Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032725.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 98.19 | 98.37 |
| CDY68842 | Canola | vacuole | 85.71 | 84.19 |
| AT4G13630.1 | Thale cress | extracellular, golgi | 70.34 | 68.37 |
| CDY47332 | Canola | extracellular, plasma membrane | 19.35 | 41.0 |
| CDY01114 | Canola | extracellular, plasma membrane | 19.35 | 41.0 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 31.46 | 33.4 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 31.28 | 33.21 |
| GSMUA_Achr6P06580_001 | Banana | nucleus | 15.55 | 28.76 |
| VIT_05s0029g00110.t01 | Wine grape | endoplasmic reticulum, golgi | 39.42 | 27.35 |
| GSMUA_Achr3P17210_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 27.67 | 25.04 |
| CDX88641 | Canola | nucleus | 5.24 | 23.77 |
| TraesCS2D01G272500.1 | Wheat | plastid | 20.43 | 23.3 |
| TraesCS2B01G291300.1 | Wheat | plastid | 20.25 | 23.09 |
| TraesCS2A01G273300.1 | Wheat | plastid | 20.07 | 22.89 |
| Zm00001d032786_P001 | Maize | plastid | 16.27 | 21.9 |
| Zm00001d014088_P001 | Maize | plastid | 19.17 | 21.41 |
| OQU91677 | Sorghum | endoplasmic reticulum, golgi | 18.08 | 20.83 |
| CDY09477 | Canola | nucleus | 6.69 | 19.89 |
| CDY70407 | Canola | peroxisome | 12.3 | 18.43 |
| CDY07526 | Canola | nucleus | 9.58 | 18.4 |
| CDX67607 | Canola | peroxisome | 13.74 | 18.1 |
| CDX78259 | Canola | nucleus | 13.02 | 17.73 |
| CDY14078 | Canola | nucleus | 12.3 | 17.62 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 11.93 | 17.41 |
| CDX73453 | Canola | nucleus | 13.02 | 17.39 |
| CDX76130 | Canola | cytosol | 12.3 | 17.09 |
| CDY08489 | Canola | nucleus | 11.93 | 17.05 |
| CDY28219 | Canola | cytosol | 9.04 | 17.01 |
| CDX68698 | Canola | cytosol | 8.86 | 16.67 |
| CDX98935 | Canola | nucleus | 12.3 | 16.67 |
| CDX70091 | Canola | nucleus | 12.84 | 16.63 |
| CDY04993 | Canola | nucleus | 12.3 | 16.59 |
| CDY34794 | Canola | nucleus | 9.76 | 16.56 |
| HORVU2Hr1G066690.6 | Barley | cytosol, mitochondrion | 13.2 | 16.48 |
| CDX76832 | Canola | nucleus | 9.58 | 16.46 |
| CDY13389 | Canola | nucleus | 11.39 | 15.67 |
| CDX72271 | Canola | nucleus | 10.85 | 15.54 |
| CDY01064 | Canola | nucleus | 12.48 | 15.47 |
| CDY67532 | Canola | nucleus | 11.57 | 15.35 |
| CDX88643 | Canola | nucleus | 6.51 | 15.13 |
| CDY32744 | Canola | nucleus | 9.76 | 14.75 |
| CDY11846 | Canola | nucleus | 6.33 | 14.71 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 13.02 | 14.6 |
| CDY02772 | Canola | nucleus | 9.58 | 14.48 |
| CDY51277 | Canola | nucleus | 9.58 | 14.4 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 12.84 | 14.4 |
| CDY50792 | Canola | nucleus | 9.4 | 14.13 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 12.3 | 13.31 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 11.75 | 13.03 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 11.93 | 12.74 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 11.93 | 12.67 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 12.3 | 12.55 |
| CDX96274 | Canola | mitochondrion | 16.64 | 12.5 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 12.3 | 12.34 |
| CDY11550 | Canola | mitochondrion | 16.46 | 11.4 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 13.02 | 10.53 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 12.84 | 10.46 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 11.57 | 8.88 |
| CDY29652 | Canola | endoplasmic reticulum | 11.57 | 8.78 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 11.21 | 8.72 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 11.39 | 8.26 |
| CDY31127 | Canola | cytosol | 9.4 | 8.0 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 12.12 | 7.67 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 2.71 | 7.58 |
| CDX93536 | Canola | extracellular, vacuole | 11.75 | 6.74 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 11.57 | 6.69 |
| CDY07525 | Canola | peroxisome | 0.9 | 5.21 |
Protein Annotations
| EnsemblPlants:CDY01147 | EnsemblPlantsGene:GSBRNA2T00111222001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF3 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY01147 | ProteinID:CDY01147.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EECE90 | MapMan:35.2 | : | : | : |
Description
BnaA04g06720D
Coordinates
chrLK031924:-:492561..494629
Molecular Weight (calculated)
61933.3 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.527
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCHEVKSWT FSGLVAAFLD LSVAFSLLCA SSLVYLTSKL LGVFGLTLPC PCDGLFSDKN KCFQETLVNL PVKKISSVQS SVISTSPFDS LLYKEANGGK
101: KRKGEPSRHV EFEKEVVFRT PEVENASCFD LLTSQSLKKG SFKVKSKRLS FYGLKNHCQS KHSPQSPAEE INHSLLVNSK DCGKDLEDVS LRKSVSLCSI
201: GCEDGGTGNN QPERTVSWAG EGTCTSPIEQ VLEEERASRA ALALELEKER NAAATAADEA LGMILRLQEE KASIEMEARQ YQRMIEEKSA FDAEEMSLLK
301: EILLRREREK HFLEKEVDTY RQMFLETEQR LPNTPDSEQP TESLDDSFGF DIFTNQMDNR ILDGEMKVNG VDEDQEIVTE QQEREEGTLL SKPVAESTKV
401: GEDSDDIDCC VHDIHVVKDE DNKVQLNVPL DHVVRDLKLD RSQSVLGTSY LLPPACPQGR RILSPNMRRN SMSAVDYERL KIESEVGLLR GRLRAVQKGR
501: EKISFSSKEQ SKSVLGDKTS RFWEARRSEP IDSSSPSSTM VKAMSMSLDL HSA
101: KRKGEPSRHV EFEKEVVFRT PEVENASCFD LLTSQSLKKG SFKVKSKRLS FYGLKNHCQS KHSPQSPAEE INHSLLVNSK DCGKDLEDVS LRKSVSLCSI
201: GCEDGGTGNN QPERTVSWAG EGTCTSPIEQ VLEEERASRA ALALELEKER NAAATAADEA LGMILRLQEE KASIEMEARQ YQRMIEEKSA FDAEEMSLLK
301: EILLRREREK HFLEKEVDTY RQMFLETEQR LPNTPDSEQP TESLDDSFGF DIFTNQMDNR ILDGEMKVNG VDEDQEIVTE QQEREEGTLL SKPVAESTKV
401: GEDSDDIDCC VHDIHVVKDE DNKVQLNVPL DHVVRDLKLD RSQSVLGTSY LLPPACPQGR RILSPNMRRN SMSAVDYERL KIESEVGLLR GRLRAVQKGR
501: EKISFSSKEQ SKSVLGDKTS RFWEARRSEP IDSSSPSSTM VKAMSMSLDL HSA
001: MRCQEVKSWT FKGLVAAFID LSVAFSLLCA SFIVYVTSKF LGLFGLDLPC PCDGLYSECF QESLRNLPVK KISSVQRSVK NRTPFDSILY NGGKKRKCER
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
101: RRVQLEDEVS STTPSVGKFE NKASGFDLLT AQSLKKGSFK VKSKRLSFHR SPYGFKNHYQ SCLGLKSFEG SYDENDPLLV NSNDSGKALE DVSLRKSVSL
201: SSVGCGVGEG ACSSPGMVQR TVEMSEQVLG EERAARASLA LELEKERNAA ASAADEALGM ILRLQEEKAS IEMEARQYQR MIEEKSAFDA EEMSILKEIL
301: LRREREKHFL EKEVDTYRQM FLETEQPHNT PDSKPAQIER LQTPQQITEP WDDMETVNVS SGFEIFTNQM DNTECDQSRS EPFDALSDIE LKEREEGETL
401: YAELVSRTSD IAVSKKLCED PHDIDCHVHD IHVVTDEDNK GQLNVPSDHA TQDLKLDRSQ SVSDTSYAFP QGKSNMSTNM RRNSMSAIDY ERLKIESEVG
501: LLRGRLRAVQ KGREKISFSS KDQSKSQVQR CGDKTSRFWE ARRSGHLDSS SPSSTMVKAM SMPLDLHSA
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT4G13630]
SUBAcon: [golgi,extracellular]
SUBAcon: [golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.