Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX88641 | Canola | nucleus | 6.64 | 26.23 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 24.69 | 25.37 |
| CDY28219 | Canola | cytosol | 15.35 | 25.17 |
| Bra006798.1-P | Field mustard | nucleus | 15.98 | 25.16 |
| CDX68698 | Canola | cytosol | 14.73 | 24.15 |
| PGSC0003DMT400028965 | Potato | nucleus | 22.41 | 23.84 |
| Solyc07g005910.2.1 | Tomato | nucleus | 22.2 | 23.62 |
| PGSC0003DMT400023950 | Potato | nucleus | 21.58 | 23.37 |
| KRH63109 | Soybean | nucleus | 21.99 | 22.99 |
| Bra006800.1-P | Field mustard | cytosol | 7.68 | 22.84 |
| Bra011226.1-P | Field mustard | cytosol | 15.56 | 22.8 |
| CDX88643 | Canola | nucleus | 11.2 | 22.69 |
| CDX76832 | Canola | nucleus | 15.15 | 22.67 |
| KRH72337 | Soybean | nucleus | 21.99 | 22.6 |
| KRH03013 | Soybean | nucleus | 22.2 | 22.57 |
| CDY02772 | Canola | nucleus | 17.01 | 22.4 |
| CDY34794 | Canola | nucleus | 15.15 | 22.39 |
| Bra039233.1-P | Field mustard | nucleus | 15.15 | 22.39 |
| Bra020409.1-P | Field mustard | nucleus | 14.73 | 22.33 |
| CDY11846 | Canola | nucleus | 11.0 | 22.27 |
| AT5G57830.1 | Thale cress | nucleus | 17.84 | 22.22 |
| CDY32744 | Canola | nucleus | 16.8 | 22.13 |
| KRH37764 | Soybean | nucleus | 20.95 | 22.05 |
| CDY51277 | Canola | nucleus | 16.8 | 22.01 |
| Bra002693.1-P | Field mustard | nucleus | 16.8 | 22.01 |
| Bra002694.1-P | Field mustard | nucleus | 16.8 | 22.01 |
| CDY50792 | Canola | nucleus | 16.6 | 21.74 |
| AT2G24140.2 | Thale cress | nucleus | 14.52 | 21.6 |
| KRH12784 | Soybean | nucleus | 20.33 | 21.49 |
| AT4G30830.1 | Thale cress | nucleus | 15.56 | 20.66 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 18.67 | 20.64 |
| KRH55008 | Soybean | cytosol | 6.85 | 20.5 |
| Os08t0442350-01 | Rice | nucleus | 20.95 | 20.28 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 18.46 | 20.09 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 18.46 | 20.09 |
| Solyc11g020850.1.1 | Tomato | nucleus | 21.78 | 20.0 |
| GSMUA_Achr2P12800_001 | Banana | cytosol, nucleus, plasma membrane | 18.46 | 19.78 |
| CDX72271 | Canola | nucleus | 15.56 | 19.43 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 11.83 | 18.81 |
| CDY13389 | Canola | nucleus | 15.56 | 18.66 |
| OQU80548 | Sorghum | nucleus | 20.33 | 18.56 |
| GSMUA_Achr4P22730_001 | Banana | nucleus, plastid | 17.63 | 17.82 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 13.07 | 17.65 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 13.69 | 17.6 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 15.15 | 16.19 |
| Zm00001d032145_P001 | Maize | nucleus | 20.75 | 16.16 |
| GSMUA_Achr6P06580_001 | Banana | nucleus | 9.96 | 16.05 |
| Solyc12g009900.1.1 | Tomato | cytosol | 18.05 | 13.66 |
| PGSC0003DMT400020469 | Potato | cytosol | 17.84 | 12.39 |
| GSMUA_Achr3P17210_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 14.11 | 11.13 |
| GSMUA_Achr1P05380_001 | Banana | golgi, plasma membrane | 11.41 | 9.37 |
| GSMUA_AchrUn_... | Banana | golgi, vacuole | 11.83 | 8.93 |
| GSMUA_Achr4P17820_001 | Banana | golgi | 12.66 | 8.28 |
| GSMUA_Achr6P17030_001 | Banana | endoplasmic reticulum, golgi | 15.15 | 7.99 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane | 12.66 | 7.71 |
| CDY31127 | Canola | cytosol | 9.96 | 7.38 |
| GSMUA_Achr7P01610_001 | Banana | golgi, mitochondrion | 12.03 | 7.29 |
| GSMUA_Achr6P07650_001 | Banana | golgi, plasma membrane | 13.9 | 7.13 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.62 | 1.52 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P23940_001 | EnsemblPlants:GSMUA_Achr10T23940_001 | EnsemblPlantsGene:GSMUA_Achr10G23940_001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31422 | PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | SEG:seg | UniParc:UPI00029503FF |
| UniProt:M0RKW9 | MapMan:35.2 | : | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G23940_001]
Coordinates
chr10:-:28483698..28485739
Molecular Weight (calculated)
55207.8 Da
IEP (calculated)
5.152
GRAVY (calculated)
-0.687
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEREIAVTK EALHQYIIIR KLHMELDEER EASATAASEA LSMILKLQRE KAVEKMEARQ YKRMAEEKLH YAEQCLIILE EEMQRKGIEN SILKHQLQLY
101: KSRLLSIGIS DFELGDVVTC ADMSCGDGAF LEKTNLHGRM RRNFSLPSLK LGRLYSEIDR IDNNPLLPSW HSTWKIFGDC TDHLSDKNKK FSHLFQESAT
201: DDHNSEEANR RGNHDSSPGR MGQQTTSDSS RSSGEDSSSC SWYSAVTGDA SCHSKPGTKI HLDAECVVNS PFQAEEQVNT TESAELSVSY NQTESGKNLA
301: CVHDIFEVPE SDKYHVSSEP VEHFLEESIK ETMTYGVCED FMPQETVEFL YRDNYWLDRE FTCSHHGSQI SSPTCESNKM LTPRKGEMMN YNSVLVDSVN
401: RTCIMRNDFE HIKCQLQQIE NEKIMKMEDS ERNSEQLKLL RDIYEKLNSI ESHLKSSKSK KCPQHDESQL VSVIEAFLSF SI
101: KSRLLSIGIS DFELGDVVTC ADMSCGDGAF LEKTNLHGRM RRNFSLPSLK LGRLYSEIDR IDNNPLLPSW HSTWKIFGDC TDHLSDKNKK FSHLFQESAT
201: DDHNSEEANR RGNHDSSPGR MGQQTTSDSS RSSGEDSSSC SWYSAVTGDA SCHSKPGTKI HLDAECVVNS PFQAEEQVNT TESAELSVSY NQTESGKNLA
301: CVHDIFEVPE SDKYHVSSEP VEHFLEESIK ETMTYGVCED FMPQETVEFL YRDNYWLDRE FTCSHHGSQI SSPTCESNKM LTPRKGEMMN YNSVLVDSVN
401: RTCIMRNDFE HIKCQLQQIE NEKIMKMEDS ERNSEQLKLL RDIYEKLNSI ESHLKSSKSK KCPQHDESQL VSVIEAFLSF SI
001: MVERSRSFRI PGAETNDLRI ALYERKEVIE RLQEELNAER EASETSANEA MSMILRLQGE KAELAMEADQ YKRMVEEQMS HAEMSFALLE DVIYQKEIEV
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
101: TALAYQVEVY RSQLLSLGFN DLKSLDVKLQ EDDDQDENML KMNDFSLSDR SQTPSPELVT DLSIPEEKEV IEQSLESQKS SLDVYWEQIK KLNEQVKELT
201: GFRDSMRDQH RTSVSESRGE EDFASSSNFQ EVTQERKKEA KGLSKTTDDT MMIKVSKQTK MEKKPSKQTR DRSGKRNRAE YQAELQRLRQ RVERLERGKS
301: NTEPETSGVI KQEEISLLKE VKEELSSVQS SDVKKSLNTM ENLQPWVDPT IISVQEAMLY FWL
Arabidopsis Description
Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q1PE31]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.