Factsheet for GSMUA_Achr1P05380_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	golgi, vacuole	58.94	54.23
KXG38537	Sorghum	golgi, plasma membrane, plastid	33.22	34.7
Os10t0414800-01	Rice	mitochondrion, nucleus, plastid, vacuole	33.56	32.94
GSMUA_Achr4P17820_001	Banana	golgi	38.67	30.8
TraesCS1D01G135800.1	Wheat	cytosol, golgi, mitochondrion, plastid	31.86	30.02
TraesCS1B01G153100.1	Wheat	cytosol, golgi, mitochondrion, plastid	31.86	30.02
HORVU1Hr1G035080.2	Barley	cytosol, golgi, mitochondrion, plastid	31.01	29.17
Os03t0164800-00	Rice	golgi, mitochondrion	36.12	29.12
Zm00001d032962_P003	Maize	endoplasmic reticulum, nucleus, plasma membrane	29.81	28.36
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	37.82	27.89
TraesCS4D01G278300.1	Wheat	golgi, vacuole	35.6	27.76
EER92810	Sorghum	mitochondrion	36.97	27.47
HORVU4Hr1G074110.1	Barley	golgi	35.95	27.16
TraesCS4B01G279900.1	Wheat	golgi, vacuole	36.12	26.63
Zm00001d048439_P007	Maize	golgi, mitochondrion, nucleus, plastid	35.95	26.38
KRH68762	Soybean	golgi, plasma membrane	38.67	26.27
KRG97006	Soybean	plastid	38.33	26.19
VIT_07s0141g00860.t01	Wine grape	golgi	34.07	26.18
TraesCS4A01G023700.1	Wheat	golgi, vacuole	35.78	25.96
PGSC0003DMT400070777	Potato	golgi, plasma membrane, plastid	36.46	24.85
KRH19519	Soybean	golgi	35.6	24.44
KRH32143	Soybean	extracellular	31.69	24.16
VIT_14s0081g00320.t01	Wine grape	nucleus	29.64	23.93
Solyc01g097040.2.1	Tomato	golgi, plasma membrane, plastid	37.14	23.93
KRH15931	Soybean	nucleus	18.23	23.57
CDY10753	Canola	endoplasmic reticulum, plasma membrane	27.26	22.5
CDY47125	Canola	endoplasmic reticulum, plasma membrane	27.43	22.33
CDY29652	Canola	endoplasmic reticulum	27.43	22.09
Bra018297.1-P	Field mustard	endoplasmic reticulum, extracellular	25.72	22.04
CDY32134	Canola	endoplasmic reticulum, plasma membrane, vacuole	32.71	21.97
Bra021657.1-P	Field mustard	endoplasmic reticulum	27.26	21.56
CDY67896	Canola	endoplasmic reticulum, vacuole	27.26	20.97
CDX95032	Canola	endoplasmic reticulum, vacuole	33.73	20.69
Bra018599.1-P	Field mustard	extracellular, vacuole	33.73	20.67
AT2G30690.2	Thale cress	endoplasmic reticulum, plasma membrane, plastid	26.75	20.66
CDX93536	Canola	extracellular, vacuole	33.73	20.54
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	26.75	19.85
PGSC0003DMT400080686	Potato	endoplasmic reticulum, golgi, plastid	37.48	19.11
Solyc09g066140.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	37.31	18.33
AT1G08800.1	Thale cress	extracellular, vacuole	33.73	17.79
GSMUA_Achr8P04680_001	Banana	cytosol, mitochondrion	11.24	17.6
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	27.77	17.34
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	26.75	17.18
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	13.12	17.11
Bra030742.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plastid, vacuole	32.71	16.67
GSMUA_Achr3P15020_001	Banana	nucleus	12.61	16.41
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	12.44	15.3
GSMUA_Achr8P26680_001	Banana	cytosol	7.84	15.18
GSMUA_Achr6P06580_001	Banana	nucleus	7.5	14.72
GSMUA_Achr1P14210_001	Banana	cytosol	8.86	14.57
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	13.97	13.42
GSMUA_Achr10P...	Banana	nucleus	9.37	11.41

Protein Annotations

EnsemblPlants:GSMUA_Achr1P05380_001	EnsemblPlants:GSMUA_Achr1T05380_001	EnsemblPlantsGene:GSMUA_Achr1G05380_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0017022	InterPro:GTD-bd	InterPro:IPR007656
ncoils:Coil	PANTHER:PTHR31448	PANTHER:PTHR31448:SF13	PFAM:PF04576	PFscan:PS51775	SEG:seg
TMHMM:TMhelix	UniParc:UPI000295978D	UniProt:M0RX96	MapMan:20.2.4.3	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G05380_001]

Coordinates

chr1:-:4416650..4419093

Molecular Weight (calculated)

65590.7 Da

IEP (calculated)

5.759

GRAVY (calculated)

-0.457

Length

587 amino acids

Sequence
(BLAST)

001: MAAGGNVKAQ AKSCQFFSVL SAAVCEWYLI IFLLINAVLA YVATRFARLC NLPTPCLLCS RLDHILGSER RGFYRNLFCH AHKVEISSLV YCHGHGKLAD
101: FRDMCKACLL SSDLEPASSG TGLCSCCSDS FNLHRLLQAK KKKKKKLEAG VPNRRAQLRK RRVGYNGLVI TSDSESEMPM SDDDDDDGDD GHVSSTNSLT
201: SQIMNDSIVV TRSVLDHTDS FKHAINNKGI MLSPKFSEII AGKESSRGQE DLKLRLSRAF DLPWSDIIAS PRAEDLKSSD ASSSIGLQNI AKRLSVERTN
301: SSLETFDASI VVSDIEGETS VDRLKRQIEL DRKCMSALYK ELEEERSAST IAANEAMAMI NRLQEEKAAM QMEAFQYLRM MEEQAEYDQE AIHKLNDVIN
401: ERDKELLDLE TEFERYRRRH RGAEPEEKRT VSVGDLESTG LSPATTPRDG HGAKDLELGF EEEKVHILAC LRRLQNNHSG VEVLPENGSS PSRTHSNVEA
501: TTTMDNQFSA DQQHYTSDAC RDMNSVQEEV AKLIKRVVEL DADREFIGHT MNALNYGNDG VLLVQEIACQ LKELRRIPLA AKEPNVA

Best Arabidopsis Sequence Match ( AT1G74830.1 )
(BLAST)

001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL

Arabidopsis Description

MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.