Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01147 | Canola | extracellular, golgi, vacuole | 27.35 | 39.42 |
| Bra032725.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 27.23 | 39.31 |
| CDY68842 | Canola | vacuole | 27.48 | 38.9 |
| GSMUA_Achr6P06580_001 | Banana | nucleus | 14.55 | 38.8 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 27.6 | 38.66 |
| GSMUA_Achr3P17210_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 29.49 | 38.46 |
| TraesCS2D01G272500.1 | Wheat | plastid | 17.06 | 28.04 |
| TraesCS2B01G291300.1 | Wheat | plastid | 16.94 | 27.84 |
| TraesCS2A01G273300.1 | Wheat | plastid | 16.81 | 27.63 |
| Zm00001d014088_P001 | Maize | plastid | 16.31 | 26.26 |
| OQU91677 | Sorghum | endoplasmic reticulum, golgi | 15.56 | 25.83 |
| Zm00001d032786_P001 | Maize | plastid | 13.05 | 25.3 |
| VIT_08s0032g00720.t01 | Wine grape | plastid | 13.93 | 21.35 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 11.04 | 19.86 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 12.42 | 15.94 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 9.03 | 15.35 |
| VIT_14s0006g00920.t01 | Wine grape | endoplasmic reticulum, golgi | 15.93 | 13.94 |
| VIT_07s0141g00860.t01 | Wine grape | golgi | 12.92 | 13.48 |
| VIT_14s0081g00320.t01 | Wine grape | nucleus | 11.17 | 12.24 |
| VIT_01s0011g05340.t01 | Wine grape | endoplasmic reticulum, golgi | 16.19 | 12.06 |
Protein Annotations
| ArrayExpress:VIT_05s0029g00110 | EMBL:FN594958 | EnsemblPlants:VIT_05s0029g00110.t01 | EnsemblPlantsGene:VIT_05s0029g00110 | EntrezGene:100250255 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF3 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CBI17315 | ProteinID:CBI17315.3 | RefSeq:XP_010650354.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0001BE1113 | UniProt:D7SNT6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr5:+:14230912..14235424
Molecular Weight (calculated)
88694.1 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.622
Length
797 amino acids
Sequence
(BLAST)
(BLAST)
001: MACQEIHSWT FGGLVGAYLD LAIAYLLLCG STLAFFASKF LSFFGLCLPC PCNGFFGNPN GDNCLQKFLV DYPTERISSV QLCVKSKFPF DSVWANEGSP
101: HPNWKLLKGR NSDDGAVGLE GEASCSSFWD VMRSPDIAGK DSISRNGSCG VMNTPALKEG KSDTKGKRVS NQRPKTGVRR RRRSAVDHGK FSSVSSFDPP
201: RLDAPSGLRS PSSVSETGEA FVGKTLVPDA SGGEDGFQDE LVPILIDLGE RALHGIKLNE HIDEDKPSEK DASSAEEVKC NARGKLSFNG NTENTVRVLE
301: QALEEEHAAR AALYHELEKE RSAAASAADE AMAMILRIQE EKASIEMEAR QFQRIIEEKS AYDAEEMNLL KEILLRRERE KHFLEKEVEA YRQMMFSEND
401: LLEGNTHDIV DTPEQRPISS LYLSEDPVLM LRRISESIDK EEKVKDADRC SVYESTSIEM KYPTLSFSKE LPIPDWEEDA DLSKGGEIHV NPNVGKHHSH
501: KSGLNGKCNE EFQEKGMLPV DENQCAQKRG VQKLGACSQL YRSSSSQENS FLEKASAPIG EDQKQSGEIK LFQGIISTTT KTHAEAEMHV PHDGEDLDKL
601: GKTADHESKD HCCSAFDIEP RVHDVHVIDH ESNLCNEANE SKIEQTPDIP AKLDPPVEAS LIQRIGVVCD FPMMSTLESE TNNDQSFSDI TNGLPPLGGS
701: RGKALLSDMR RHSISSVDNE RLKIETEVER LRERLRIVQE GREKLNFSVE HRERENIQLQ LLEDIASQLR EIRQLTEPGK AVRQASLPPP SSKEMTG
101: HPNWKLLKGR NSDDGAVGLE GEASCSSFWD VMRSPDIAGK DSISRNGSCG VMNTPALKEG KSDTKGKRVS NQRPKTGVRR RRRSAVDHGK FSSVSSFDPP
201: RLDAPSGLRS PSSVSETGEA FVGKTLVPDA SGGEDGFQDE LVPILIDLGE RALHGIKLNE HIDEDKPSEK DASSAEEVKC NARGKLSFNG NTENTVRVLE
301: QALEEEHAAR AALYHELEKE RSAAASAADE AMAMILRIQE EKASIEMEAR QFQRIIEEKS AYDAEEMNLL KEILLRRERE KHFLEKEVEA YRQMMFSEND
401: LLEGNTHDIV DTPEQRPISS LYLSEDPVLM LRRISESIDK EEKVKDADRC SVYESTSIEM KYPTLSFSKE LPIPDWEEDA DLSKGGEIHV NPNVGKHHSH
501: KSGLNGKCNE EFQEKGMLPV DENQCAQKRG VQKLGACSQL YRSSSSQENS FLEKASAPIG EDQKQSGEIK LFQGIISTTT KTHAEAEMHV PHDGEDLDKL
601: GKTADHESKD HCCSAFDIEP RVHDVHVIDH ESNLCNEANE SKIEQTPDIP AKLDPPVEAS LIQRIGVVCD FPMMSTLESE TNNDQSFSDI TNGLPPLGGS
701: RGKALLSDMR RHSISSVDNE RLKIETEVER LRERLRIVQE GREKLNFSVE HRERENIQLQ LLEDIASQLR EIRQLTEPGK AVRQASLPPP SSKEMTG
001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.