CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

nucleus 1
mitochondrion 2
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014088_P001	Maize	plastid	86.04	83.43
Zm00001d032786_P001	Maize	plastid	67.5	78.83
TraesCS2D01G272500.1	Wheat	plastid	58.96	58.35
TraesCS2B01G291300.1	Wheat	plastid	58.96	58.35
TraesCS2A01G273300.1	Wheat	plastid	57.92	57.32
HORVU2Hr1G066690.6	Barley	cytosol, mitochondrion	42.29	45.82
Bra034886.1-P	Field mustard	cytosol	8.75	32.81
Bra032692.1-P	Field mustard	extracellular, plasma membrane	13.96	25.67
CDY01114	Canola	extracellular, plasma membrane	13.96	25.67
CDY47332	Canola	extracellular, plasma membrane	13.96	25.67
AT4G13160.1	Thale cress	endoplasmic reticulum	13.96	23.76
KXG28744	Sorghum	cytosol	18.33	19.43
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	23.54	18.49
CDY68842	Canola	vacuole	21.25	18.12
Bra032725.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	20.83	18.12
CDY01147	Canola	extracellular, golgi, vacuole	20.83	18.08
AT4G13630.1	Thale cress	extracellular, golgi	21.25	17.93
Bra015360.1-P	Field mustard	endoplasmic reticulum, extracellular	18.96	17.43
CDY18267	Canola	endoplasmic reticulum, plasma membrane	18.75	17.27
CDX89779	Canola	endoplasmic reticulum, extracellular	18.75	17.27
GSMUA_Achr6P06580_001	Banana	nucleus	10.42	16.72
PGSC0003DMT400011603	Potato	nucleus	17.71	16.67
OQU91257	Sorghum	nucleus	17.71	16.63
Solyc12g098380.1.1	Tomato	extracellular, plasma membrane, vacuole	25.62	16.51
AT1G04890.1	Thale cress	mitochondrion	13.54	15.82
VIT_05s0029g00110.t01	Wine grape	endoplasmic reticulum, golgi	25.83	15.56
KRH07498	Soybean	endoplasmic reticulum, plasma membrane	20.62	15.18
KRH66087	Soybean	endoplasmic reticulum, plasma membrane	18.75	13.89
OQU80230	Sorghum	cytosol	11.46	13.75
KXG38537	Sorghum	golgi, plasma membrane, plastid	14.17	12.1
OQU80548	Sorghum	nucleus	12.29	11.17
OQU79118	Sorghum	plastid	5.0	9.88
EER95149	Sorghum	mitochondrion	16.46	9.07
EER93280	Sorghum	golgi, vacuole	12.5	8.36
EER92810	Sorghum	mitochondrion	13.54	8.23
EES01549	Sorghum	golgi	13.96	7.4
OQU91120	Sorghum	endoplasmic reticulum, plastid	15.83	7.28

Protein Annotations

EnsemblPlants:OQU91677	EnsemblPlantsGene:SORBI_3001G227500	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:GTD-bd
InterPro:IPR007656	ncoils:Coil	PANTHER:PTHR31422	PANTHER:PTHR31422:SF3	PFAM:PF04576	PFscan:PS51775
ProteinID:OQU91677	ProteinID:OQU91677.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B8B9D24	UniProt:A0A1Z5S6W7
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:21802422..21803924

Molecular Weight (calculated)

52748.6 Da

IEP (calculated)

4.529

GRAVY (calculated)

-0.548

Length

480 amino acids

Sequence
(BLAST)

001: MTTPCPGAAA VRVQWTARSL AGAFLDLTLA WACLCLAALA AAAARFLALL GLPLPCTCAR PHLPCILAFL ACYPSRAVGS LHAALRARFP FAGPTDDEDR
101: RQEGAEEDGE EQAVDAREEE ADLRRREEAR AELQRELEKE RSAAASAAEE AMSMILRLQK EKSALEIEAR QQRRTADERC AFYEDEVEEL RDIVLVRERE
201: ARALRKEVDA YRRLLGLGPA EDDEEEDDEQ EMVTPHSFLM SEGEPSSSRS VDANRMQHFR NNSSGFSFKT PSLREQLIVP PLTADRINVG SDDSVAVQTP
301: AKVPTPQSRL ELDSSEDEDE DDGAETVEIL PLSARSQDLD QGGDFHVDAA PGMESTCAKD TCTKEQTAHA FQEVECPGID KIVNNDQTAK VKGLIGRSFS
401: EATMQAERLQ TRAAADDLLG KSLNAIKGAQ DKIRHAANER RQSLQLQLLE DIANQLQGIK DAAEAGRQVY CATPKSSKRS

Best Arabidopsis Sequence Match ( AT4G13630.2 )
(BLAST)

001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA

Arabidopsis Description

Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.