Factsheet for GSMUA_Achr8P04680_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P26680_001	Banana	cytosol	56.0	69.31
GSMUA_Achr1P14210_001	Banana	cytosol	57.07	59.94
GSMUA_Achr3P15020_001	Banana	nucleus	71.47	59.42
Solyc11g045480.1.1	Tomato	mitochondrion	21.87	40.39
CDY07525	Canola	peroxisome	9.87	38.54
GSMUA_Achr2P12800_001	Banana	cytosol, nucleus, plasma membrane	44.53	37.11
Bra009206.1-P	Field mustard	nucleus	40.8	35.83
Bra028728.1-P	Field mustard	nucleus	38.67	35.63
KRH71751	Soybean	nucleus	46.4	35.51
KRH32933	Soybean	nucleus	45.87	35.1
PGSC0003DMT400022326	Potato	nucleus	46.13	34.88
KRH68055	Soybean	cytosol	43.2	34.62
VIT_08s0032g00720.t01	Wine grape	plastid	47.2	34.04
GSMUA_Achr4P22730_001	Banana	nucleus, plastid	43.2	33.96
PGSC0003DMT400072288	Potato	plastid	45.07	32.75
TraesCS4A01G159000.1	Wheat	cytosol	37.87	32.35
Bra034805.1-P	Field mustard	nucleus	37.33	31.32
AT5G06560.1	Thale cress	nucleus	42.4	30.7
Zm00001d023648_P003	Maize	plastid	38.67	30.59
OQU79118	Sorghum	plastid	19.47	30.04
TraesCS1B01G165300.1	Wheat	plastid	37.87	29.65
Zm00001d007503_P001	Maize	nucleus	36.0	29.61
Zm00001d033504_P001	Maize	nucleus	39.2	29.58
HORVU4Hr1G041430.2	Barley	cytosol	33.33	29.55
Zm00001d013658_P001	Maize	nucleus	39.2	29.46
KXG28744	Sorghum	cytosol	35.47	29.36
TraesCS1A01G147200.1	Wheat	plastid	37.33	29.23
OQU91257	Sorghum	nucleus	39.73	29.16
TraesCS1D01G145300.1	Wheat	cytosol	29.33	28.95
Os03t0650800-00	Rice	nucleus	38.13	28.6
Bra038684.1-P	Field mustard	nucleus	30.4	28.29
TraesCS5B01G373100.1	Wheat	nucleus	37.33	28.0
Os12t0488700-00	Rice	cytosol	37.6	27.81
AT3G11850.2	Thale cress	nucleus	37.33	27.78
TraesCS5D01G380300.1	Wheat	cytosol	28.27	26.63
CDY07526	Canola	nucleus	20.0	26.04
HORVU0Hr1G000300.2	Barley	cytosol	29.6	25.28
KRG96316	Soybean	cytosol	38.67	25.0
TraesCS5A01G370700.1	Wheat	nucleus	20.8	23.42
HORVU5Hr1G092270.4	Barley	cytosol, plastid	22.93	20.77
GSMUA_Achr6P06580_001	Banana	nucleus	12.8	16.05
GSMUA_Achr10P...	Banana	nucleus	17.6	13.69
GSMUA_Achr1P05380_001	Banana	golgi, plasma membrane	17.6	11.24
GSMUA_Achr3P17210_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	17.6	10.8
GSMUA_AchrUn_...	Banana	golgi, vacuole	16.53	9.72
GSMUA_Achr4P17820_001	Banana	golgi	18.13	9.23
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane	17.07	8.09
GSMUA_Achr7P01610_001	Banana	golgi, mitochondrion	15.73	7.41
GSMUA_Achr6P17030_001	Banana	endoplasmic reticulum, golgi	17.87	7.33
GSMUA_Achr6P07650_001	Banana	golgi, plasma membrane	18.13	7.23

Protein Annotations

EnsemblPlants:GSMUA_Achr8P04680_001	EnsemblPlants:GSMUA_Achr8T04680_001	EnsemblPlantsGene:GSMUA_Achr8G04680_001	InterPro:GTD-bd	InterPro:IPR007656	ncoils:Coil
PANTHER:PTHR31422	PANTHER:PTHR31422:SF0	PFAM:PF04576	PFscan:PS51775	SEG:seg	UniParc:UPI0002961CF0
UniProt:M0TMM1	MapMan:35.1	:	:	:	:

Description

Putative DUF593 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G04680_001]

Coordinates

chr8:+:3119951..3123559

Molecular Weight (calculated)

42190.4 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.513

Length

375 amino acids

Sequence
(BLAST)

001: MAWRLSLKRK LDERDAEARC LSCAGVGVAR VETEIEAMAL REALVNHQQS VQKLQAELEE ERSAAASAAT EAMLMILRLQ HEKAEAQMEA RQFKRLAEGK
101: MAHDQHEIAA LEDLLYKRDQ TVQSLSYEVR TYRHRLLSYG IGIDGGVPSS EPQTPDTDTA TAACSVPQFD LLHHGYPPSR CNGDDAANLD KYRSGPEVIK
201: GEEFSATMDC ASNSGGRHDM SDEVYTVAAV HGASEEYVST PRELRNRRDM AGRVEEAEIR KLYTRLQALD ADRESMRQTL ISLGTDMAQM VFLKQIAQQM
301: YKEVAPERKI VKKPLSFKGS SLISTIKSVI SFFWRKKSAR VKYTFGLSPT NVGLLLLLDK SSRMRQLRSL TRTQR

Best Arabidopsis Sequence Match ( AT3G54740.1 )
(BLAST)

001: MMLLRGSSDS SSSNAKILVE NECAALLEAL SSQRETVKDL HLELEEERNA AASAANETMS MILRLQREKA EIQMEARQFK MFAQEKMTHD QEKLSVLENL
101: LYEKEQAIEA LTYEVEAYKH RLLSYGVSEA EIHDQILGFG RDSSTVGFDV YPCEYTSLEC SVDENPSGPD GNFEIEEKVM VGQSPRWPYY DPNSPLGTAK
201: DIKGASFADS PMSSSSDRVY TIDSIHVGVS EVKIDDEPNK MSKGKLNGDH WNSPRYQEPF TTQQGVNEPD IEKLYTRLQA LEADRESLRQ IIVSMRTDKA
301: QLVLLKEIAQ HLTKETGATS RRNPVSKMPS LKVFSVVTVF KWIVSFVSWK RKARQNKYVY ELSANNMGML MILGEGSGTR RWRCLTSSHV

Arabidopsis Description

Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.