Factsheet for Solyc12g098380.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011603	Potato	nucleus	63.22	92.35
Bra034886.1-P	Field mustard	cytosol	8.86	51.56
CDY47332	Canola	extracellular, plasma membrane	17.45	49.81
Bra032692.1-P	Field mustard	extracellular, plasma membrane	17.05	48.66
CDY01114	Canola	extracellular, plasma membrane	17.05	48.66
Solyc11g045470.1.1	Tomato	cytosol	4.97	44.05
AT4G13160.1	Thale cress	endoplasmic reticulum	16.38	43.26
AT1G04890.1	Thale cress	mitochondrion	20.27	36.74
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	25.5	36.4
CDX89779	Canola	endoplasmic reticulum, extracellular	25.37	36.28
GSMUA_Achr6P06580_001	Banana	nucleus	14.5	36.12
CDY18267	Canola	endoplasmic reticulum, plasma membrane	24.97	35.7
KRH07498	Soybean	endoplasmic reticulum, plasma membrane	29.8	34.05
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	26.44	32.24
KRH66087	Soybean	endoplasmic reticulum, plasma membrane	27.11	31.17
TraesCS2D01G272500.1	Wheat	plastid	17.85	27.42
TraesCS2B01G291300.1	Wheat	plastid	17.58	27.01
TraesCS2A01G273300.1	Wheat	plastid	17.45	26.8
Zm00001d014088_P001	Maize	plastid	17.05	25.66
OQU91677	Sorghum	endoplasmic reticulum, golgi	16.51	25.62
Zm00001d032786_P001	Maize	plastid	13.15	23.84
Solyc10g081620.1.1	Tomato	cytosol, plastid	13.29	19.19
HORVU2Hr1G066690.6	Barley	cytosol, mitochondrion	11.28	18.96
Solyc11g045480.1.1	Tomato	mitochondrion	4.97	18.23
Solyc07g005910.2.1	Tomato	nucleus	10.74	17.66
Solyc12g027730.1.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	11.14	15.99
Solyc03g113600.2.1	Tomato	golgi	12.48	15.55
Solyc12g009900.1.1	Tomato	cytosol	12.62	14.76
Solyc06g071190.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	11.95	13.93
Solyc11g020850.1.1	Tomato	nucleus	9.8	13.9
Solyc04g007870.2.1	Tomato	endoplasmic reticulum, golgi	14.09	12.62
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	13.29	10.87
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	14.36	8.95

Protein Annotations

EnsemblPlants:Solyc12g098380.1.1	EnsemblPlantsGene:Solyc12g098380.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:GTD-bd
InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF3	PFAM:PF04576	PFscan:PS51775
SEG:seg	TMHMM:TMhelix	UniParc:UPI000276A1EF	UniProt:K4DHL1	MapMan:35.2	:

Description

No Description!

Coordinates

chr12:+:65904914..65909423

Molecular Weight (calculated)

83558.0 Da

IEP (calculated)

5.600

GRAVY (calculated)

-0.618

Length

745 amino acids

Sequence
(BLAST)

001: MSCEGRYMWS LSGIVGAFVD LAIAYFLLCA ATVAFIASKF LDFFGLRLPC PGDGLLFGTV PNRNLCFHRL LVDFPAEKVS NVQLSIRANF PFTDTILGKD
101: QNCDLNLRLI GQEKGNSPHG YLEMGDEASC SSVSDARKSH NIAMIELSPR NEFGQKGKGV MNQRQRGGVR RRRRKTAVDY GRSSSVSSYD PQYEDFPLGP
201: PSPPSTNKED GGHPALVMRL GQRDSFELTG SSDEIEHIEK NVASIEELRH NGEPVSSFHE GNRIRLLERA LEHEREARDA LCIELEKERN AAASAADEAM
301: AMILRLQEEK AAIEMDARQY QRLIEEKSAF EAEEMNILME ILMRTEREKH FLEKELEVYR QMTYLGNEEP TGDSGNVVDA LRRHVASPDL NEDPLLMLHQ
401: ISASFNKRTV AENKNSEEVS SLDKQNYIAL AGEAPIQRQN KDVNSQKQVD LTEHSCSQEY QEKEMVFMVN HSDVAPGNGK ILDTSLKPCE TGLSEQKLPD
501: QAIPLEGEVL KENPDMETSD RACIDVSRKD KCLMYHETVG YQGSKCPCNL TSVKEPRVHD VHVIVDGSNF CNDVSNGESR KSALEFCGKT SHPVEASPTQ
601: DVIRDRPSTS TLYTQVDLKI SSDTTGGLPP VGSRGKPLLR DSRGNSVCSV DNERLKIEME VERLRERLKI VQEGREKLDL TAEHREREKM QLKLLEDIAH
701: QLQEIRQLGE PEKAVRQASL PLPFSKGMSK KRRSRSVSVG MQQSS

Best Arabidopsis Sequence Match ( AT4G13630.2 )
(BLAST)

001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA

Arabidopsis Description

Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.