Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45396 | Canola | extracellular, golgi, vacuole | 94.92 | 96.49 |
| Bra015891.1-P | Field mustard | endoplasmic reticulum, golgi | 94.19 | 95.58 |
| AT1G74830.1 | Thale cress | extracellular, golgi, vacuole | 79.49 | 80.81 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 70.78 | 79.11 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 70.6 | 78.9 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 59.71 | 63.51 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 58.26 | 62.82 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 56.62 | 62.53 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 58.8 | 62.19 |
| Solyc12g027730.1.1 | Tomato | endoplasmic reticulum, extracellular, plasma membrane | 43.56 | 46.24 |
| PGSC0003DMT400030876 | Potato | endoplasmic reticulum, extracellular | 43.19 | 45.95 |
| KRH54475 | Soybean | endoplasmic reticulum | 46.28 | 42.36 |
| KRH63445 | Soybean | endoplasmic reticulum | 47.01 | 42.11 |
| PGSC0003DMT400062848 | Potato | golgi | 43.92 | 40.4 |
| PGSC0003DMT400083120 | Potato | endoplasmic reticulum | 43.74 | 40.3 |
| Solyc03g113600.2.1 | Tomato | golgi | 43.56 | 40.13 |
| VIT_17s0000g05320.t01 | Wine grape | endoplasmic reticulum, golgi | 45.19 | 40.1 |
| Solyc06g071190.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 45.19 | 38.97 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 9.8 | 27.27 |
| CDY09477 | Canola | nucleus | 8.17 | 24.19 |
| CDY47332 | Canola | extracellular, plasma membrane | 10.53 | 22.22 |
| CDY01114 | Canola | extracellular, plasma membrane | 10.53 | 22.22 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 24.14 | 19.44 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 23.41 | 19.0 |
| CDX88641 | Canola | nucleus | 3.81 | 17.21 |
| CDY14078 | Canola | nucleus | 11.98 | 17.1 |
| CDX96274 | Canola | mitochondrion | 22.69 | 16.98 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 21.6 | 16.5 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 21.23 | 16.46 |
| CDX98935 | Canola | nucleus | 11.62 | 15.69 |
| CDY29652 | Canola | endoplasmic reticulum | 20.69 | 15.64 |
| CDY04993 | Canola | nucleus | 11.62 | 15.61 |
| CDY11550 | Canola | mitochondrion | 22.32 | 15.41 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.32 | 15.33 |
| CDX70091 | Canola | nucleus | 11.8 | 15.22 |
| CDY70407 | Canola | peroxisome | 10.16 | 15.18 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 20.87 | 15.07 |
| CDX78259 | Canola | nucleus | 10.89 | 14.78 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 25.59 | 14.73 |
| CDY08489 | Canola | nucleus | 10.34 | 14.73 |
| CDX93536 | Canola | extracellular, vacuole | 25.59 | 14.63 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 9.98 | 14.51 |
| CDY34794 | Canola | nucleus | 8.53 | 14.42 |
| CDY67532 | Canola | nucleus | 10.89 | 14.39 |
| CDX76832 | Canola | nucleus | 8.35 | 14.29 |
| CDX67607 | Canola | peroxisome | 10.89 | 14.29 |
| CDX73453 | Canola | nucleus | 10.71 | 14.25 |
| CDY13389 | Canola | nucleus | 10.34 | 14.18 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 13.07 | 13.82 |
| CDX68698 | Canola | cytosol | 7.26 | 13.61 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 12.7 | 13.44 |
| CDY01064 | Canola | nucleus | 10.71 | 13.23 |
| CDX76130 | Canola | cytosol | 9.44 | 13.07 |
| CDX72271 | Canola | nucleus | 9.07 | 12.95 |
| CDY28219 | Canola | cytosol | 6.9 | 12.93 |
| CDY07526 | Canola | nucleus | 6.72 | 12.85 |
| CDY50792 | Canola | nucleus | 8.35 | 12.5 |
| CDY31127 | Canola | cytosol | 14.7 | 12.46 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 12.34 | 12.3 |
| CDY02772 | Canola | nucleus | 8.17 | 12.3 |
| CDY68842 | Canola | vacuole | 12.52 | 12.26 |
| CDY51277 | Canola | nucleus | 8.17 | 12.23 |
| CDY32744 | Canola | nucleus | 7.99 | 12.02 |
| CDX88643 | Canola | nucleus | 4.9 | 11.34 |
| CDY11846 | Canola | nucleus | 4.72 | 10.92 |
| CDY07525 | Canola | peroxisome | 1.27 | 7.29 |
Protein Annotations
| EnsemblPlants:CDX73116 | EnsemblPlantsGene:GSBRNA2T00103586001 | GO:A0A078C7S4 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil |
| PANTHER:PTHR31448 | PANTHER:PTHR31448:SF9 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX73116 | ProteinID:CDX73116.1 |
| SEG:seg | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004EE0695 | MapMan:20.2.4.3 | : |
Description
BnaC06g35640D
Coordinates
chrLK031797:-:2193665..2195446
Molecular Weight (calculated)
62779.0 Da
IEP (calculated)
4.460
GRAVY (calculated)
-0.476
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MITQLLCFFL FLFLLLQATM MFKRSFKTFV EQELGSFPKF LIYTVLEWIL ITALFVDGVL AFLSNQYARF FDLNAPCLLC TRIDHVLVPR DPHFYYNDSI
101: CDSHKKKVSS LAYCHVHKKL SEIKHMCEGC LLSFATEKES DCDTYKSLIG ILHKDLEVLI DDERDLPLGL KKQDDLVQTT THLIDYKTDS LKQHCSCCGE
201: LLKTKSEKFL KKNNSFLAPA PSPRVSYNKL SEINESEFKD FDVEERTPSF VRGGNKFFGV PLSDSAQNSP RWSVRSLRKP SLDKIEIPDS NGESILNQLK
301: KEVRLDKKSL IDLYMELDEE RSASAVAAYN AMAMITKLQA EKSAIQMEAL QYQRMMDEQA EYDQEALQSM SSDLAKKEEE FKELEAEFEA YRERYGCLTD
401: DEASGDEFLE EQDEFLEEHG NARADDDCQE TKPDSDFEDC SSNHEEDVEN IDQNRSCRSE ESGLLVQMKK SSEESTEVNG ASGEEEKAGS VSKEGIVKEL
501: SEITERLSAL QSDGELLKHI ADVSEGEAMI LQISQNLHML RSSFVAMPSE S
101: CDSHKKKVSS LAYCHVHKKL SEIKHMCEGC LLSFATEKES DCDTYKSLIG ILHKDLEVLI DDERDLPLGL KKQDDLVQTT THLIDYKTDS LKQHCSCCGE
201: LLKTKSEKFL KKNNSFLAPA PSPRVSYNKL SEINESEFKD FDVEERTPSF VRGGNKFFGV PLSDSAQNSP RWSVRSLRKP SLDKIEIPDS NGESILNQLK
301: KEVRLDKKSL IDLYMELDEE RSASAVAAYN AMAMITKLQA EKSAIQMEAL QYQRMMDEQA EYDQEALQSM SSDLAKKEEE FKELEAEFEA YRERYGCLTD
401: DEASGDEFLE EQDEFLEEHG NARADDDCQE TKPDSDFEDC SSNHEEDVEN IDQNRSCRSE ESGLLVQMKK SSEESTEVNG ASGEEEKAGS VSKEGIVKEL
501: SEITERLSAL QSDGELLKHI ADVSEGEAMI LQISQNLHML RSSFVAMPSE S
001: MYIQLLCFFL FLFLLLQATM SKRSFKKFVE QELGSLPHFL IYTVLEWSLI VFLFIDGVIA FLSNQFAKFF DLNIPCLLCT RIDHILVPRD PQFYYNESIC
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
101: DSHKKKVSSL AYCHVHKKLS EIKHMCEGCL LSFATEKDSD CDTYKSLIGI LHKDLELLID DERDLPLAFK KDDNLVQTTK NLVDYKTNNI KNDSLKQHCS
201: CCGELLKIKS EKLPKNNNSF LAPAPSPRVS HNKLSENESE FKDMDVDRTP SFVRGGNKFF GIPLSDSAQN SPRWSVRSLK KSVLNKTENA SDTTDPTGES
301: ILNQLKKEVR LDKKSLIDLY MELDEERSAS AVAANEAMAM ITRLQAEKAA VQMEALQYQR MMDEQAEYDQ EALQSMSSEL AKREEEMKEL EAEFEVYREK
401: YGCLTDQEDA REEFHKQNGN ASAYDDCQET KPVSDLAVSS SNQQENGENI DQNGQSKRSE ESTAENVVSA DEEKGSESKE GIVKELSEIT ERLSTLQSNG
501: DLLKHIADVL DVSEGEAILL QISQNLHMLR SFVAMPSESM NL
Arabidopsis Description
MYOB6Probable myosin-binding protein 6 [Source:UniProtKB/Swiss-Prot;Acc:F4HVS6]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.