Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra002693.1-P | Field mustard | nucleus | 99.46 | 99.46 |
| Bra002694.1-P | Field mustard | nucleus | 97.83 | 97.83 |
| CDY50792 | Canola | nucleus | 95.92 | 95.92 |
| AT5G57830.1 | Thale cress | nucleus | 85.33 | 81.14 |
| CDY32744 | Canola | nucleus | 79.08 | 79.51 |
| CDY02772 | Canola | nucleus | 78.8 | 79.23 |
| CDX88641 | Canola | nucleus | 25.54 | 77.05 |
| CDY11846 | Canola | nucleus | 49.73 | 76.89 |
| CDX88643 | Canola | nucleus | 49.18 | 76.05 |
| VIT_11s0037g00610.t01 | Wine grape | nucleus | 45.65 | 35.82 |
| CDY28219 | Canola | cytosol | 26.63 | 33.33 |
| CDX68698 | Canola | cytosol | 26.36 | 32.99 |
| CDY34794 | Canola | nucleus | 29.08 | 32.82 |
| CDX76832 | Canola | nucleus | 28.53 | 32.61 |
| Solyc07g005910.2.1 | Tomato | nucleus | 39.95 | 32.45 |
| PGSC0003DMT400023950 | Potato | nucleus | 38.86 | 32.13 |
| PGSC0003DMT400028965 | Potato | nucleus | 39.4 | 32.01 |
| KRH55008 | Soybean | cytosol | 13.32 | 30.43 |
| KRH63109 | Soybean | nucleus | 35.6 | 28.42 |
| KRH37764 | Soybean | nucleus | 34.51 | 27.73 |
| CDX72271 | Canola | nucleus | 28.8 | 27.46 |
| KRH72337 | Soybean | nucleus | 34.78 | 27.29 |
| KRH03013 | Soybean | nucleus | 35.05 | 27.22 |
| KRH12784 | Soybean | nucleus | 33.15 | 26.75 |
| Solyc11g020850.1.1 | Tomato | nucleus | 37.77 | 26.48 |
| CDY13389 | Canola | nucleus | 27.99 | 25.62 |
| TraesCS5A01G400200.1 | Wheat | nucleus | 22.28 | 21.64 |
| TraesCS5B01G405000.1 | Wheat | nucleus | 22.01 | 21.49 |
| TraesCS5D01G410200.1 | Wheat | nucleus | 21.74 | 21.11 |
| Os08t0269000-01 | Rice | cytosol, golgi, nucleus | 16.03 | 20.34 |
| CDY14078 | Canola | nucleus | 21.2 | 20.21 |
| CDY04993 | Canola | nucleus | 21.74 | 19.51 |
| TraesCS7D01G282800.1 | Wheat | nucleus | 23.1 | 19.5 |
| Zm00001d024102_P002 | Maize | nucleus | 18.48 | 19.21 |
| TraesCS7B01G199800.1 | Wheat | nucleus | 22.83 | 18.96 |
| TraesCS7A01G285400.1 | Wheat | nucleus | 22.83 | 18.96 |
| Os08t0442350-01 | Rice | nucleus | 25.27 | 18.67 |
| HORVU5Hr1G097200.5 | Barley | cytosol | 21.2 | 18.22 |
| OQU80548 | Sorghum | nucleus | 24.73 | 17.23 |
| CDX70091 | Canola | nucleus | 19.84 | 17.1 |
| CDX76130 | Canola | cytosol | 18.48 | 17.09 |
| CDY08489 | Canola | nucleus | 17.93 | 17.05 |
| GSMUA_Achr10P... | Banana | nucleus | 22.01 | 16.8 |
| OQU80230 | Sorghum | cytosol | 18.21 | 16.75 |
| CDX98935 | Canola | nucleus | 18.48 | 16.67 |
| CDY09477 | Canola | nucleus | 8.42 | 16.67 |
| CDY02887 | Canola | cytosol, nucleus, peroxisome | 17.12 | 16.62 |
| CDY07526 | Canola | nucleus | 12.77 | 16.32 |
| CDY67532 | Canola | nucleus | 18.48 | 16.31 |
| CDY01064 | Canola | nucleus | 19.29 | 15.92 |
| CDX78259 | Canola | nucleus | 17.39 | 15.76 |
| CDY47332 | Canola | extracellular, plasma membrane | 11.14 | 15.71 |
| CDY01114 | Canola | extracellular, plasma membrane | 11.14 | 15.71 |
| CDX67607 | Canola | peroxisome | 17.66 | 15.48 |
| CDX73453 | Canola | nucleus | 17.12 | 15.22 |
| Solyc12g009900.1.1 | Tomato | cytosol | 25.82 | 14.91 |
| CDY70407 | Canola | peroxisome | 14.67 | 14.63 |
| PGSC0003DMT400020469 | Potato | cytosol | 26.9 | 14.27 |
| Zm00001d032145_P001 | Maize | nucleus | 21.47 | 12.76 |
| CDY21687 | Canola | endoplasmic reticulum, vacuole | 13.86 | 9.98 |
| CDY26705 | Canola | endoplasmic reticulum, plasma membrane, plastid | 13.59 | 9.65 |
| CDY19266 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 13.59 | 9.6 |
| CDY01147 | Canola | extracellular, golgi, vacuole | 14.4 | 9.58 |
| CDX81908 | Canola | endoplasmic reticulum, vacuole | 12.77 | 9.42 |
| CDY68842 | Canola | vacuole | 14.4 | 9.41 |
| CDX89779 | Canola | endoplasmic reticulum, extracellular | 13.32 | 9.4 |
| CDY07525 | Canola | peroxisome | 2.45 | 9.38 |
| CDY18267 | Canola | endoplasmic reticulum, plasma membrane | 13.04 | 9.21 |
| CDX85859 | Canola | extracellular, plasma membrane, vacuole | 11.41 | 8.52 |
| CDY45396 | Canola | extracellular, golgi, vacuole | 12.5 | 8.49 |
| CDX68162 | Canola | extracellular, plasma membrane, vacuole | 11.14 | 8.32 |
| CDX73116 | Canola | extracellular, golgi, vacuole | 12.23 | 8.17 |
| CDY16985 | Canola | endoplasmic reticulum, golgi | 14.4 | 7.81 |
| CDX69426 | Canola | endoplasmic reticulum, golgi, plastid | 14.4 | 7.75 |
| CDX96274 | Canola | mitochondrion | 15.22 | 7.61 |
| CDY11550 | Canola | mitochondrion | 15.22 | 7.02 |
| CDY31127 | Canola | cytosol | 10.87 | 6.15 |
| CDY10753 | Canola | endoplasmic reticulum, plasma membrane | 11.41 | 5.91 |
| CDY47125 | Canola | endoplasmic reticulum, plasma membrane | 11.41 | 5.83 |
| CDY29652 | Canola | endoplasmic reticulum | 11.41 | 5.76 |
| CDY67896 | Canola | endoplasmic reticulum, vacuole | 11.41 | 5.5 |
| CDX93536 | Canola | extracellular, vacuole | 12.5 | 4.77 |
| CDX95032 | Canola | endoplasmic reticulum, vacuole | 12.23 | 4.7 |
| CDY32134 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 11.14 | 4.69 |
| CDY31126 | Canola | endoplasmic reticulum, mitochondrion, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY51277 | EnsemblPlantsGene:GSBRNA2T00003072001 | InterPro:GTD-bd | InterPro:IPR007656 | ncoils:Coil | PANTHER:PTHR31422 |
| PANTHER:PTHR31422:SF1 | PFAM:PF04576 | PFscan:PS51775 | ProteinID:CDY51277 | ProteinID:CDY51277.1 | SEG:seg |
| UniParc:UPI0004EF376D | UniProt:A0A078IMX7 | MapMan:35.1 | : | : | : |
Description
BnaA10g11710DBnaA10g11710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMX7]
Coordinates
chrLK032981:+:35109..36970
Molecular Weight (calculated)
42028.9 Da
IEP (calculated)
4.967
GRAVY (calculated)
-0.665
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVERTMSLGI GLNGESSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLALF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVVENRF PENLIFFGDT SRLNQKKKMK RNLSSPFDGM TSERRLLLSD NEGFEEKKGL ESSLSPREDL STYWEQIRRI
201: DDHVREISES RDAPKESKRP LIKRESVSHA LVSQVSNTIL ESAKSDVNTI MEMLKNPDHK VSAKDESPNV QDIFEVPRTK ESLFIISEEE EHEERSGRGK
301: LLSKPPRDTS IKAEHMSLLK EIREQLNGMQ SEMRSLRSEL HLTPPVSSHH EEDGVLNSVQ EAMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVVENRF PENLIFFGDT SRLNQKKKMK RNLSSPFDGM TSERRLLLSD NEGFEEKKGL ESSLSPREDL STYWEQIRRI
201: DDHVREISES RDAPKESKRP LIKRESVSHA LVSQVSNTIL ESAKSDVNTI MEMLKNPDHK VSAKDESPNV QDIFEVPRTK ESLFIISEEE EHEERSGRGK
301: LLSKPPRDTS IKAEHMSLLK EIREQLNGMQ SEMRSLRSEL HLTPPVSSHH EEDGVLNSVQ EAMIHFWL
001: MVERTMSLGV GGNGETSGVR ETMWAQQELL QKINQELDAE REASSSAASE ALSMILRLQG EKAALEMEAS QYKRMAEEKM CHAETSLVLF EDLIYQKEME
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
101: IASLEFQVQA YRCKLLSLGC SDPAVIENKF PETLIFSGEN SRGNQKRKMK RNLSSPFDGI SSERSLLLSD VNGESFEEKK GLVESSSVSP REDLNAYWEQ
201: IRRIDEHVRE ISDSRDTQKA SKFPLIRRES ISHALVSQVS NTILESAKSD VSSIMEMMKN PERFSVKDAS LETPILSPKN VQDIFEVPRT KESLTIISEE
301: EEAEERNVRG KMVTSNYDRK VSKPPRDTSI KGEHLSLLKE IREQLNVMQS EMRSLRSELH HQSKPVSNPE EDLVLNSIQE AMIHFWL
Arabidopsis Description
Protein of unknown function, DUF593 [Source:TAIR;Acc:AT5G57830]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.