Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11846 | Canola | nucleus | 94.96 | 94.96 |
| CDX88641 | Canola | nucleus | 46.64 | 90.98 |
| Bra006798.1-P | Field mustard | nucleus | 99.16 | 77.12 |
| CDY02772 | Canola | nucleus | 76.89 | 50.0 |
| CDY32744 | Canola | nucleus | 76.47 | 49.73 |
| AT5G57830.1 | Thale cress | nucleus | 80.67 | 49.61 |
| CDY50792 | Canola | nucleus | 76.47 | 49.46 |
| CDY51277 | Canola | nucleus | 76.05 | 49.18 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 44.96 | 22.81 |
| CDY34794 | Canola | nucleus | 27.31 | 19.94 |
| CDX76832 | Canola | nucleus | 26.89 | 19.88 |
| PGSC0003DMT400028965 | Potato | nucleus | 36.55 | 19.21 |
| Solyc07g005910.2.1 | Tomato | nucleus | 36.55 | 19.21 |
| PGSC0003DMT400023950 | Potato | nucleus | 35.29 | 18.88 |
| CDX68698 | Canola | cytosol | 22.69 | 18.37 |
| CDY28219 | Canola | cytosol | 22.27 | 18.03 |
| CDX72271 | Canola | nucleus | 28.99 | 17.88 |
| CDY13389 | Canola | nucleus | 29.41 | 17.41 |
| KRH63109 | Soybean | nucleus | 33.61 | 17.35 |
| KRH72337 | Soybean | nucleus | 33.19 | 16.84 |
| KRH37764 | Soybean | nucleus | 31.51 | 16.38 |
| KRH55008 | Soybean | cytosol | 10.92 | 16.15 |
| KRH03013 | Soybean | nucleus | 31.93 | 16.03 |
| KRH12784 | Soybean | nucleus | 30.67 | 16.01 |
| Solyc11g020850.1.1 | Tomato | nucleus | 33.61 | 15.24 |
| CDY09477 | Canola | nucleus | 10.92 | 13.98 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 21.43 | 13.53 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 21.01 | 13.19 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 21.01 | 13.19 |
| CDY14078 | Canola | nucleus | 21.01 | 12.95 |
| CDY04993 | Canola | nucleus | 21.43 | 12.44 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 15.13 | 12.41 |
| Zm00001d024102_P002 | Maize | nucleus | 18.07 | 12.15 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 21.01 | 11.68 |
| GSMUA_Achr10P... | Banana | nucleus | 22.69 | 11.2 |
| OQU80230 | Sorghum | cytosol | 18.49 | 11.0 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 19.75 | 10.78 |
| Os08t0442350-01 | Rice | nucleus | 21.85 | 10.44 |
| CDY07525 | Canola | peroxisome | 4.2 | 10.42 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 19.33 | 10.38 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.34 | 10.34 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.34 | 10.34 |
| CDY70407 | Canola | peroxisome | 15.97 | 10.3 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 18.91 | 10.16 |
| CDY01064 | Canola | nucleus | 18.91 | 10.09 |
| CDX76130 | Canola | cytosol | 16.81 | 10.05 |
| OQU80548 | Sorghum | nucleus | 22.27 | 10.04 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 15.97 | 10.03 |
| CDX67607 | Canola | peroxisome | 17.65 | 10.0 |
| CDX98935 | Canola | nucleus | 16.81 | 9.8 |
| CDX70091 | Canola | nucleus | 17.23 | 9.6 |
| CDY08489 | Canola | nucleus | 15.55 | 9.56 |
| CDX73453 | Canola | nucleus | 16.39 | 9.42 |
| CDX78259 | Canola | nucleus | 15.97 | 9.36 |
| CDY67532 | Canola | nucleus | 16.39 | 9.35 |
| Solyc12g009900.1.1 | Tomato | cytosol | 24.79 | 9.26 |
| PGSC0003DMT400020469 | Potato | cytosol | 26.05 | 8.93 |
| CDY07526 | Canola | nucleus | 10.08 | 8.33 |
| Zm00001d032145_P001 | Maize | nucleus | 21.01 | 8.08 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 15.13 | 6.51 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 13.03 | 6.21 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.45 | 6.18 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.45 | 6.14 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.03 | 6.07 |
| CDY68842 | Canola | vacuole | 14.29 | 6.04 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 12.61 | 5.76 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 12.18 | 5.57 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 10.92 | 5.27 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 11.76 | 5.17 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 14.71 | 5.15 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 14.71 | 5.12 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 10.5 | 5.07 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 11.34 | 4.9 |
| CDX96274 | Canola | mitochondrion | 14.29 | 4.62 |
| CDY11550 | Canola | mitochondrion | 14.29 | 4.26 |
| CDY31127 | Canola | cytosol | 10.5 | 3.85 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 10.5 | 3.52 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 10.5 | 3.47 |
| CDY29652 | Canola | endoplasmic reticulum | 10.5 | 3.43 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 10.5 | 3.28 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 11.34 | 3.09 |
| CDX93536 | Canola | extracellular, vacuole | 12.18 | 3.01 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 11.76 | 2.93 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX88643 | EnsemblPlantsGene:GSBRNA2T00148682001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDX88643 | ProteinID:CDX88643.1 | UniParc:UPI0004EF1C55 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g10060D
Coordinates
chrLK031856:-:328223..329263
Molecular Weight (calculated)
27413.7 Da
IEP (calculated)
5.947
GRAVY (calculated)
-0.616
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MILRLQGEKA ALEMEASQYK RMSEEKMCHA ETSLTLFEDL IYRKEMEMAS LEFQKGVESS SLSPRQDLSA CWEEIRRIDD HVREVSESRD VAKGSKWSLL
101: RCGSISHALV SQVSNTVLES AKSDVSSIME MIKNPERFSA SDEVPRTKES LTIISEERNV GGKMVSSDYK RKVSKPPKDT SIEAEHMSLL KEIREQISEM
201: QSEMRSLRSE LHKTRLVSHR EEDRAINSIQ EVMIHFWL
101: RCGSISHALV SQVSNTVLES AKSDVSSIME MIKNPERFSA SDEVPRTKES LTIISEERNV GGKMVSSDYK RKVSKPPKDT SIEAEHMSLL KEIREQISEM
201: QSEMRSLRSE LHKTRLVSHR EEDRAINSIQ EVMIHFWL
001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.