Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX67607 | Canola | peroxisome | 84.38 | 57.86 |
| CDY70407 | Canola | peroxisome | 72.22 | 56.37 |
| CDX78259 | Canola | nucleus | 68.06 | 48.28 |
| CDX73453 | Canola | nucleus | 68.75 | 47.83 |
| CDX76130 | Canola | cytosol | 65.28 | 47.24 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 57.99 | 44.06 |
| CDX70091 | Canola | nucleus | 35.07 | 23.65 |
| CDY14078 | Canola | nucleus | 31.6 | 23.58 |
| CDX98935 | Canola | nucleus | 32.29 | 22.79 |
| CDY04993 | Canola | nucleus | 31.6 | 22.2 |
| CDY08489 | Canola | nucleus | 28.82 | 21.45 |
| CDY01064 | Canola | nucleus | 32.99 | 21.3 |
| GSMUA_Achr3P15020_001 | Banana | nucleus | 32.99 | 21.06 |
| GSMUA_Achr8P04680_001 | Banana | cytosol, mitochondrion | 26.04 | 20.0 |
| GSMUA_Achr2P12800_001 | Banana | cytosol, nucleus, plasma membrane | 29.86 | 19.11 |
| CDY67532 | Canola | nucleus | 26.74 | 18.47 |
| GSMUA_Achr1P14210_001 | Banana | cytosol | 21.88 | 17.65 |
| GSMUA_Achr8P26680_001 | Banana | cytosol | 18.4 | 17.49 |
| GSMUA_Achr4P22730_001 | Banana | nucleus, plastid | 28.82 | 17.4 |
| Zm00001d033504_P001 | Maize | nucleus | 26.74 | 15.49 |
| OQU91257 | Sorghum | nucleus | 26.39 | 14.87 |
| CDX88641 | Canola | nucleus | 6.25 | 14.75 |
| TraesCS1A01G147200.1 | Wheat | plastid | 24.31 | 14.61 |
| TraesCS1B01G165300.1 | Wheat | plastid | 24.31 | 14.61 |
| Os03t0650800-00 | Rice | nucleus | 25.35 | 14.6 |
| KXG28744 | Sorghum | cytosol | 22.92 | 14.57 |
| Zm00001d023648_P003 | Maize | plastid | 23.96 | 14.56 |
| Zm00001d013658_P001 | Maize | nucleus | 25.0 | 14.43 |
| Zm00001d007503_P001 | Maize | nucleus | 22.22 | 14.04 |
| TraesCS5B01G373100.1 | Wheat | nucleus | 24.31 | 14.0 |
| TraesCS4A01G159000.1 | Wheat | cytosol | 21.18 | 13.9 |
| Os12t0488700-00 | Rice | cytosol | 24.31 | 13.81 |
| CDY47332 | Canola | extracellular, plasma membrane | 12.5 | 13.79 |
| CDY01114 | Canola | extracellular, plasma membrane | 12.5 | 13.79 |
| CDX68698 | Canola | cytosol | 13.54 | 13.27 |
| HORVU4Hr1G041430.2 | Barley | cytosol | 19.44 | 13.24 |
| HORVU0Hr1G000300.2 | Barley | cytosol | 20.14 | 13.21 |
| CDY02772 | Canola | nucleus | 16.67 | 13.11 |
| CDY50792 | Canola | nucleus | 16.67 | 13.04 |
| CDY28219 | Canola | cytosol | 13.19 | 12.93 |
| CDY09477 | Canola | nucleus | 8.33 | 12.9 |
| CDY51277 | Canola | nucleus | 16.32 | 12.77 |
| CDY34794 | Canola | nucleus | 14.24 | 12.58 |
| CDY32744 | Canola | nucleus | 15.97 | 12.57 |
| CDX76832 | Canola | nucleus | 13.89 | 12.42 |
| TraesCS1D01G145300.1 | Wheat | cytosol | 16.32 | 12.37 |
| CDX72271 | Canola | nucleus | 15.62 | 11.66 |
| CDX88643 | Canola | nucleus | 8.33 | 10.08 |
| TraesCS5D01G380300.1 | Wheat | cytosol | 13.89 | 10.05 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 18.06 | 9.98 |
| CDY13389 | Canola | nucleus | 13.89 | 9.95 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 17.71 | 9.79 |
| CDY11846 | Canola | nucleus | 7.99 | 9.66 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 18.4 | 9.58 |
| CDY68842 | Canola | vacuole | 18.06 | 9.24 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.54 | 7.63 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.54 | 7.53 |
| TraesCS5A01G370700.1 | Wheat | nucleus | 8.68 | 7.51 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 12.85 | 7.51 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 12.85 | 7.51 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.54 | 7.49 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.85 | 7.41 |
| Solyc11g045480.1.1 | Tomato | mitochondrion | 5.21 | 7.39 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 13.19 | 7.01 |
| HORVU5Hr1G092270.4 | Barley | cytosol, plastid | 10.07 | 7.0 |
| CDX96274 | Canola | mitochondrion | 17.36 | 6.79 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 12.85 | 6.72 |
| CDY11550 | Canola | mitochondrion | 17.36 | 6.27 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 14.58 | 6.19 |
| CDY31127 | Canola | cytosol | 13.54 | 6.0 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 14.24 | 5.99 |
| OQU79118 | Sorghum | plastid | 4.86 | 5.76 |
| CDY29652 | Canola | endoplasmic reticulum | 13.54 | 5.35 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 13.19 | 5.34 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 13.19 | 5.27 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 13.19 | 4.98 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 14.24 | 4.69 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 14.93 | 4.49 |
| CDX93536 | Canola | extracellular, vacuole | 14.93 | 4.46 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.69 | 1.01 |
| CDY07525 | Canola | peroxisome | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY07526 | EnsemblPlantsGene:GSBRNA2T00124574001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF0 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY07526 | ProteinID:CDY07526.1 | SEG:seg |
| UniParc:UPI0004EDBEC5 | UniProt:A0A078F2E1 | MapMan:35.1 | : | : | : |
Description
BnaC06g15380DBnaC06g15380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F2E1]
Coordinates
chrLK031979:-:362176..363073
Molecular Weight (calculated)
32123.6 Da
IEP (calculated)
4.251
GRAVY (calculated)
-0.505
Length
288 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSEQSFPSR DIVKCCDFVC NYSLGACTRT VKRKFNEEGN LMLLLSRGSS DSSSTARLLV ENECAALLED LSSQRKIVKD LHLELEEGRN PAASAANETM
101: LEILMEARQF KGFAEEKMTH DQEKLKVLEE LLYEIEQAIE ALSYEVEAYK DRLLSCGITE AEMHDQVLGF GRDSSTVGID VYPCEYTLKC SVDDENPSGP
201: DGNVEVMEKE MVGQSPYYDP NSPLEAAKDI KGTDSPMSCS SDRVYTIDSV HVGVSEVKID DEPSKISKGE LNGDHWHSPR YQESVVMT
101: LEILMEARQF KGFAEEKMTH DQEKLKVLEE LLYEIEQAIE ALSYEVEAYK DRLLSCGITE AEMHDQVLGF GRDSSTVGID VYPCEYTLKC SVDDENPSGP
201: DGNVEVMEKE MVGQSPYYDP NSPLEAAKDI KGTDSPMSCS SDRVYTIDSV HVGVSEVKID DEPSKISKGE LNGDHWHSPR YQESVVMT
001: MDSELSFSSR DVVNCCEYGC DYSLGACSSD PLARTVKRKF NEFKEGNNMM LLRGSSDSSS SNAKILVENE CAALLEALSS QRETVKDLHL ELEEERNAAA
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
101: SAANETMSMI LRLQREKAEI QMEARQFKMF AQEKMTHDQE KLSVLENLLY EKEQAIEALT YEVEAYKHRL LSYGVSEAEI HDQILGFGRD SSTVGFDVYP
201: CEYTSLECSV DENPSGPDGN FEIEEKVMVG QSPRWPYYDP NSPLGTAKDI KGASFADSPM SSSSDRVYTI DSIHVGVSEV KIDDEPNKMS KGKLNGDHWN
301: SPRYQEPFTT QQGVNEPDIE KLYTRLQALE ADRESLRQII VSMRTDKAQL VLLKEIAQHL TKETGATSRR NPVSKMPSLK VFSVVTVFKW IVSFVSWKRK
401: ARQNKYVYEL SANNMGMLMI LGEGSGTRRW RCLTSSHV
Arabidopsis Description
Uncharacterized protein T5N23_100 [Source:UniProtKB/TrEMBL;Acc:Q9M1S6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.