Factsheet for VIT_14s0081g00320.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68762	Soybean	golgi, plasma membrane	44.84	37.73
KRG97006	Soybean	plastid	44.15	37.37
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	38.93	32.87
GSMUA_Achr4P17820_001	Banana	golgi	32.32	31.89
VIT_07s0141g00860.t01	Wine grape	golgi	31.91	30.37
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	37.69	30.08
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	23.93	29.64
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	32.05	29.27
GSMUA_AchrUn_...	Banana	golgi, vacuole	25.03	28.53
Os10t0414800-01	Rice	mitochondrion, nucleus, plastid, vacuole	21.46	26.09
TraesCS3A01G321400.1	Wheat	golgi	30.81	25.63
EER93280	Sorghum	golgi, vacuole	24.9	25.21
TraesCS3B01G343400.3	Wheat	golgi, mitochondrion	30.26	25.03
TraesCS3D01G309900.1	Wheat	golgi	29.57	24.71
HORVU3Hr1G075790.2	Barley	golgi, mitochondrion	29.57	24.43
EES01549	Sorghum	golgi	30.12	24.17
KXG38537	Sorghum	golgi, plasma membrane, plastid	18.57	24.02
Os03t0164800-00	Rice	golgi, mitochondrion	23.93	23.9
TraesCS5D01G451800.1	Wheat	endoplasmic reticulum	21.05	23.72
Os03t0799200-01	Rice	golgi, vacuole	23.66	23.66
HORVU1Hr1G035080.2	Barley	cytosol, golgi, mitochondrion, plastid	20.22	23.56
EER92810	Sorghum	mitochondrion	25.58	23.54
TraesCS5B01G448800.1	Wheat	mitochondrion	20.91	23.31
TraesCS1D01G135800.1	Wheat	cytosol, golgi, mitochondrion, plastid	19.95	23.27
TraesCS1B01G153100.1	Wheat	cytosol, golgi, mitochondrion, plastid	19.81	23.11
Zm00001d048439_P007	Maize	golgi, mitochondrion, nucleus, plastid	25.31	23.0
TraesCS5A01G444100.1	Wheat	plastid	20.63	22.76
TraesCS4D01G278300.1	Wheat	golgi, vacuole	23.38	22.58
Zm00001d043295_P003	Maize	golgi	30.12	21.92
HORVU4Hr1G074110.1	Barley	golgi	23.38	21.88
VIT_17s0000g05320.t01	Wine grape	endoplasmic reticulum, golgi	18.43	21.58
TraesCS4A01G023700.1	Wheat	golgi, vacuole	23.93	21.51
TraesCS4B01G279900.1	Wheat	golgi, vacuole	23.25	21.23
Zm00001d032962_P003	Maize	endoplasmic reticulum, nucleus, plasma membrane	16.78	19.77
VIT_14s0006g00920.t01	Wine grape	endoplasmic reticulum, golgi	22.28	17.78
VIT_08s0032g00720.t01	Wine grape	plastid	11.83	16.54
VIT_11s0037g00610.t01	Wine grape	nucleus	10.18	15.78
VIT_01s0011g05340.t01	Wine grape	endoplasmic reticulum, golgi	21.6	14.67
VIT_05s0029g00110.t01	Wine grape	endoplasmic reticulum, golgi	12.24	11.17

Protein Annotations

EntrezGene:100258654	wikigene:100258654	MapMan:20.2.4.3	ProteinID:CCB58715	ProteinID:CCB58715.1	ncoils:Coil
UniProt:F6HVK2	EMBL:FN596256	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0017022
InterPro:GTD-bd	InterPro:IPR007656	EntrezGene:LOC100258654	wikigene:LOC100258654	PFAM:PF04576	PFscan:PS51775
PANTHER:PTHR31448	PANTHER:PTHR31448:SF10	UniParc:UPI000210A1A8	ArrayExpress:VIT_14s0081g00320	EnsemblPlantsGene:VIT_14s0081g00320	EnsemblPlants:VIT_14s0081g00320.t01
RefSeq:XP_002263011	RefSeq:XP_002263011.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:8030352..8037856

Molecular Weight (calculated)

80186.0 Da

IEP (calculated)

4.435

GRAVY (calculated)

-0.544

Length

727 amino acids

Sequence
(BLAST)

001: MVVECRTLTR KPYIPSESDK RLFQTKSIES EAAELDLSLS GAVEHSHEGL KKKQYIPSGS VGAPQLGSKR LDPLSHIGYT ELKITSDSES EILLSDDDDA
101: NTIPCETNQP KEDVTVHSLL PEPRVITLAD DLATEKLIIP AFVSEPSDAM PQVRSNAIKL NGTASEAPTA AIGHGLEELD WQKLEHKVDP SVLPALTHTD
201: DTPASFNSVE TPVELSKQVL DDAEASEVPQ TSVAEKGEIS KTGSGPITGG VIGSEINPML VDTVHQMPNS LDLGDAYRLA VSNRGRQSSG ILADQRTGKD
301: SAKVSGEFKV LLSQMSATRG FELPLNDISP RVSGNVDDLK TFDSSTPTGL HILQKRISLE RNESGLSLDG SIVSEIEGES MVDRLKRQVE HDRKTIIALY
401: KELDEERNAS AISANQAMAM ITRLQEEKAA LHMEALQYLR MMEEQSEYDM EALQKTNDLL TEKEKEMQDL EAELEFYRKK FPDETMLENT LQPTCDPKIE
501: DVRMEHSDAS CVGNDVDVPS NVVMVKPKIC DNVERKEMSF NDKHMSIMKN SLLEIEEERL YISECLKILE VKLRLFSNDG ACSNLANGEY SGNGVSDSKE
601: LNHKEGSQED GGMEETDLPV QNDISVSRGS PHAGGSFALS QNSQFVGKES GQSSSIFCRE NDLIALGNEI SHLNDRLESL EADRDFLEHS VNSLRNGDEG
701: LQFIQQIASD LQELRKIGIR RRNQTVS

Best Arabidopsis Sequence Match ( AT1G08800.2 )
(BLAST)

0001: MGSRSFTRAL ALAFNEWLLM FMLFVNSIFS YVIARFADYS ELQSPCLMCS NLDHILRRTK DLKKTHWDII CSKHKSEISS LVYCHAHGKL VDVRGMCETC
0101: LFSFATTNKS NAETYRLLVG KLGEDSHFGS KSDRSKYPNC SKLTDCTCCN QLWTPQTAAT QVAEREILPK IGLLGKIRTG KQSAPKKSVS FNHLPDVGYT
0201: ELKIHSDTES EAVFSDTEPK QESSLNHLPP VGYNEPKIGL VGDVRTGKPS TPKKSVSFNH LPDVGYTELK IHSDTESEAV FSEDECVVLK DEDHKYQIVD
0301: LQTHPIITLP YDLATDKLLN FDFPLEPFVT RNDREEVQLQ ETNWRTYSSF PVLIPVNDVP ETSEKVFKEE EINSLDNLFL TSRAMKHFAA AKVKEEPIRL
0401: QDISSTPDVK ENPANASLME ETELICLSDV TATSGAMEHS EVILKEREEL IHLQDISVTP DFKENPANAS LLEETELICL NDVTSPLRAV EHSAVLLKDK
0501: VEPIRLQDGG SLTPDFMENS ANASILEETE LICVNDVTST SRTMGHSSVV LKENEEPIRF QDSSLTPDFK ENPASTFLVE ETELICLNDV TSPSRAMEHS
0601: TVFIEEKEEL VRHQNITLTQ DFMENPANSS LREETELICL NDVTSTSEVA ETPEDVLEGI ELMSIHDISL DEVSESVTTN QTSVEISKER DTDQADITSL
0701: ESEYIVVPSP NSMPENSTDN CVSDKKEMKE TSLRISSLSE MAPRDVTSHT EAALESESSS FNSMSVAAET NQYSGELLDL ADAYNIVVGN EGHYDSNGRQ
0801: QIENWMKKDT SRVSEDLKAL LTQISASRGI EFLSPRDVSP KISVNSSDQE TKNLDHDMQL LLQKRMLERN ESNLSLEGVS VTEIEGESEG DRLKRQVDYD
0901: RKLLTGLYKE LEEERSASAV ATNQAMAMIT RLQEEKASFQ MEALQNLRMM EEQAEYDMEA IQRLNDLLVE REKLIQDLEA EIEYFRDQTP QKKNKLDVAE
1001: KVTEMDSPSE GMSNKIQSCL VGFDEERLYI TSCLEKIENR VNGKAHDDNL PAQESVSELH ERVERLKGDL YFLEQVMNSL GHGNEGVQFV KEIASHLQTL
1101: RSLSMKRQDQ TEC

Arabidopsis Description

MYOB1Myosin-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HXQ7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.