peroxisome,plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.